Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RNU7-104P-201ENST00000459398 79 ntBASIC-0.68□□□□□ -2.52
CLHC1Q8NHS4 RNU6-976P-201ENST00000516086 111 ntBASIC-0.68□□□□□ -2.52
CLHC1Q8NHS4 MIR4263-201ENST00000584745 83 ntBASIC-0.68□□□□□ -2.52
CLHC1Q8NHS4 MIR1302-2-201ENST00000607096 138 ntBASIC-0.68□□□□□ -2.52
CLHC1Q8NHS4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.68□□□□□ -2.52
CLHC1Q8NHS4 snoU18.1-201ENST00000629629 71 ntBASIC-0.68□□□□□ -2.52
CLHC1Q8NHS4 MIR655-201ENST00000362159 97 ntBASIC-0.69□□□□□ -2.52
CLHC1Q8NHS4 RNU6-290P-201ENST00000365212 101 ntBASIC-0.69□□□□□ -2.52
CLHC1Q8NHS4 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.69□□□□□ -2.52
CLHC1Q8NHS4 SNORD75.1-201ENST00000408373 60 ntBASIC-0.69□□□□□ -2.52
CLHC1Q8NHS4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.69□□□□□ -2.52
CLHC1Q8NHS4 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.69□□□□□ -2.52
CLHC1Q8NHS4 SNORA27.4-201ENST00000516650 95 ntBASIC-0.69□□□□□ -2.52
CLHC1Q8NHS4 AL365205.2-201ENST00000594586 68 ntBASIC-0.69□□□□□ -2.52
CLHC1Q8NHS4 SNORA63.7-201ENST00000365579 123 ntBASIC-0.7□□□□□ -2.52
CLHC1Q8NHS4 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.7□□□□□ -2.52
CLHC1Q8NHS4 RNU6-811P-201ENST00000384069 107 ntBASIC-0.7□□□□□ -2.52
CLHC1Q8NHS4 RNU6-662P-201ENST00000384253 104 ntBASIC-0.7□□□□□ -2.52
CLHC1Q8NHS4 RNU6-876P-201ENST00000391295 104 ntBASIC-0.7□□□□□ -2.52
CLHC1Q8NHS4 SNORD110-201ENST00000408189 75 ntBASIC-0.7□□□□□ -2.52
CLHC1Q8NHS4 MIR3129-201ENST00000581095 76 ntBASIC-0.7□□□□□ -2.52
CLHC1Q8NHS4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.7□□□□□ -2.52
CLHC1Q8NHS4 AC084368.1-201ENST00000620935 65 ntBASIC-0.7□□□□□ -2.52
CLHC1Q8NHS4 U6.109-201ENST00000636749 87 ntBASIC-0.7□□□□□ -2.52
CLHC1Q8NHS4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.71□□□□□ -2.52
CLHC1Q8NHS4 MIR196A2-201ENST00000385189 110 ntBASIC-0.71□□□□□ -2.52
CLHC1Q8NHS4 RNU4-63P-201ENST00000411313 118 ntBASIC-0.71□□□□□ -2.52
CLHC1Q8NHS4 MTND4P19-201ENST00000446659 478 ntBASIC-0.71□□□□□ -2.52
CLHC1Q8NHS4 SNORA25.13-201ENST00000516395 103 ntBASIC-0.71□□□□□ -2.52
CLHC1Q8NHS4 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.71□□□□□ -2.52
CLHC1Q8NHS4 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.71□□□□□ -2.52
CLHC1Q8NHS4 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.71□□□□□ -2.52
CLHC1Q8NHS4 MIR548H5-201ENST00000580314 60 ntBASIC-0.71□□□□□ -2.52
CLHC1Q8NHS4 MIR4788-201ENST00000639104 80 ntBASIC-0.71□□□□□ -2.52
CLHC1Q8NHS4 UBE2WP1-201ENST00000362030 340 ntBASIC-0.72□□□□□ -2.52
CLHC1Q8NHS4 SNORA25.1-201ENST00000362326 128 ntBASIC-0.72□□□□□ -2.52
CLHC1Q8NHS4 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.72□□□□□ -2.52
CLHC1Q8NHS4 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.72□□□□□ -2.52
CLHC1Q8NHS4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.72□□□□□ -2.52
CLHC1Q8NHS4 AC244250.2-201ENST00000418731 148 ntBASIC-0.72□□□□□ -2.52
CLHC1Q8NHS4 AC006210.1-201ENST00000424882 111 ntBASIC-0.72□□□□□ -2.52
CLHC1Q8NHS4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.72□□□□□ -2.52
CLHC1Q8NHS4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.72□□□□□ -2.52
CLHC1Q8NHS4 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.72□□□□□ -2.52
CLHC1Q8NHS4 AC098479.1-201ENST00000609225 154 ntBASIC-0.72□□□□□ -2.52
CLHC1Q8NHS4 RNU6-509P-201ENST00000363519 107 ntBASIC-0.73□□□□□ -2.53
CLHC1Q8NHS4 RNU6-449P-201ENST00000383914 107 ntBASIC-0.73□□□□□ -2.53
CLHC1Q8NHS4 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.73□□□□□ -2.53
CLHC1Q8NHS4 AC096720.1-201ENST00000604441 183 ntBASIC-0.73□□□□□ -2.53
CLHC1Q8NHS4 RNU7-10P-201ENST00000607194 63 ntBASIC-0.73□□□□□ -2.53
CLHC1Q8NHS4 MIR6507-201ENST00000613630 70 ntBASIC-0.73□□□□□ -2.53
CLHC1Q8NHS4 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.74□□□□□ -2.53
CLHC1Q8NHS4 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.74□□□□□ -2.53
CLHC1Q8NHS4 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.74□□□□□ -2.53
CLHC1Q8NHS4 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.74□□□□□ -2.53
CLHC1Q8NHS4 SNORA53-201ENST00000391141 249 ntBASIC-0.74□□□□□ -2.53
CLHC1Q8NHS4 BX276092.1-201ENST00000427368 251 ntBASIC-0.74□□□□□ -2.53
CLHC1Q8NHS4 RNU7-70P-201ENST00000516941 66 ntBASIC-0.74□□□□□ -2.53
CLHC1Q8NHS4 AL356055.1-201ENST00000602528 446 ntBASIC-0.74□□□□□ -2.53
CLHC1Q8NHS4 AC037487.3-201ENST00000606668 112 ntBASIC-0.74□□□□□ -2.53
CLHC1Q8NHS4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.74□□□□□ -2.53
CLHC1Q8NHS4 FTX_2.1-201ENST00000618816 94 ntBASIC-0.74□□□□□ -2.53
CLHC1Q8NHS4 MIR1302-1-201ENST00000637932 143 ntBASIC-0.74□□□□□ -2.53
CLHC1Q8NHS4 AC112487.2-201ENST00000637950 304 ntBASIC-0.74□□□□□ -2.53
CLHC1Q8NHS4 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.75□□□□□ -2.53
CLHC1Q8NHS4 RNU4-70P-201ENST00000384579 139 ntBASIC-0.75□□□□□ -2.53
CLHC1Q8NHS4 MT-TT-201ENST00000387460 66 ntBASIC-0.75□□□□□ -2.53
CLHC1Q8NHS4 AC098614.3-201ENST00000438957 440 ntBASIC-0.75□□□□□ -2.53
CLHC1Q8NHS4 snoU13.11-201ENST00000459219 104 ntBASIC-0.75□□□□□ -2.53
CLHC1Q8NHS4 SNORD19B-201ENST00000459623 84 ntBASIC-0.75□□□□□ -2.53
CLHC1Q8NHS4 SCARNA15-202ENST00000516881 127 ntBASIC-0.75□□□□□ -2.53
CLHC1Q8NHS4 NAMPTP3-201ENST00000569273 224 ntBASIC-0.75□□□□□ -2.53
CLHC1Q8NHS4 AL590491.3-201ENST00000610731 82 ntBASIC-0.75□□□□□ -2.53
CLHC1Q8NHS4 AC090574.1-201ENST00000623186 233 ntBASIC-0.75□□□□□ -2.53
CLHC1Q8NHS4 SNORD115-2-201ENST00000362842 82 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 RNA5SP205-201ENST00000364653 136 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 RNU6-865P-201ENST00000364772 107 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 RNY1P2-201ENST00000364820 117 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 SNORD115-20-201ENST00000365099 82 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 RNU6-211P-201ENST00000384047 107 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 RNU6-429P-201ENST00000384582 108 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 MIR616-201ENST00000385293 97 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 RNA5SP484-201ENST00000458857 111 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 RNU7-137P-201ENST00000516788 62 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 AL132765.2-201ENST00000610812 351 ntBASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.76□□□□□ -2.53
CLHC1Q8NHS4 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.77□□□□□ -2.53
CLHC1Q8NHS4 MIR516B1-201ENST00000385211 90 ntBASIC-0.77□□□□□ -2.53
CLHC1Q8NHS4 MT-TQ-201ENST00000387372 72 ntBASIC-0.77□□□□□ -2.53
CLHC1Q8NHS4 AL606845.1-201ENST00000404881 255 ntBASIC-0.77□□□□□ -2.53
CLHC1Q8NHS4 RNU6-121P-201ENST00000410525 99 ntBASIC-0.77□□□□□ -2.53
CLHC1Q8NHS4 RNA5SP67-201ENST00000516422 131 ntBASIC-0.77□□□□□ -2.53
CLHC1Q8NHS4 RNU6-570P-201ENST00000517051 105 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms