Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MIR5194-201ENST00000582634 120 ntBASIC2.94□□□□□ -1.94
RC3H1Q5TC82 SNORD38B-202ENST00000625943 69 ntBASIC2.94□□□□□ -1.94
RC3H1Q5TC82 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RC3H1Q5TC82 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.94□□□□□ -1.94
RC3H1Q5TC82 MAPK10-266ENST00000641066 6555 ntBASIC2.93□□□□□ -1.94
RC3H1Q5TC82 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RC3H1Q5TC82 SNORA64-201ENST00000384674 134 ntBASIC2.93□□□□□ -1.94
RC3H1Q5TC82 RNA5SP237-201ENST00000410414 113 ntBASIC2.93□□□□□ -1.94
RC3H1Q5TC82 RNA5SP437-201ENST00000517249 129 ntBASIC2.93□□□□□ -1.94
RC3H1Q5TC82 MIR4764-201ENST00000580680 88 ntBASIC2.93□□□□□ -1.94
RC3H1Q5TC82 AC090897.1-201ENST00000580909 226 ntBASIC2.93□□□□□ -1.94
RC3H1Q5TC82 MIR219B-201ENST00000637023 88 ntBASIC2.93□□□□□ -1.94
RC3H1Q5TC82 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RC3H1Q5TC82 MIR524-201ENST00000385242 87 ntBASIC2.92□□□□□ -1.94
RC3H1Q5TC82 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.92□□□□□ -1.94
RC3H1Q5TC82 AC011753.1-201ENST00000451001 220 ntBASIC2.92□□□□□ -1.94
RC3H1Q5TC82 AC099513.1-201ENST00000490423 301 ntBASIC2.92□□□□□ -1.94
RC3H1Q5TC82 RNU6-70P-201ENST00000516438 60 ntBASIC2.92□□□□□ -1.94
RC3H1Q5TC82 MIR548AO-201ENST00000579992 96 ntBASIC2.92□□□□□ -1.94
RC3H1Q5TC82 AL353997.5-201ENST00000618886 171 ntBASIC2.92□□□□□ -1.94
RC3H1Q5TC82 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
RC3H1Q5TC82 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.92□□□□□ -1.94
RC3H1Q5TC82 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RC3H1Q5TC82 Y_RNA.532-201ENST00000384590 113 ntBASIC2.91□□□□□ -1.94
RC3H1Q5TC82 AC027119.1-201ENST00000440877 241 ntBASIC2.91□□□□□ -1.94
RC3H1Q5TC82 RNU6-634P-201ENST00000459134 106 ntBASIC2.91□□□□□ -1.94
RC3H1Q5TC82 RNVU1-2-201ENST00000516326 135 ntBASIC2.91□□□□□ -1.94
RC3H1Q5TC82 RNU6-687P-201ENST00000516443 89 ntBASIC2.91□□□□□ -1.94
RC3H1Q5TC82 Y_RNA.681-201ENST00000516445 113 ntBASIC2.91□□□□□ -1.94
RC3H1Q5TC82 RNU6-807P-201ENST00000516805 107 ntBASIC2.91□□□□□ -1.94
RC3H1Q5TC82 RNU6-850P-201ENST00000516934 103 ntBASIC2.91□□□□□ -1.94
RC3H1Q5TC82 AC080100.1-201ENST00000624239 5356 ntBASIC2.91□□□□□ -1.94
RC3H1Q5TC82 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
RC3H1Q5TC82 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
RC3H1Q5TC82 RNU6-811P-201ENST00000384069 107 ntBASIC2.9□□□□□ -1.95
RC3H1Q5TC82 AC019129.1-201ENST00000403786 261 ntBASIC2.9□□□□□ -1.95
RC3H1Q5TC82 RPS27P21-201ENST00000486977 252 ntBASIC2.9□□□□□ -1.95
RC3H1Q5TC82 MIR4500-201ENST00000579472 76 ntBASIC2.9□□□□□ -1.95
RC3H1Q5TC82 MIR4484-201ENST00000582855 83 ntBASIC2.9□□□□□ -1.95
RC3H1Q5TC82 AL662814.1-201ENST00000617364 121 ntBASIC2.9□□□□□ -1.95
RC3H1Q5TC82 MIR1297-201ENST00000637311 77 ntBASIC2.9□□□□□ -1.95
RC3H1Q5TC82 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RC3H1Q5TC82 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.89□□□□□ -1.95
RC3H1Q5TC82 MIR424-201ENST00000362227 98 ntBASIC2.89□□□□□ -1.95
RC3H1Q5TC82 Y_RNA.386-201ENST00000383913 105 ntBASIC2.89□□□□□ -1.95
RC3H1Q5TC82 RNU6-949P-201ENST00000384040 107 ntBASIC2.89□□□□□ -1.95
RC3H1Q5TC82 RNU1-138P-201ENST00000384093 164 ntBASIC2.89□□□□□ -1.95
RC3H1Q5TC82 MIR520C-201ENST00000385005 87 ntBASIC2.89□□□□□ -1.95
RC3H1Q5TC82 RNA5SP292-201ENST00000390974 118 ntBASIC2.89□□□□□ -1.95
RC3H1Q5TC82 snoU13.27-201ENST00000459278 104 ntBASIC2.89□□□□□ -1.95
RC3H1Q5TC82 RPL23AP42-201ENST00000471152 471 ntBASIC2.89□□□□□ -1.95
RC3H1Q5TC82 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.89□□□□□ -1.95
RC3H1Q5TC82 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.89□□□□□ -1.95
RC3H1Q5TC82 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RC3H1Q5TC82 RNA5SP393-201ENST00000363423 117 ntBASIC2.88□□□□□ -1.95
RC3H1Q5TC82 SNORA67.1-201ENST00000364749 141 ntBASIC2.88□□□□□ -1.95
RC3H1Q5TC82 MIR221-201ENST00000385135 110 ntBASIC2.88□□□□□ -1.95
RC3H1Q5TC82 SNORA18.5-201ENST00000516616 101 ntBASIC2.88□□□□□ -1.95
RC3H1Q5TC82 SUB1P4-201ENST00000566062 339 ntBASIC2.88□□□□□ -1.95
RC3H1Q5TC82 MIR4536-1-201ENST00000583537 88 ntBASIC2.88□□□□□ -1.95
RC3H1Q5TC82 AL049779.4-201ENST00000604500 156 ntBASIC2.88□□□□□ -1.95
RC3H1Q5TC82 WWP1P1-201ENST00000466609 2769 ntBASIC2.87□□□□□ -1.95
RC3H1Q5TC82 ZNF355P-201ENST00000427301 3216 ntBASIC2.87□□□□□ -1.95
RC3H1Q5TC82 RNU6-571P-201ENST00000384128 107 ntBASIC2.87□□□□□ -1.95
RC3H1Q5TC82 SNORA67.3-201ENST00000384366 140 ntBASIC2.87□□□□□ -1.95
RC3H1Q5TC82 RNU6-649P-201ENST00000384463 107 ntBASIC2.87□□□□□ -1.95
RC3H1Q5TC82 SNORA72.6-201ENST00000384520 129 ntBASIC2.87□□□□□ -1.95
RC3H1Q5TC82 MIR635-201ENST00000384830 98 ntBASIC2.87□□□□□ -1.95
RC3H1Q5TC82 MIR1283-2-201ENST00000408621 87 ntBASIC2.87□□□□□ -1.95
RC3H1Q5TC82 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RC3H1Q5TC82 RNA5SP481-201ENST00000516814 122 ntBASIC2.87□□□□□ -1.95
RC3H1Q5TC82 AC138749.4-201ENST00000563970 127 ntBASIC2.87□□□□□ -1.95
RC3H1Q5TC82 MIR3126-201ENST00000577443 74 ntBASIC2.87□□□□□ -1.95
RC3H1Q5TC82 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
RC3H1Q5TC82 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
RC3H1Q5TC82 RNU5F-1-201ENST00000362507 117 ntBASIC2.86□□□□□ -1.95
RC3H1Q5TC82 Y_RNA.264-201ENST00000364665 102 ntBASIC2.86□□□□□ -1.95
RC3H1Q5TC82 RNU6-296P-201ENST00000384608 107 ntBASIC2.86□□□□□ -1.95
RC3H1Q5TC82 MIR520H-201ENST00000385126 88 ntBASIC2.86□□□□□ -1.95
RC3H1Q5TC82 U8.13-201ENST00000390842 128 ntBASIC2.86□□□□□ -1.95
RC3H1Q5TC82 SNORD77.2-201ENST00000391045 68 ntBASIC2.86□□□□□ -1.95
RC3H1Q5TC82 RNU2-59P-201ENST00000410482 191 ntBASIC2.86□□□□□ -1.95
RC3H1Q5TC82 AC005908.1-201ENST00000468701 347 ntBASIC2.86□□□□□ -1.95
RC3H1Q5TC82 MIR3935-201ENST00000583472 104 ntBASIC2.86□□□□□ -1.95
RC3H1Q5TC82 MIR4658-201ENST00000584344 65 ntBASIC2.86□□□□□ -1.95
RC3H1Q5TC82 MIR4251-201ENST00000635819 61 ntBASIC2.86□□□□□ -1.95
RC3H1Q5TC82 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
RC3H1Q5TC82 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RC3H1Q5TC82 MIR21-201ENST00000362134 72 ntBASIC2.85□□□□□ -1.95
RC3H1Q5TC82 RNU6-112P-201ENST00000363599 104 ntBASIC2.85□□□□□ -1.95
RC3H1Q5TC82 SNORA48.1-201ENST00000390879 135 ntBASIC2.85□□□□□ -1.95
RC3H1Q5TC82 HSPE1P24-201ENST00000450782 238 ntBASIC2.85□□□□□ -1.95
RC3H1Q5TC82 AC023790.1-201ENST00000482174 347 ntBASIC2.85□□□□□ -1.95
RC3H1Q5TC82 RNA5SP200-201ENST00000516360 103 ntBASIC2.85□□□□□ -1.95
RC3H1Q5TC82 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.85□□□□□ -1.95
RC3H1Q5TC82 MIR6766-201ENST00000622641 72 ntBASIC2.85□□□□□ -1.95
RC3H1Q5TC82 Y_RNA.205-201ENST00000364128 113 ntBASIC2.84□□□□□ -1.95
RC3H1Q5TC82 SNORA26.9-201ENST00000391322 122 ntBASIC2.84□□□□□ -1.95
RC3H1Q5TC82 RNA5SP458-201ENST00000516188 119 ntBASIC2.84□□□□□ -1.95
RC3H1Q5TC82 Y_RNA.676-201ENST00000516393 96 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms