Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 RNU6-919P-201ENST00000516731 104 ntBASIC1.56□□□□□ -2.16
CCDC178Q5BJE1 MIR6516-201ENST00000630554 81 ntBASIC1.56□□□□□ -2.16
CCDC178Q5BJE1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC178Q5BJE1 Y_RNA.299-201ENST00000364973 94 ntBASIC1.55□□□□□ -2.16
CCDC178Q5BJE1 Y_RNA.362-201ENST00000365518 110 ntBASIC1.55□□□□□ -2.16
CCDC178Q5BJE1 SNORA22-201ENST00000383907 134 ntBASIC1.55□□□□□ -2.16
CCDC178Q5BJE1 RNU6-1086P-201ENST00000410930 100 ntBASIC1.55□□□□□ -2.16
CCDC178Q5BJE1 AC244023.1-201ENST00000426884 112 ntBASIC1.55□□□□□ -2.16
CCDC178Q5BJE1 AC242498.1-201ENST00000604134 111 ntBASIC1.55□□□□□ -2.16
CCDC178Q5BJE1 MIR7974-201ENST00000615835 79 ntBASIC1.55□□□□□ -2.16
CCDC178Q5BJE1 SNORA63.4-201ENST00000362763 126 ntBASIC1.54□□□□□ -2.16
CCDC178Q5BJE1 SNORD115-2-201ENST00000362842 82 ntBASIC1.54□□□□□ -2.16
CCDC178Q5BJE1 SNORD115-20-201ENST00000365099 82 ntBASIC1.54□□□□□ -2.16
CCDC178Q5BJE1 Y_RNA.344-201ENST00000365381 112 ntBASIC1.54□□□□□ -2.16
CCDC178Q5BJE1 MIR588-201ENST00000384900 83 ntBASIC1.54□□□□□ -2.16
CCDC178Q5BJE1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.54□□□□□ -2.16
CCDC178Q5BJE1 Y_RNA.709-201ENST00000516952 92 ntBASIC1.54□□□□□ -2.16
CCDC178Q5BJE1 MIR3660-201ENST00000584845 100 ntBASIC1.54□□□□□ -2.16
CCDC178Q5BJE1 AL353770.2-201ENST00000620024 78 ntBASIC1.54□□□□□ -2.16
CCDC178Q5BJE1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
CCDC178Q5BJE1 AL589743.1-201ENST00000551932 2712 ntBASIC1.53□□□□□ -2.16
CCDC178Q5BJE1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC178Q5BJE1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC178Q5BJE1 RNU6-616P-201ENST00000384353 107 ntBASIC1.52□□□□□ -2.17
CCDC178Q5BJE1 SNORA2B-201ENST00000384583 137 ntBASIC1.52□□□□□ -2.17
CCDC178Q5BJE1 SNORA40.6-201ENST00000391153 128 ntBASIC1.52□□□□□ -2.17
CCDC178Q5BJE1 RNU7-62P-201ENST00000458856 62 ntBASIC1.52□□□□□ -2.17
CCDC178Q5BJE1 RNU6-589P-201ENST00000516485 107 ntBASIC1.52□□□□□ -2.17
CCDC178Q5BJE1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.52□□□□□ -2.17
CCDC178Q5BJE1 AC087741.2-201ENST00000619415 172 ntBASIC1.52□□□□□ -2.17
CCDC178Q5BJE1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC178Q5BJE1 RNU6-910P-201ENST00000390844 107 ntBASIC1.51□□□□□ -2.17
CCDC178Q5BJE1 RNY4P18-201ENST00000391107 89 ntBASIC1.51□□□□□ -2.17
CCDC178Q5BJE1 MIR1270-201ENST00000459320 83 ntBASIC1.51□□□□□ -2.17
CCDC178Q5BJE1 RNU6-412P-201ENST00000516434 106 ntBASIC1.51□□□□□ -2.17
CCDC178Q5BJE1 AP003716.2-201ENST00000528260 108 ntBASIC1.51□□□□□ -2.17
CCDC178Q5BJE1 MIR4264-201ENST00000583520 66 ntBASIC1.51□□□□□ -2.17
CCDC178Q5BJE1 MIR4781-201ENST00000585250 76 ntBASIC1.51□□□□□ -2.17
CCDC178Q5BJE1 Y_RNA.773-201ENST00000607168 90 ntBASIC1.51□□□□□ -2.17
CCDC178Q5BJE1 AL157834.3-201ENST00000615543 103 ntBASIC1.51□□□□□ -2.17
CCDC178Q5BJE1 MIR1255B1-201ENST00000636325 63 ntBASIC1.51□□□□□ -2.17
CCDC178Q5BJE1 SNORA75.2-201ENST00000391138 150 ntBASIC1.5□□□□□ -2.17
CCDC178Q5BJE1 SNORA75.3-201ENST00000391231 150 ntBASIC1.5□□□□□ -2.17
CCDC178Q5BJE1 RPL39P25-201ENST00000449384 154 ntBASIC1.5□□□□□ -2.17
CCDC178Q5BJE1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.5□□□□□ -2.17
CCDC178Q5BJE1 AC004223.1-201ENST00000479840 271 ntBASIC1.5□□□□□ -2.17
CCDC178Q5BJE1 RNU7-79P-201ENST00000516082 62 ntBASIC1.5□□□□□ -2.17
CCDC178Q5BJE1 AC023827.1-201ENST00000569247 97 ntBASIC1.5□□□□□ -2.17
CCDC178Q5BJE1 MIR6740-201ENST00000618268 113 ntBASIC1.5□□□□□ -2.17
CCDC178Q5BJE1 Y_RNA.81-201ENST00000362997 102 ntBASIC1.49□□□□□ -2.17
CCDC178Q5BJE1 MIR222-201ENST00000384992 110 ntBASIC1.49□□□□□ -2.17
CCDC178Q5BJE1 RNU6-816P-201ENST00000390914 107 ntBASIC1.49□□□□□ -2.17
CCDC178Q5BJE1 RNU6-1268P-201ENST00000391214 107 ntBASIC1.49□□□□□ -2.17
CCDC178Q5BJE1 RNU6-1239P-201ENST00000391310 107 ntBASIC1.49□□□□□ -2.17
CCDC178Q5BJE1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.49□□□□□ -2.17
CCDC178Q5BJE1 snoU13.2-201ENST00000459201 104 ntBASIC1.49□□□□□ -2.17
CCDC178Q5BJE1 RNU11-2P-201ENST00000516898 142 ntBASIC1.49□□□□□ -2.17
CCDC178Q5BJE1 AL359821.1-201ENST00000605519 182 ntBASIC1.49□□□□□ -2.17
CCDC178Q5BJE1 Y_RNA.155-201ENST00000363632 101 ntBASIC1.48□□□□□ -2.17
CCDC178Q5BJE1 RNU6-1107P-201ENST00000364817 104 ntBASIC1.48□□□□□ -2.17
CCDC178Q5BJE1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.48□□□□□ -2.17
CCDC178Q5BJE1 SNORA7.5-201ENST00000410672 110 ntBASIC1.48□□□□□ -2.17
CCDC178Q5BJE1 AC063976.4-201ENST00000421971 163 ntBASIC1.48□□□□□ -2.17
CCDC178Q5BJE1 SNORD67.1-201ENST00000516618 108 ntBASIC1.48□□□□□ -2.17
CCDC178Q5BJE1 AC141846.1-201ENST00000568348 142 ntBASIC1.48□□□□□ -2.17
CCDC178Q5BJE1 FAM71BP1-201ENST00000604431 523 ntBASIC1.48□□□□□ -2.17
CCDC178Q5BJE1 uc_338.28-201ENST00000612082 187 ntBASIC1.48□□□□□ -2.17
CCDC178Q5BJE1 AL662814.1-201ENST00000617364 121 ntBASIC1.48□□□□□ -2.17
CCDC178Q5BJE1 AC105081.1-201ENST00000617727 106 ntBASIC1.48□□□□□ -2.17
CCDC178Q5BJE1 SEPT14P17-201ENST00000617978 177 ntBASIC1.48□□□□□ -2.17
CCDC178Q5BJE1 Y_RNA.85-201ENST00000363014 111 ntBASIC1.47□□□□□ -2.17
CCDC178Q5BJE1 RNU6-1165P-201ENST00000410119 107 ntBASIC1.47□□□□□ -2.17
CCDC178Q5BJE1 RNU6-613P-201ENST00000410412 108 ntBASIC1.47□□□□□ -2.17
CCDC178Q5BJE1 RNU6-321P-201ENST00000410912 106 ntBASIC1.47□□□□□ -2.17
CCDC178Q5BJE1 RNA5SP247-201ENST00000411181 105 ntBASIC1.47□□□□□ -2.17
CCDC178Q5BJE1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.47□□□□□ -2.17
CCDC178Q5BJE1 RNU7-35P-201ENST00000517174 62 ntBASIC1.47□□□□□ -2.17
CCDC178Q5BJE1 AC068338.1-201ENST00000565567 176 ntBASIC1.47□□□□□ -2.17
CCDC178Q5BJE1 uc_338.6-201ENST00000613544 171 ntBASIC1.47□□□□□ -2.17
CCDC178Q5BJE1 Y_RNA.49-201ENST00000362714 112 ntBASIC1.46□□□□□ -2.18
CCDC178Q5BJE1 Y_RNA.281-201ENST00000364774 94 ntBASIC1.46□□□□□ -2.18
CCDC178Q5BJE1 Y_RNA.507-201ENST00000384500 99 ntBASIC1.46□□□□□ -2.18
CCDC178Q5BJE1 MT-TN-201ENST00000387400 73 ntBASIC1.46□□□□□ -2.18
CCDC178Q5BJE1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.46□□□□□ -2.18
CCDC178Q5BJE1 MRPL35P3-201ENST00000421557 364 ntBASIC1.46□□□□□ -2.18
CCDC178Q5BJE1 RPL39P34-201ENST00000477141 156 ntBASIC1.46□□□□□ -2.18
CCDC178Q5BJE1 AC068339.1-201ENST00000526965 141 ntBASIC1.46□□□□□ -2.18
CCDC178Q5BJE1 MIR4679-2-201ENST00000578358 77 ntBASIC1.46□□□□□ -2.18
CCDC178Q5BJE1 AL162726.3-218ENST00000636401 95 ntBASIC1.46□□□□□ -2.18
CCDC178Q5BJE1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC178Q5BJE1 SNORD115-19-201ENST00000363098 82 ntBASIC1.45□□□□□ -2.18
CCDC178Q5BJE1 Y_RNA.116-201ENST00000363292 103 ntBASIC1.45□□□□□ -2.18
CCDC178Q5BJE1 SNORD115-18-201ENST00000363293 82 ntBASIC1.45□□□□□ -2.18
CCDC178Q5BJE1 SNORD115-17-201ENST00000364612 82 ntBASIC1.45□□□□□ -2.18
CCDC178Q5BJE1 U8.6-201ENST00000364939 135 ntBASIC1.45□□□□□ -2.18
CCDC178Q5BJE1 RNY1P13-201ENST00000365030 105 ntBASIC1.45□□□□□ -2.18
CCDC178Q5BJE1 Y_RNA.309-201ENST00000365046 111 ntBASIC1.45□□□□□ -2.18
CCDC178Q5BJE1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.45□□□□□ -2.18
CCDC178Q5BJE1 SNORD26-201ENST00000384147 75 ntBASIC1.45□□□□□ -2.18
CCDC178Q5BJE1 AL591704.2-201ENST00000421658 181 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms