Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 AL035461.1-201ENST00000421490 332 ntBASIC1.74□□□□□ -2.13
ZNF394Q53GI3 MIR18B-201ENST00000454574 71 ntBASIC1.74□□□□□ -2.13
ZNF394Q53GI3 RNU1-98P-201ENST00000458992 160 ntBASIC1.74□□□□□ -2.13
ZNF394Q53GI3 AL035470.1-201ENST00000622571 220 ntBASIC1.74□□□□□ -2.13
ZNF394Q53GI3 SNORD114-10-201ENST00000363409 72 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 RNU6-949P-201ENST00000384040 107 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 RNU6-447P-201ENST00000410293 104 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 RNU6-355P-201ENST00000410427 104 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 RNU6-791P-201ENST00000410467 104 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 RNU6-705P-201ENST00000410601 104 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 RNU6-860P-201ENST00000410860 104 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 RNU6-1217P-201ENST00000411276 104 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 RNU6-785P-201ENST00000411324 104 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.73□□□□□ -2.13
ZNF394Q53GI3 SNORA4-201ENST00000584302 138 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 U6.90-201ENST00000614007 104 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 AC012676.2-201ENST00000619258 186 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 U6.70-201ENST00000620287 104 ntBASIC1.73□□□□□ -2.13
ZNF394Q53GI3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ZNF394Q53GI3 RNU1-17P-201ENST00000363022 152 ntBASIC1.72□□□□□ -2.13
ZNF394Q53GI3 SNORA63.5-201ENST00000363548 123 ntBASIC1.72□□□□□ -2.13
ZNF394Q53GI3 SNORA2B-201ENST00000384583 137 ntBASIC1.72□□□□□ -2.13
ZNF394Q53GI3 Y_RNA.549-201ENST00000384657 102 ntBASIC1.72□□□□□ -2.13
ZNF394Q53GI3 MIR1270-201ENST00000459320 83 ntBASIC1.72□□□□□ -2.13
ZNF394Q53GI3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.72□□□□□ -2.13
ZNF394Q53GI3 RNU6-1107P-201ENST00000364817 104 ntBASIC1.71□□□□□ -2.14
ZNF394Q53GI3 RNY1P13-201ENST00000365030 105 ntBASIC1.71□□□□□ -2.14
ZNF394Q53GI3 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
ZNF394Q53GI3 Y_RNA.323-201ENST00000365157 109 ntBASIC1.71□□□□□ -2.14
ZNF394Q53GI3 RNU6-616P-201ENST00000384353 107 ntBASIC1.71□□□□□ -2.14
ZNF394Q53GI3 RNY4P18-201ENST00000391107 89 ntBASIC1.71□□□□□ -2.14
ZNF394Q53GI3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.71□□□□□ -2.14
ZNF394Q53GI3 RPL39P25-201ENST00000449384 154 ntBASIC1.71□□□□□ -2.14
ZNF394Q53GI3 AC106800.4-201ENST00000614905 153 ntBASIC1.71□□□□□ -2.14
ZNF394Q53GI3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ZNF394Q53GI3 MIR30D-201ENST00000362283 70 ntBASIC1.7□□□□□ -2.14
ZNF394Q53GI3 RNU6-363P-201ENST00000362895 105 ntBASIC1.7□□□□□ -2.14
ZNF394Q53GI3 SNORD26-201ENST00000384147 75 ntBASIC1.7□□□□□ -2.14
ZNF394Q53GI3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.7□□□□□ -2.14
ZNF394Q53GI3 AC036111.3-201ENST00000526389 112 ntBASIC1.7□□□□□ -2.14
ZNF394Q53GI3 AC068339.1-201ENST00000526965 141 ntBASIC1.7□□□□□ -2.14
ZNF394Q53GI3 RNU6-94P-201ENST00000607728 107 ntBASIC1.7□□□□□ -2.14
ZNF394Q53GI3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ZNF394Q53GI3 RNU6-755P-201ENST00000364400 103 ntBASIC1.69□□□□□ -2.14
ZNF394Q53GI3 RNU4-67P-201ENST00000364569 141 ntBASIC1.69□□□□□ -2.14
ZNF394Q53GI3 SNORA25-201ENST00000384384 134 ntBASIC1.69□□□□□ -2.14
ZNF394Q53GI3 RNU6-816P-201ENST00000390914 107 ntBASIC1.69□□□□□ -2.14
ZNF394Q53GI3 RNU6-1268P-201ENST00000391214 107 ntBASIC1.69□□□□□ -2.14
ZNF394Q53GI3 RNU6-1239P-201ENST00000391310 107 ntBASIC1.69□□□□□ -2.14
ZNF394Q53GI3 RNA5SP95-201ENST00000410319 137 ntBASIC1.69□□□□□ -2.14
ZNF394Q53GI3 RPS29P23-201ENST00000458635 123 ntBASIC1.69□□□□□ -2.14
ZNF394Q53GI3 RNU7-137P-201ENST00000516788 62 ntBASIC1.69□□□□□ -2.14
ZNF394Q53GI3 Y_RNA.773-201ENST00000607168 90 ntBASIC1.69□□□□□ -2.14
ZNF394Q53GI3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.68□□□□□ -2.14
ZNF394Q53GI3 SNORD115-35-201ENST00000365122 82 ntBASIC1.68□□□□□ -2.14
ZNF394Q53GI3 RNU6-409P-201ENST00000384114 104 ntBASIC1.68□□□□□ -2.14
ZNF394Q53GI3 MIR222-201ENST00000384992 110 ntBASIC1.68□□□□□ -2.14
ZNF394Q53GI3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.68□□□□□ -2.14
ZNF394Q53GI3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
ZNF394Q53GI3 RNU7-2P-201ENST00000516096 62 ntBASIC1.68□□□□□ -2.14
ZNF394Q53GI3 MIR5009-201ENST00000578736 100 ntBASIC1.68□□□□□ -2.14
ZNF394Q53GI3 MIR4255-201ENST00000579351 72 ntBASIC1.68□□□□□ -2.14
ZNF394Q53GI3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.68□□□□□ -2.14
ZNF394Q53GI3 Y_RNA.81-201ENST00000362997 102 ntBASIC1.67□□□□□ -2.14
ZNF394Q53GI3 MIR1323-201ENST00000408090 73 ntBASIC1.67□□□□□ -2.14
ZNF394Q53GI3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.67□□□□□ -2.14
ZNF394Q53GI3 SNORD67.1-201ENST00000516618 108 ntBASIC1.67□□□□□ -2.14
ZNF394Q53GI3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
ZNF394Q53GI3 U8.6-201ENST00000364939 135 ntBASIC1.66□□□□□ -2.14
ZNF394Q53GI3 MIR206-201ENST00000384872 86 ntBASIC1.66□□□□□ -2.14
ZNF394Q53GI3 RNU6-1018P-201ENST00000516577 106 ntBASIC1.66□□□□□ -2.14
ZNF394Q53GI3 BX248123.2-201ENST00000606318 124 ntBASIC1.66□□□□□ -2.14
ZNF394Q53GI3 MIR1255B1-201ENST00000636325 63 ntBASIC1.66□□□□□ -2.14
ZNF394Q53GI3 Y_RNA.155-201ENST00000363632 101 ntBASIC1.65□□□□□ -2.15
ZNF394Q53GI3 SNORA22-201ENST00000383907 134 ntBASIC1.65□□□□□ -2.15
ZNF394Q53GI3 RNU6-1014P-201ENST00000383940 103 ntBASIC1.65□□□□□ -2.15
ZNF394Q53GI3 MIR1302-5-201ENST00000408164 150 ntBASIC1.65□□□□□ -2.15
ZNF394Q53GI3 RNU6-733P-201ENST00000410759 104 ntBASIC1.65□□□□□ -2.15
ZNF394Q53GI3 AC133485.1-201ENST00000567176 124 ntBASIC1.65□□□□□ -2.15
ZNF394Q53GI3 AC008163.1-202ENST00000636004 2889 ntBASIC1.65□□□□□ -2.15
ZNF394Q53GI3 RNA5SP327-201ENST00000362494 101 ntBASIC1.64□□□□□ -2.15
ZNF394Q53GI3 SNORA17.3-201ENST00000391159 129 ntBASIC1.64□□□□□ -2.15
ZNF394Q53GI3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.64□□□□□ -2.15
ZNF394Q53GI3 RNU6-521P-201ENST00000516663 105 ntBASIC1.64□□□□□ -2.15
ZNF394Q53GI3 SNORD53B-201ENST00000577887 78 ntBASIC1.64□□□□□ -2.15
ZNF394Q53GI3 MIR4303-201ENST00000581299 66 ntBASIC1.64□□□□□ -2.15
ZNF394Q53GI3 AL645939.4-201ENST00000604495 135 ntBASIC1.64□□□□□ -2.15
ZNF394Q53GI3 AC027335.2-201ENST00000624030 375 ntBASIC1.64□□□□□ -2.15
ZNF394Q53GI3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ZNF394Q53GI3 AL391516.1-201ENST00000554380 2449 ntBASIC1.64□□□□□ -2.15
ZNF394Q53GI3 RNU1-42P-201ENST00000364033 160 ntBASIC1.63□□□□□ -2.15
ZNF394Q53GI3 RNU6-44P-201ENST00000384045 107 ntBASIC1.63□□□□□ -2.15
ZNF394Q53GI3 MIR1304-201ENST00000408243 91 ntBASIC1.63□□□□□ -2.15
ZNF394Q53GI3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.63□□□□□ -2.15
ZNF394Q53GI3 Y_RNA.98-201ENST00000363109 102 ntBASIC1.62□□□□□ -2.15
ZNF394Q53GI3 Y_RNA.163-201ENST00000363702 113 ntBASIC1.62□□□□□ -2.15
ZNF394Q53GI3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms