Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 RNU4-36P-201ENST00000364294 144 ntBASIC1.54□□□□□ -2.16
FOXRED1Q96CU9 MIR504-201ENST00000385065 83 ntBASIC1.54□□□□□ -2.16
FOXRED1Q96CU9 RNU6-1165P-201ENST00000410119 107 ntBASIC1.54□□□□□ -2.16
FOXRED1Q96CU9 AC003989.2-201ENST00000440224 169 ntBASIC1.54□□□□□ -2.16
FOXRED1Q96CU9 SNORD67.1-201ENST00000516618 108 ntBASIC1.54□□□□□ -2.16
FOXRED1Q96CU9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
FOXRED1Q96CU9 SNORD48-201ENST00000364953 64 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 RNY1P13-201ENST00000365030 105 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 RNU6-32P-201ENST00000383948 107 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 RNU6-13P-201ENST00000384248 107 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 RNU6-12P-201ENST00000384604 107 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 RNU6-41P-201ENST00000384741 107 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 MIR206-201ENST00000384872 86 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 MIR563-201ENST00000385080 79 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 MRPL35P3-201ENST00000421557 364 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 RNU6-1018P-201ENST00000516577 106 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 MIR4694-201ENST00000578534 80 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 MIR3613-201ENST00000579844 87 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 SNORA4-201ENST00000584302 138 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 MIR6740-201ENST00000618268 113 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 AL512310.12-203ENST00000640543 90 ntBASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
FOXRED1Q96CU9 Y_RNA.10-201ENST00000362371 110 ntBASIC1.52□□□□□ -2.17
FOXRED1Q96CU9 Y_RNA.168-201ENST00000363740 102 ntBASIC1.52□□□□□ -2.17
FOXRED1Q96CU9 RNU6-654P-201ENST00000364373 107 ntBASIC1.52□□□□□ -2.17
FOXRED1Q96CU9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.52□□□□□ -2.17
FOXRED1Q96CU9 RNU6-949P-201ENST00000384040 107 ntBASIC1.52□□□□□ -2.17
FOXRED1Q96CU9 MT-TF-201ENST00000387314 71 ntBASIC1.52□□□□□ -2.17
FOXRED1Q96CU9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.52□□□□□ -2.17
FOXRED1Q96CU9 AL591704.2-201ENST00000421658 181 ntBASIC1.52□□□□□ -2.17
FOXRED1Q96CU9 RNU7-137P-201ENST00000516788 62 ntBASIC1.52□□□□□ -2.17
FOXRED1Q96CU9 DEFB131E-201ENST00000532329 154 ntBASIC1.52□□□□□ -2.17
FOXRED1Q96CU9 AC141557.1-201ENST00000540982 400 ntBASIC1.52□□□□□ -2.17
FOXRED1Q96CU9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.52□□□□□ -2.17
FOXRED1Q96CU9 AC104984.5-201ENST00000586878 94 ntBASIC1.52□□□□□ -2.17
FOXRED1Q96CU9 RNY3P2-201ENST00000362918 102 ntBASIC1.51□□□□□ -2.17
FOXRED1Q96CU9 RNU6-865P-201ENST00000364772 107 ntBASIC1.51□□□□□ -2.17
FOXRED1Q96CU9 RNU6-580P-201ENST00000365159 107 ntBASIC1.51□□□□□ -2.17
FOXRED1Q96CU9 Y_RNA.328-201ENST00000365208 113 ntBASIC1.51□□□□□ -2.17
FOXRED1Q96CU9 Y_RNA.360-201ENST00000365512 102 ntBASIC1.51□□□□□ -2.17
FOXRED1Q96CU9 SNORA80D-201ENST00000384488 135 ntBASIC1.51□□□□□ -2.17
FOXRED1Q96CU9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.51□□□□□ -2.17
FOXRED1Q96CU9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.51□□□□□ -2.17
FOXRED1Q96CU9 RNU6-295P-201ENST00000516901 104 ntBASIC1.51□□□□□ -2.17
FOXRED1Q96CU9 AC133485.1-201ENST00000567176 124 ntBASIC1.51□□□□□ -2.17
FOXRED1Q96CU9 Y_RNA.98-201ENST00000363109 102 ntBASIC1.5□□□□□ -2.17
FOXRED1Q96CU9 RNA5SP363-201ENST00000365072 115 ntBASIC1.5□□□□□ -2.17
FOXRED1Q96CU9 SNORA2B-201ENST00000384583 137 ntBASIC1.5□□□□□ -2.17
FOXRED1Q96CU9 Y_RNA.544-201ENST00000384650 113 ntBASIC1.5□□□□□ -2.17
FOXRED1Q96CU9 U8.13-201ENST00000390842 128 ntBASIC1.5□□□□□ -2.17
FOXRED1Q96CU9 SNORA26.9-201ENST00000391322 122 ntBASIC1.5□□□□□ -2.17
FOXRED1Q96CU9 MIR18B-201ENST00000454574 71 ntBASIC1.5□□□□□ -2.17
FOXRED1Q96CU9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.5□□□□□ -2.17
FOXRED1Q96CU9 SNORD113.3-201ENST00000364630 78 ntBASIC1.49□□□□□ -2.17
FOXRED1Q96CU9 Y_RNA.448-201ENST00000384185 108 ntBASIC1.49□□□□□ -2.17
FOXRED1Q96CU9 Y_RNA.495-201ENST00000384435 112 ntBASIC1.49□□□□□ -2.17
FOXRED1Q96CU9 MIR605-201ENST00000385078 83 ntBASIC1.49□□□□□ -2.17
FOXRED1Q96CU9 RNU6-910P-201ENST00000390844 107 ntBASIC1.49□□□□□ -2.17
FOXRED1Q96CU9 RNU6-679P-201ENST00000391003 106 ntBASIC1.49□□□□□ -2.17
FOXRED1Q96CU9 RNA5SP95-201ENST00000410319 137 ntBASIC1.49□□□□□ -2.17
FOXRED1Q96CU9 RPS29P11-201ENST00000496507 171 ntBASIC1.49□□□□□ -2.17
FOXRED1Q96CU9 RNU6-970P-201ENST00000516312 107 ntBASIC1.49□□□□□ -2.17
FOXRED1Q96CU9 AC096720.1-201ENST00000604441 183 ntBASIC1.49□□□□□ -2.17
FOXRED1Q96CU9 MIR6715A-201ENST00000615929 79 ntBASIC1.49□□□□□ -2.17
FOXRED1Q96CU9 AC012676.2-201ENST00000619258 186 ntBASIC1.49□□□□□ -2.17
FOXRED1Q96CU9 MIR30D-201ENST00000362283 70 ntBASIC1.48□□□□□ -2.17
FOXRED1Q96CU9 RNU6-1313P-201ENST00000362622 102 ntBASIC1.48□□□□□ -2.17
FOXRED1Q96CU9 RNU6-1099P-201ENST00000363533 107 ntBASIC1.48□□□□□ -2.17
FOXRED1Q96CU9 MIR9-3-201ENST00000385084 90 ntBASIC1.48□□□□□ -2.17
FOXRED1Q96CU9 RNU6-168P-201ENST00000516189 101 ntBASIC1.48□□□□□ -2.17
FOXRED1Q96CU9 SNORA70.22-201ENST00000517160 124 ntBASIC1.48□□□□□ -2.17
FOXRED1Q96CU9 MIR6845-201ENST00000613182 61 ntBASIC1.48□□□□□ -2.17
FOXRED1Q96CU9 AC105081.1-201ENST00000617727 106 ntBASIC1.48□□□□□ -2.17
FOXRED1Q96CU9 Y_RNA.818-201ENST00000618813 71 ntBASIC1.48□□□□□ -2.17
FOXRED1Q96CU9 RNU6-832P-201ENST00000363319 107 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 Y_RNA.377-201ENST00000365644 108 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 MIR577-201ENST00000385196 96 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 RNU6-1321P-201ENST00000390905 107 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 SNORA75.2-201ENST00000391138 150 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 SNORA75.3-201ENST00000391231 150 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 SNORD111-201ENST00000408139 94 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 MIR1289-2-201ENST00000408360 111 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 Y_RNA.601-201ENST00000410500 113 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 RNU7-48P-201ENST00000458875 63 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 AC108729.3-201ENST00000513484 108 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 RNU6-904P-201ENST00000516206 101 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 RNU6-548P-201ENST00000517083 115 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 MIR7843-201ENST00000622274 79 ntBASIC1.47□□□□□ -2.17
FOXRED1Q96CU9 SNORD38.2-201ENST00000384470 69 ntBASIC1.46□□□□□ -2.18
FOXRED1Q96CU9 SNORA40.18-201ENST00000391200 128 ntBASIC1.46□□□□□ -2.18
FOXRED1Q96CU9 RNU7-90P-201ENST00000459216 62 ntBASIC1.46□□□□□ -2.18
FOXRED1Q96CU9 RNU7-21P-201ENST00000459430 62 ntBASIC1.46□□□□□ -2.18
FOXRED1Q96CU9 AL442128.1-201ENST00000615151 90 ntBASIC1.46□□□□□ -2.18
FOXRED1Q96CU9 AC084768.2-201ENST00000622736 221 ntBASIC1.46□□□□□ -2.18
FOXRED1Q96CU9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms