Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RNU6-768P-201ENST00000384683 107 ntBASIC0.64□□□□□ -2.31
NPHP3Q7Z494 MIR563-201ENST00000385080 79 ntBASIC0.64□□□□□ -2.31
NPHP3Q7Z494 MIR520H-201ENST00000385126 88 ntBASIC0.64□□□□□ -2.31
NPHP3Q7Z494 RNU1-119P-201ENST00000391122 165 ntBASIC0.64□□□□□ -2.31
NPHP3Q7Z494 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
NPHP3Q7Z494 MIR30D-201ENST00000362283 70 ntBASIC0.64□□□□□ -2.31
NPHP3Q7Z494 RNU6-1082P-201ENST00000364574 107 ntBASIC0.64□□□□□ -2.31
NPHP3Q7Z494 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
NPHP3Q7Z494 Y_RNA.401-201ENST00000383965 117 ntBASIC0.64□□□□□ -2.31
NPHP3Q7Z494 snosnR66.1-201ENST00000391095 99 ntBASIC0.64□□□□□ -2.31
NPHP3Q7Z494 MIR18B-201ENST00000454574 71 ntBASIC0.64□□□□□ -2.31
NPHP3Q7Z494 RNU7-56P-201ENST00000458744 62 ntBASIC0.64□□□□□ -2.31
NPHP3Q7Z494 AC023932.2-201ENST00000603176 175 ntBASIC0.64□□□□□ -2.31
NPHP3Q7Z494 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.64□□□□□ -2.31
NPHP3Q7Z494 AC021613.1-201ENST00000623880 111 ntBASIC0.64□□□□□ -2.31
NPHP3Q7Z494 Y_RNA.280-201ENST00000364765 112 ntBASIC0.63□□□□□ -2.31
NPHP3Q7Z494 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
NPHP3Q7Z494 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.63□□□□□ -2.31
NPHP3Q7Z494 RNA5SP261-201ENST00000410536 106 ntBASIC0.63□□□□□ -2.31
NPHP3Q7Z494 RNA5SP222-201ENST00000411039 105 ntBASIC0.63□□□□□ -2.31
NPHP3Q7Z494 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.63□□□□□ -2.31
NPHP3Q7Z494 Y_RNA.644-201ENST00000459006 113 ntBASIC0.63□□□□□ -2.31
NPHP3Q7Z494 RNU7-185P-201ENST00000459215 60 ntBASIC0.63□□□□□ -2.31
NPHP3Q7Z494 Y_RNA.674-201ENST00000516362 113 ntBASIC0.63□□□□□ -2.31
NPHP3Q7Z494 SNORA62.5-201ENST00000516634 120 ntBASIC0.63□□□□□ -2.31
NPHP3Q7Z494 MIR3152-201ENST00000579801 74 ntBASIC0.63□□□□□ -2.31
NPHP3Q7Z494 MIR4514-201ENST00000581410 57 ntBASIC0.63□□□□□ -2.31
NPHP3Q7Z494 AC141273.2-201ENST00000618989 130 ntBASIC0.63□□□□□ -2.31
NPHP3Q7Z494 RNU6-312P-201ENST00000364629 107 ntBASIC0.62□□□□□ -2.31
NPHP3Q7Z494 RNY1P8-201ENST00000383970 114 ntBASIC0.62□□□□□ -2.31
NPHP3Q7Z494 Y_RNA.430-201ENST00000384081 110 ntBASIC0.62□□□□□ -2.31
NPHP3Q7Z494 SNORA22.1-201ENST00000362701 134 ntBASIC0.61□□□□□ -2.31
NPHP3Q7Z494 Y_RNA.52-201ENST00000362760 96 ntBASIC0.61□□□□□ -2.31
NPHP3Q7Z494 Y_RNA.515-201ENST00000384535 112 ntBASIC0.61□□□□□ -2.31
NPHP3Q7Z494 SNORA20-201ENST00000384662 132 ntBASIC0.61□□□□□ -2.31
NPHP3Q7Z494 RNA5SP63-201ENST00000391225 112 ntBASIC0.61□□□□□ -2.31
NPHP3Q7Z494 RNU6-1258P-201ENST00000516911 111 ntBASIC0.61□□□□□ -2.31
NPHP3Q7Z494 AC008608.1-201ENST00000603910 127 ntBASIC0.61□□□□□ -2.31
NPHP3Q7Z494 MIR6841-201ENST00000637129 72 ntBASIC0.61□□□□□ -2.31
NPHP3Q7Z494 Y_RNA.476-201ENST00000384347 108 ntBASIC0.6□□□□□ -2.31
NPHP3Q7Z494 MIR573-201ENST00000384964 99 ntBASIC0.6□□□□□ -2.31
NPHP3Q7Z494 MIR125B2-201ENST00000385128 89 ntBASIC0.6□□□□□ -2.31
NPHP3Q7Z494 MT-TG-201ENST00000387429 68 ntBASIC0.6□□□□□ -2.31
NPHP3Q7Z494 MIR938-201ENST00000401216 83 ntBASIC0.6□□□□□ -2.31
NPHP3Q7Z494 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.6□□□□□ -2.31
NPHP3Q7Z494 AC107027.2-201ENST00000512197 115 ntBASIC0.6□□□□□ -2.31
NPHP3Q7Z494 SNORA36.2-201ENST00000384004 127 ntBASIC0.59□□□□□ -2.32
NPHP3Q7Z494 SNORA50A-201ENST00000384225 134 ntBASIC0.59□□□□□ -2.32
NPHP3Q7Z494 MIR1257-201ENST00000408490 117 ntBASIC0.59□□□□□ -2.32
NPHP3Q7Z494 RNU6-588P-201ENST00000410281 105 ntBASIC0.59□□□□□ -2.32
NPHP3Q7Z494 RNA5SP237-201ENST00000410414 113 ntBASIC0.59□□□□□ -2.32
NPHP3Q7Z494 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.32
NPHP3Q7Z494 Y_RNA.793-201ENST00000411222 111 ntBASIC0.59□□□□□ -2.32
NPHP3Q7Z494 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.32
NPHP3Q7Z494 RNU7-102P-201ENST00000458948 62 ntBASIC0.59□□□□□ -2.32
NPHP3Q7Z494 RNU6-138P-201ENST00000515952 107 ntBASIC0.59□□□□□ -2.32
NPHP3Q7Z494 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.32
NPHP3Q7Z494 RNU7-156P-201ENST00000517214 74 ntBASIC0.59□□□□□ -2.32
NPHP3Q7Z494 AP002392.1-201ENST00000537692 208 ntBASIC0.59□□□□□ -2.32
NPHP3Q7Z494 AL662814.1-201ENST00000617364 121 ntBASIC0.59□□□□□ -2.32
NPHP3Q7Z494 Y_RNA.337-201ENST00000365312 102 ntBASIC0.58□□□□□ -2.32
NPHP3Q7Z494 RNU6-364P-201ENST00000384387 107 ntBASIC0.58□□□□□ -2.32
NPHP3Q7Z494 Y_RNA.552-201ENST00000384665 112 ntBASIC0.58□□□□□ -2.32
NPHP3Q7Z494 MT-TF-201ENST00000387314 71 ntBASIC0.58□□□□□ -2.32
NPHP3Q7Z494 RNU5E-9P-201ENST00000411164 104 ntBASIC0.58□□□□□ -2.32
NPHP3Q7Z494 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.58□□□□□ -2.32
NPHP3Q7Z494 AC072026.1-201ENST00000605023 201 ntBASIC0.58□□□□□ -2.32
NPHP3Q7Z494 MIR3658-201ENST00000636291 56 ntBASIC0.58□□□□□ -2.32
NPHP3Q7Z494 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
NPHP3Q7Z494 RNU6-349P-201ENST00000362402 107 ntBASIC0.57□□□□□ -2.32
NPHP3Q7Z494 RNY1P11-201ENST00000363759 113 ntBASIC0.57□□□□□ -2.32
NPHP3Q7Z494 Y_RNA.171-201ENST00000363760 102 ntBASIC0.57□□□□□ -2.32
NPHP3Q7Z494 RNU6-200P-201ENST00000364743 107 ntBASIC0.57□□□□□ -2.32
NPHP3Q7Z494 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
NPHP3Q7Z494 RNY1P6-201ENST00000384193 109 ntBASIC0.57□□□□□ -2.32
NPHP3Q7Z494 SNORD93-201ENST00000408813 74 ntBASIC0.57□□□□□ -2.32
NPHP3Q7Z494 RNA5SP236-201ENST00000516169 116 ntBASIC0.57□□□□□ -2.32
NPHP3Q7Z494 RNU6-861P-201ENST00000516745 106 ntBASIC0.57□□□□□ -2.32
NPHP3Q7Z494 Y_RNA.757-201ENST00000578934 114 ntBASIC0.57□□□□□ -2.32
NPHP3Q7Z494 MIR3612-201ENST00000579753 87 ntBASIC0.57□□□□□ -2.32
NPHP3Q7Z494 MIR6844-201ENST00000637122 62 ntBASIC0.57□□□□□ -2.32
NPHP3Q7Z494 RNU6-818P-201ENST00000364837 108 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 Y_RNA.357-201ENST00000365487 109 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 SNORA18-201ENST00000384416 132 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 RNU6-35P-201ENST00000384530 107 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 RNU6-447P-201ENST00000410293 104 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 RNU6-1118P-201ENST00000410382 104 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 RNU6-1076P-201ENST00000410397 104 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 RNU6-355P-201ENST00000410427 104 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 RNU6-791P-201ENST00000410467 104 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 RNU6-705P-201ENST00000410601 104 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 RNU6-1100P-201ENST00000410691 104 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 RNU6-860P-201ENST00000410860 104 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 RNU6-1217P-201ENST00000411276 104 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 RNU6-785P-201ENST00000411324 104 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 AC141846.1-201ENST00000568348 142 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 SNORD92-201ENST00000585078 85 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.56□□□□□ -2.32
NPHP3Q7Z494 U6.90-201ENST00000614007 104 ntBASIC0.56□□□□□ -2.32
NPHP3Q7Z494 U6.70-201ENST00000620287 104 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 368.3 ms