Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 SNORA79-201ENST00000408376 140 ntBASIC0.27□□□□□ -2.37
FOXC2Q99958 MIR1257-201ENST00000408490 117 ntBASIC0.27□□□□□ -2.37
FOXC2Q99958 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.27□□□□□ -2.37
FOXC2Q99958 AL121914.1-201ENST00000450188 156 ntBASIC0.27□□□□□ -2.37
FOXC2Q99958 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
FOXC2Q99958 SCARNA15.1-201ENST00000516384 125 ntBASIC0.27□□□□□ -2.37
FOXC2Q99958 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
FOXC2Q99958 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.27□□□□□ -2.37
FOXC2Q99958 MIR3152-201ENST00000579801 74 ntBASIC0.27□□□□□ -2.37
FOXC2Q99958 RNU2-4P-201ENST00000606190 192 ntBASIC0.27□□□□□ -2.37
FOXC2Q99958 AC021613.1-201ENST00000623880 111 ntBASIC0.27□□□□□ -2.37
FOXC2Q99958 MIR302B-201ENST00000362188 73 ntBASIC0.26□□□□□ -2.37
FOXC2Q99958 MIRLET7D-201ENST00000362263 87 ntBASIC0.26□□□□□ -2.37
FOXC2Q99958 Y_RNA.435-201ENST00000384095 112 ntBASIC0.26□□□□□ -2.37
FOXC2Q99958 Y_RNA.478-201ENST00000384358 107 ntBASIC0.26□□□□□ -2.37
FOXC2Q99958 U8.15-201ENST00000390947 134 ntBASIC0.26□□□□□ -2.37
FOXC2Q99958 RNU6-327P-201ENST00000516270 127 ntBASIC0.26□□□□□ -2.37
FOXC2Q99958 RNU6-1258P-201ENST00000516911 111 ntBASIC0.26□□□□□ -2.37
FOXC2Q99958 AL596211.1-201ENST00000569873 2277 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 SNORA22.1-201ENST00000362701 134 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 Y_RNA.75-201ENST00000362927 97 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 RNA5SP517-201ENST00000364724 117 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 RNU6-275P-201ENST00000364910 107 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 Y_RNA.350-201ENST00000365409 98 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 RNU6-643P-201ENST00000384018 107 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 Y_RNA.476-201ENST00000384347 108 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 RNU6-364P-201ENST00000384387 107 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 RNU6-918P-201ENST00000391219 106 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 RNU6-493P-201ENST00000391321 108 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 SEPT7P4-201ENST00000437076 306 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 RNU6-1149P-201ENST00000516810 97 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 RNA5SP94-201ENST00000516917 108 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 RNU6-448P-201ENST00000517052 107 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 AC141846.1-201ENST00000568348 142 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 AL162730.1-201ENST00000605734 292 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 AC062037.2-201ENST00000610137 73 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 MIR6718-201ENST00000616153 80 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 AC078938.1-201ENST00000620993 318 ntBASIC0.25□□□□□ -2.37
FOXC2Q99958 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
FOXC2Q99958 Y_RNA.60-201ENST00000362831 98 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 SNORD44.1-201ENST00000363202 61 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 SNORD27-201ENST00000363981 72 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 RNU6-923P-201ENST00000364753 107 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 RNU6-949P-201ENST00000384040 107 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 MIR1912-201ENST00000410389 80 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 Y_RNA.797-201ENST00000515977 94 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 RNU6-1023P-201ENST00000516137 106 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 RNA5SP236-201ENST00000516169 116 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 MIR3678-201ENST00000578455 94 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 MIR3128-201ENST00000581957 66 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 MIR3149-201ENST00000584629 83 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 AL627230.5-201ENST00000619807 58 ntBASIC0.24□□□□□ -2.37
FOXC2Q99958 RNU6-349P-201ENST00000362402 107 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 Y_RNA.65-201ENST00000362846 100 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 SNORD118-201ENST00000363593 134 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 MIR518A1-201ENST00000385068 85 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 SNORD93-201ENST00000408813 74 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 RNU6-1086P-201ENST00000410930 100 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 RNU4-71P-201ENST00000516258 113 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 Y_RNA.757-201ENST00000578934 114 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 MIR4491-201ENST00000581087 68 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 MIR4636-201ENST00000582271 80 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 AC092634.7-201ENST00000621022 103 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 uc_338.16-201ENST00000621804 95 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 U6.106-201ENST00000636360 105 ntBASIC0.23□□□□□ -2.37
FOXC2Q99958 MTND5P32-201ENST00000560711 1802 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 SNORA36.1-201ENST00000363424 132 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 Y_RNA.162-201ENST00000363683 102 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 Y_RNA.170-201ENST00000363746 110 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 Y_RNA.182-201ENST00000363880 111 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 RNY1P13-201ENST00000365030 105 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 Y_RNA.477-201ENST00000384352 108 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 RNU4-83P-201ENST00000410863 133 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 SNORA40.8-201ENST00000411034 126 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 RNU6-1045P-201ENST00000516321 107 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 RNU6-765P-201ENST00000516916 99 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 RNU6-111P-201ENST00000517179 105 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 MIR4503-201ENST00000582187 83 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 MIR6082-201ENST00000613604 109 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 U4.1-201ENST00000620349 87 ntBASIC0.22□□□□□ -2.37
FOXC2Q99958 Y_RNA.13-201ENST00000362403 112 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 SNORD115-2-201ENST00000362842 82 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 Y_RNA.193-201ENST00000363979 102 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 SNORA25.7-201ENST00000364375 127 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 SNORD115-20-201ENST00000365099 82 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 Y_RNA.447-201ENST00000384184 113 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 RNU6-679P-201ENST00000391003 106 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 MIR1302-3-201ENST00000408128 138 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 RNA5SP144-201ENST00000410846 116 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 Y_RNA.617-201ENST00000410920 90 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 RNU5E-9P-201ENST00000411164 104 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 MTND3P2-201ENST00000438452 342 ntBASIC0.21□□□□□ -2.38
FOXC2Q99958 RNU6-893P-201ENST00000458841 100 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms