Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 SNORA40.13-201ENST00000516379 120 ntBASIC1.83□□□□□ -2.12
SYNE4Q8N205 AC103810.8-201ENST00000607347 118 ntBASIC1.83□□□□□ -2.12
SYNE4Q8N205 AC243994.1-201ENST00000618627 109 ntBASIC1.83□□□□□ -2.12
SYNE4Q8N205 MIR6717-201ENST00000622747 73 ntBASIC1.83□□□□□ -2.12
SYNE4Q8N205 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE4Q8N205 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE4Q8N205 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.82□□□□□ -2.12
SYNE4Q8N205 Y_RNA.205-201ENST00000364128 113 ntBASIC1.82□□□□□ -2.12
SYNE4Q8N205 Y_RNA.354-201ENST00000365448 111 ntBASIC1.82□□□□□ -2.12
SYNE4Q8N205 MIR194-1-201ENST00000384892 85 ntBASIC1.82□□□□□ -2.12
SYNE4Q8N205 MIR577-201ENST00000385196 96 ntBASIC1.82□□□□□ -2.12
SYNE4Q8N205 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.82□□□□□ -2.12
SYNE4Q8N205 MIR4285-201ENST00000581001 85 ntBASIC1.82□□□□□ -2.12
SYNE4Q8N205 RNU6-1099P-201ENST00000363533 107 ntBASIC1.81□□□□□ -2.12
SYNE4Q8N205 RNU6-294P-201ENST00000364999 102 ntBASIC1.81□□□□□ -2.12
SYNE4Q8N205 SNORA32-201ENST00000384072 121 ntBASIC1.81□□□□□ -2.12
SYNE4Q8N205 RNU6-342P-201ENST00000384521 104 ntBASIC1.81□□□□□ -2.12
SYNE4Q8N205 Y_RNA.544-201ENST00000384650 113 ntBASIC1.81□□□□□ -2.12
SYNE4Q8N205 RNU6-679P-201ENST00000391003 106 ntBASIC1.81□□□□□ -2.12
SYNE4Q8N205 AL161935.2-201ENST00000414627 60 ntBASIC1.81□□□□□ -2.12
SYNE4Q8N205 AC090844.1-201ENST00000422019 156 ntBASIC1.81□□□□□ -2.12
SYNE4Q8N205 MTATP8P2-201ENST00000435212 202 ntBASIC1.81□□□□□ -2.12
SYNE4Q8N205 AC091304.10-201ENST00000641554 121 ntBASIC1.81□□□□□ -2.12
SYNE4Q8N205 SNORD115-2-201ENST00000362842 82 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 RNY3P2-201ENST00000362918 102 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 Y_RNA.78-201ENST00000362970 110 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 SNORD115-20-201ENST00000365099 82 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 SNORA1.2-201ENST00000365189 134 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 Y_RNA.342-201ENST00000365352 113 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 Y_RNA.360-201ENST00000365512 102 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 Y_RNA.388-201ENST00000383919 113 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 RNU6-1307P-201ENST00000391012 103 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 RNU4-69P-201ENST00000410677 143 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 JTBP1-201ENST00000441314 247 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 RNU7-73P-201ENST00000458743 63 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 RNU6-795P-201ENST00000516323 103 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 SNORA72.7-201ENST00000516349 94 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 RNA5SP33-201ENST00000516687 98 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 SNORA74.3-201ENST00000517108 154 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 AC012493.3-201ENST00000604494 112 ntBASIC1.8□□□□□ -2.12
SYNE4Q8N205 RNU6-363P-201ENST00000362895 105 ntBASIC1.79□□□□□ -2.12
SYNE4Q8N205 RNU4-67P-201ENST00000364569 141 ntBASIC1.79□□□□□ -2.12
SYNE4Q8N205 RNU6-1113P-201ENST00000384348 107 ntBASIC1.79□□□□□ -2.12
SYNE4Q8N205 MIR520E-201ENST00000384867 87 ntBASIC1.79□□□□□ -2.12
SYNE4Q8N205 MIR1912-201ENST00000410389 80 ntBASIC1.79□□□□□ -2.12
SYNE4Q8N205 SNORA7.5-201ENST00000410672 110 ntBASIC1.79□□□□□ -2.12
SYNE4Q8N205 AC107297.1-201ENST00000459991 176 ntBASIC1.79□□□□□ -2.12
SYNE4Q8N205 RNU7-53P-201ENST00000516705 60 ntBASIC1.79□□□□□ -2.12
SYNE4Q8N205 SNORA77B-201ENST00000578179 125 ntBASIC1.79□□□□□ -2.12
SYNE4Q8N205 AC012531.4-201ENST00000616509 177 ntBASIC1.79□□□□□ -2.12
SYNE4Q8N205 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE4Q8N205 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SYNE4Q8N205 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.78□□□□□ -2.12
SYNE4Q8N205 RNU6-1123P-201ENST00000362347 106 ntBASIC1.78□□□□□ -2.12
SYNE4Q8N205 Y_RNA.155-201ENST00000363632 101 ntBASIC1.78□□□□□ -2.12
SYNE4Q8N205 SNORA1.1-201ENST00000364671 133 ntBASIC1.78□□□□□ -2.12
SYNE4Q8N205 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SYNE4Q8N205 RPS29P1-201ENST00000465274 159 ntBASIC1.78□□□□□ -2.12
SYNE4Q8N205 RNU7-41P-201ENST00000515917 61 ntBASIC1.78□□□□□ -2.12
SYNE4Q8N205 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.78□□□□□ -2.12
SYNE4Q8N205 MIR8055-201ENST00000610739 97 ntBASIC1.78□□□□□ -2.12
SYNE4Q8N205 MALAT1.1-201ENST00000618249 95 ntBASIC1.78□□□□□ -2.12
SYNE4Q8N205 Y_RNA.818-201ENST00000618813 71 ntBASIC1.78□□□□□ -2.12
SYNE4Q8N205 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.78□□□□□ -2.12
SYNE4Q8N205 MIR598-201ENST00000384868 97 ntBASIC1.77□□□□□ -2.13
SYNE4Q8N205 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SYNE4Q8N205 DEFB131E-201ENST00000532329 154 ntBASIC1.77□□□□□ -2.13
SYNE4Q8N205 MIR548AO-201ENST00000579992 96 ntBASIC1.77□□□□□ -2.13
SYNE4Q8N205 MIR6078-201ENST00000611069 100 ntBASIC1.77□□□□□ -2.13
SYNE4Q8N205 MIR8065-201ENST00000620577 100 ntBASIC1.77□□□□□ -2.13
SYNE4Q8N205 AC008133.2-201ENST00000624540 351 ntBASIC1.77□□□□□ -2.13
SYNE4Q8N205 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
SYNE4Q8N205 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SYNE4Q8N205 Y_RNA.107-201ENST00000363190 121 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 RNU6-832P-201ENST00000363319 107 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 SNORD114-27-201ENST00000363766 70 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 RNU1-93P-201ENST00000364704 169 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 Y_RNA.430-201ENST00000384081 110 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 SNORA70.7-201ENST00000384159 133 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 Y_RNA.537-201ENST00000384626 109 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 MIR320A-201ENST00000385302 82 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 RNU6-733P-201ENST00000410759 104 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 RNY4P29-201ENST00000410801 97 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 AC005908.1-201ENST00000468701 347 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 RNU7-61P-201ENST00000515897 61 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 RNU6-158P-201ENST00000517104 100 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 MIR4764-201ENST00000580680 88 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 AC062037.1-201ENST00000605302 128 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 MIR8074-201ENST00000615081 81 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 AL442128.1-201ENST00000615151 90 ntBASIC1.76□□□□□ -2.13
SYNE4Q8N205 Y_RNA.247-201ENST00000364500 92 ntBASIC1.75□□□□□ -2.13
SYNE4Q8N205 Y_RNA.290-201ENST00000364879 114 ntBASIC1.75□□□□□ -2.13
SYNE4Q8N205 Y_RNA.507-201ENST00000384500 99 ntBASIC1.75□□□□□ -2.13
SYNE4Q8N205 SCARNA23-201ENST00000516060 130 ntBASIC1.75□□□□□ -2.13
SYNE4Q8N205 RNU6-162P-201ENST00000516228 103 ntBASIC1.75□□□□□ -2.13
SYNE4Q8N205 RNU6-970P-201ENST00000516312 107 ntBASIC1.75□□□□□ -2.13
SYNE4Q8N205 RNU6-521P-201ENST00000516663 105 ntBASIC1.75□□□□□ -2.13
SYNE4Q8N205 RNU6-844P-201ENST00000517175 102 ntBASIC1.75□□□□□ -2.13
SYNE4Q8N205 MIR4694-201ENST00000578534 80 ntBASIC1.75□□□□□ -2.13
SYNE4Q8N205 RNU6-409P-201ENST00000384114 104 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms