Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 Y_RNA.470-201ENST00000384307 117 ntBASIC1.61□□□□□ -2.15
RTF1Q92541 SNORD116-21-201ENST00000384507 92 ntBASIC1.61□□□□□ -2.15
RTF1Q92541 MT-TI-201ENST00000387365 69 ntBASIC1.61□□□□□ -2.15
RTF1Q92541 RNU4-69P-201ENST00000410677 143 ntBASIC1.61□□□□□ -2.15
RTF1Q92541 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.61□□□□□ -2.15
RTF1Q92541 AC068338.1-201ENST00000565567 176 ntBASIC1.61□□□□□ -2.15
RTF1Q92541 MIR4679-2-201ENST00000578358 77 ntBASIC1.61□□□□□ -2.15
RTF1Q92541 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RTF1Q92541 RNU6-215P-201ENST00000365169 102 ntBASIC1.6□□□□□ -2.15
RTF1Q92541 RNU6-880P-201ENST00000384526 107 ntBASIC1.6□□□□□ -2.15
RTF1Q92541 AC244023.1-201ENST00000426884 112 ntBASIC1.6□□□□□ -2.15
RTF1Q92541 RPS29P23-201ENST00000458635 123 ntBASIC1.6□□□□□ -2.15
RTF1Q92541 MIR4264-201ENST00000583520 66 ntBASIC1.6□□□□□ -2.15
RTF1Q92541 AC242498.1-201ENST00000604134 111 ntBASIC1.6□□□□□ -2.15
RTF1Q92541 Y_RNA.116-201ENST00000363292 103 ntBASIC1.59□□□□□ -2.15
RTF1Q92541 RNU6-1325P-201ENST00000364905 105 ntBASIC1.59□□□□□ -2.15
RTF1Q92541 RNU6-429P-201ENST00000384582 108 ntBASIC1.59□□□□□ -2.15
RTF1Q92541 MIR548A1-201ENST00000385041 97 ntBASIC1.59□□□□□ -2.15
RTF1Q92541 RNU6-613P-201ENST00000410412 108 ntBASIC1.59□□□□□ -2.15
RTF1Q92541 AC007012.1-201ENST00000567192 175 ntBASIC1.59□□□□□ -2.15
RTF1Q92541 AP000753.3-201ENST00000604083 169 ntBASIC1.59□□□□□ -2.15
RTF1Q92541 MIR6129-201ENST00000616087 109 ntBASIC1.59□□□□□ -2.15
RTF1Q92541 MIR6516-201ENST00000630554 81 ntBASIC1.59□□□□□ -2.15
RTF1Q92541 MIR377-201ENST00000362145 69 ntBASIC1.58□□□□□ -2.16
RTF1Q92541 MIR548D2-201ENST00000384955 97 ntBASIC1.58□□□□□ -2.16
RTF1Q92541 AC048334.1-201ENST00000477975 159 ntBASIC1.58□□□□□ -2.16
RTF1Q92541 MIR548AE2-201ENST00000583456 67 ntBASIC1.58□□□□□ -2.16
RTF1Q92541 SNORD20-201ENST00000384550 80 ntBASIC1.57□□□□□ -2.16
RTF1Q92541 SNORD12C-201ENST00000386307 89 ntBASIC1.57□□□□□ -2.16
RTF1Q92541 SNORA31.2-201ENST00000516019 134 ntBASIC1.57□□□□□ -2.16
RTF1Q92541 RNU6-589P-201ENST00000516485 107 ntBASIC1.57□□□□□ -2.16
RTF1Q92541 RNU7-6P-201ENST00000516845 62 ntBASIC1.57□□□□□ -2.16
RTF1Q92541 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.57□□□□□ -2.16
RTF1Q92541 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
RTF1Q92541 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
RTF1Q92541 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
RTF1Q92541 Y_RNA.35-201ENST00000362601 101 ntBASIC1.56□□□□□ -2.16
RTF1Q92541 SNORD115-19-201ENST00000363098 82 ntBASIC1.56□□□□□ -2.16
RTF1Q92541 SNORD115-18-201ENST00000363293 82 ntBASIC1.56□□□□□ -2.16
RTF1Q92541 SNORD115-17-201ENST00000364612 82 ntBASIC1.56□□□□□ -2.16
RTF1Q92541 SNORA18-201ENST00000384416 132 ntBASIC1.56□□□□□ -2.16
RTF1Q92541 SNORD77B-201ENST00000391112 67 ntBASIC1.56□□□□□ -2.16
RTF1Q92541 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.56□□□□□ -2.16
RTF1Q92541 snoU13.2-201ENST00000459201 104 ntBASIC1.56□□□□□ -2.16
RTF1Q92541 RNU6-919P-201ENST00000516731 104 ntBASIC1.56□□□□□ -2.16
RTF1Q92541 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.56□□□□□ -2.16
RTF1Q92541 SEPT14P17-201ENST00000617978 177 ntBASIC1.56□□□□□ -2.16
RTF1Q92541 AC087741.2-201ENST00000619415 172 ntBASIC1.56□□□□□ -2.16
RTF1Q92541 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
RTF1Q92541 Y_RNA.281-201ENST00000364774 94 ntBASIC1.55□□□□□ -2.16
RTF1Q92541 RNU6-1086P-201ENST00000410930 100 ntBASIC1.55□□□□□ -2.16
RTF1Q92541 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.55□□□□□ -2.16
RTF1Q92541 RNU6-412P-201ENST00000516434 106 ntBASIC1.55□□□□□ -2.16
RTF1Q92541 Y_RNA.709-201ENST00000516952 92 ntBASIC1.55□□□□□ -2.16
RTF1Q92541 RNU7-35P-201ENST00000517174 62 ntBASIC1.55□□□□□ -2.16
RTF1Q92541 Y_RNA.362-201ENST00000365518 110 ntBASIC1.54□□□□□ -2.16
RTF1Q92541 RNU6-342P-201ENST00000384521 104 ntBASIC1.54□□□□□ -2.16
RTF1Q92541 MIR7-2-201ENST00000384970 110 ntBASIC1.54□□□□□ -2.16
RTF1Q92541 RNU6-580P-201ENST00000365159 107 ntBASIC1.53□□□□□ -2.16
RTF1Q92541 MIR563-201ENST00000385080 79 ntBASIC1.53□□□□□ -2.16
RTF1Q92541 MIR1276-201ENST00000408707 83 ntBASIC1.53□□□□□ -2.16
RTF1Q92541 AC063976.4-201ENST00000421971 163 ntBASIC1.53□□□□□ -2.16
RTF1Q92541 RPL39P34-201ENST00000477141 156 ntBASIC1.53□□□□□ -2.16
RTF1Q92541 RNA5SP102-201ENST00000516865 106 ntBASIC1.53□□□□□ -2.16
RTF1Q92541 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RTF1Q92541 AL589743.1-201ENST00000551932 2712 ntBASIC1.52□□□□□ -2.17
RTF1Q92541 Y_RNA.344-201ENST00000365381 112 ntBASIC1.52□□□□□ -2.17
RTF1Q92541 SNORA32-201ENST00000384072 121 ntBASIC1.52□□□□□ -2.17
RTF1Q92541 MIR588-201ENST00000384900 83 ntBASIC1.52□□□□□ -2.17
RTF1Q92541 MIR489-201ENST00000384923 84 ntBASIC1.52□□□□□ -2.17
RTF1Q92541 MIR150-201ENST00000385048 84 ntBASIC1.52□□□□□ -2.17
RTF1Q92541 RNA5SP237-201ENST00000410414 113 ntBASIC1.52□□□□□ -2.17
RTF1Q92541 MIR1270-201ENST00000459320 83 ntBASIC1.52□□□□□ -2.17
RTF1Q92541 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.52□□□□□ -2.17
RTF1Q92541 AL662814.1-201ENST00000617364 121 ntBASIC1.52□□□□□ -2.17
RTF1Q92541 Y_RNA.85-201ENST00000363014 111 ntBASIC1.51□□□□□ -2.17
RTF1Q92541 Y_RNA.168-201ENST00000363740 102 ntBASIC1.51□□□□□ -2.17
RTF1Q92541 RNU6-654P-201ENST00000364373 107 ntBASIC1.51□□□□□ -2.17
RTF1Q92541 Y_RNA.363-201ENST00000365529 113 ntBASIC1.51□□□□□ -2.17
RTF1Q92541 SNORA80D-201ENST00000384488 135 ntBASIC1.51□□□□□ -2.17
RTF1Q92541 RNY4P18-201ENST00000391107 89 ntBASIC1.51□□□□□ -2.17
RTF1Q92541 AL035461.1-201ENST00000421490 332 ntBASIC1.51□□□□□ -2.17
RTF1Q92541 AL591704.2-201ENST00000421658 181 ntBASIC1.51□□□□□ -2.17
RTF1Q92541 RNU7-62P-201ENST00000458856 62 ntBASIC1.51□□□□□ -2.17
RTF1Q92541 MIR6740-201ENST00000618268 113 ntBASIC1.51□□□□□ -2.17
RTF1Q92541 AL035470.1-201ENST00000622571 220 ntBASIC1.51□□□□□ -2.17
RTF1Q92541 MIR26B-201ENST00000362251 77 ntBASIC1.5□□□□□ -2.17
RTF1Q92541 Y_RNA.49-201ENST00000362714 112 ntBASIC1.5□□□□□ -2.17
RTF1Q92541 Y_RNA.224-201ENST00000364308 111 ntBASIC1.5□□□□□ -2.17
RTF1Q92541 Y_RNA.549-201ENST00000384657 102 ntBASIC1.5□□□□□ -2.17
RTF1Q92541 RNU6-205P-201ENST00000390858 107 ntBASIC1.5□□□□□ -2.17
RTF1Q92541 SNORA75.2-201ENST00000391138 150 ntBASIC1.5□□□□□ -2.17
RTF1Q92541 SNORA75.3-201ENST00000391231 150 ntBASIC1.5□□□□□ -2.17
RTF1Q92541 RNU7-79P-201ENST00000516082 62 ntBASIC1.5□□□□□ -2.17
RTF1Q92541 AC141846.1-201ENST00000568348 142 ntBASIC1.5□□□□□ -2.17
RTF1Q92541 MIR4295-201ENST00000585286 85 ntBASIC1.5□□□□□ -2.17
RTF1Q92541 Y_RNA.309-201ENST00000365046 111 ntBASIC1.49□□□□□ -2.17
RTF1Q92541 RNU6-1237P-201ENST00000384777 107 ntBASIC1.49□□□□□ -2.17
RTF1Q92541 RNU6-910P-201ENST00000390844 107 ntBASIC1.49□□□□□ -2.17
RTF1Q92541 SNORD12-201ENST00000391002 90 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms