Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.86□□□□□ -2.11
MRE11P49959 MIR502-201ENST00000606349 86 ntBASIC1.86□□□□□ -2.11
MRE11P49959 MIR8055-201ENST00000610739 97 ntBASIC1.86□□□□□ -2.11
MRE11P49959 AL162726.3-218ENST00000636401 95 ntBASIC1.86□□□□□ -2.11
MRE11P49959 Y_RNA.299-201ENST00000364973 94 ntBASIC1.85□□□□□ -2.11
MRE11P49959 RNA5SP259-201ENST00000365541 109 ntBASIC1.85□□□□□ -2.11
MRE11P49959 SNORA51.5-201ENST00000384126 131 ntBASIC1.85□□□□□ -2.11
MRE11P49959 RNU4-69P-201ENST00000410677 143 ntBASIC1.85□□□□□ -2.11
MRE11P49959 RNU6-322P-201ENST00000516010 103 ntBASIC1.85□□□□□ -2.11
MRE11P49959 RNA5SP395-201ENST00000516567 118 ntBASIC1.85□□□□□ -2.11
MRE11P49959 AL513534.2-201ENST00000603836 250 ntBASIC1.85□□□□□ -2.11
MRE11P49959 AL157834.3-201ENST00000615543 103 ntBASIC1.85□□□□□ -2.11
MRE11P49959 SNORD115-19-201ENST00000363098 82 ntBASIC1.84□□□□□ -2.11
MRE11P49959 SNORD115-18-201ENST00000363293 82 ntBASIC1.84□□□□□ -2.11
MRE11P49959 SNORD115-17-201ENST00000364612 82 ntBASIC1.84□□□□□ -2.11
MRE11P49959 RNA5SP33-201ENST00000516687 98 ntBASIC1.84□□□□□ -2.11
MRE11P49959 RNU6-537P-201ENST00000517277 103 ntBASIC1.84□□□□□ -2.11
MRE11P49959 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
MRE11P49959 MIR96-201ENST00000362288 78 ntBASIC1.83□□□□□ -2.12
MRE11P49959 SNORA1.1-201ENST00000364671 133 ntBASIC1.83□□□□□ -2.12
MRE11P49959 RNU6-816P-201ENST00000390914 107 ntBASIC1.83□□□□□ -2.12
MRE11P49959 RNU6-1268P-201ENST00000391214 107 ntBASIC1.83□□□□□ -2.12
MRE11P49959 RNU6-1239P-201ENST00000391310 107 ntBASIC1.83□□□□□ -2.12
MRE11P49959 AL451046.2-201ENST00000403074 277 ntBASIC1.83□□□□□ -2.12
MRE11P49959 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.83□□□□□ -2.12
MRE11P49959 RPS3AP1-201ENST00000413190 320 ntBASIC1.83□□□□□ -2.12
MRE11P49959 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.83□□□□□ -2.12
MRE11P49959 SNORA77B-201ENST00000578179 125 ntBASIC1.83□□□□□ -2.12
MRE11P49959 RN7SL793P-201ENST00000583259 296 ntBASIC1.83□□□□□ -2.12
MRE11P49959 MIR548AE2-201ENST00000583456 67 ntBASIC1.83□□□□□ -2.12
MRE11P49959 MIR8074-201ENST00000615081 81 ntBASIC1.83□□□□□ -2.12
MRE11P49959 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.83□□□□□ -2.12
MRE11P49959 Y_RNA.43-201ENST00000362670 111 ntBASIC1.82□□□□□ -2.12
MRE11P49959 RNU6-1113P-201ENST00000384348 107 ntBASIC1.82□□□□□ -2.12
MRE11P49959 RNY1P4-201ENST00000384595 115 ntBASIC1.82□□□□□ -2.12
MRE11P49959 SNORD41-201ENST00000386967 70 ntBASIC1.82□□□□□ -2.12
MRE11P49959 MIR1912-201ENST00000410389 80 ntBASIC1.82□□□□□ -2.12
MRE11P49959 RPL39P25-201ENST00000449384 154 ntBASIC1.82□□□□□ -2.12
MRE11P49959 MIR1270-201ENST00000459320 83 ntBASIC1.82□□□□□ -2.12
MRE11P49959 RPS29P1-201ENST00000465274 159 ntBASIC1.82□□□□□ -2.12
MRE11P49959 RNU7-41P-201ENST00000515917 61 ntBASIC1.82□□□□□ -2.12
MRE11P49959 Y_RNA.677-201ENST00000516401 85 ntBASIC1.82□□□□□ -2.12
MRE11P49959 AC015688.6-201ENST00000577737 104 ntBASIC1.82□□□□□ -2.12
MRE11P49959 MIR151B-201ENST00000584249 96 ntBASIC1.82□□□□□ -2.12
MRE11P49959 Y_RNA.773-201ENST00000607168 90 ntBASIC1.82□□□□□ -2.12
MRE11P49959 MIR7974-201ENST00000615835 79 ntBASIC1.82□□□□□ -2.12
MRE11P49959 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.82□□□□□ -2.12
MRE11P49959 MIR1255B1-201ENST00000636325 63 ntBASIC1.82□□□□□ -2.12
MRE11P49959 Z97988.1-201ENST00000637697 135 ntBASIC1.82□□□□□ -2.12
MRE11P49959 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
MRE11P49959 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.81□□□□□ -2.12
MRE11P49959 Y_RNA.694-201ENST00000516677 117 ntBASIC1.81□□□□□ -2.12
MRE11P49959 MIR4255-201ENST00000579351 72 ntBASIC1.81□□□□□ -2.12
MRE11P49959 MIR548AO-201ENST00000579992 96 ntBASIC1.81□□□□□ -2.12
MRE11P49959 MIR4251-201ENST00000635819 61 ntBASIC1.81□□□□□ -2.12
MRE11P49959 AP000648.3-201ENST00000623539 4507 ntBASIC1.81□□□□□ -2.12
MRE11P49959 Y_RNA.78-201ENST00000362970 110 ntBASIC1.8□□□□□ -2.12
MRE11P49959 Y_RNA.348-201ENST00000365403 103 ntBASIC1.8□□□□□ -2.12
MRE11P49959 SNORA19.1-201ENST00000410656 129 ntBASIC1.8□□□□□ -2.12
MRE11P49959 SNORD111.1-201ENST00000516421 86 ntBASIC1.8□□□□□ -2.12
MRE11P49959 RNU6-922P-201ENST00000516753 99 ntBASIC1.8□□□□□ -2.12
MRE11P49959 MIR4422-201ENST00000581938 83 ntBASIC1.8□□□□□ -2.12
MRE11P49959 AC096720.1-201ENST00000604441 183 ntBASIC1.8□□□□□ -2.12
MRE11P49959 AP001318.4-201ENST00000616637 121 ntBASIC1.8□□□□□ -2.12
MRE11P49959 MIR8065-201ENST00000620577 100 ntBASIC1.8□□□□□ -2.12
MRE11P49959 RNU6-363P-201ENST00000362895 105 ntBASIC1.79□□□□□ -2.12
MRE11P49959 RNU6-1255P-201ENST00000363434 112 ntBASIC1.79□□□□□ -2.12
MRE11P49959 RNU6-53P-201ENST00000365367 106 ntBASIC1.79□□□□□ -2.12
MRE11P49959 Y_RNA.507-201ENST00000384500 99 ntBASIC1.79□□□□□ -2.12
MRE11P49959 MIR520E-201ENST00000384867 87 ntBASIC1.79□□□□□ -2.12
MRE11P49959 MIR590-201ENST00000385008 97 ntBASIC1.79□□□□□ -2.12
MRE11P49959 SNORD77B-201ENST00000391112 67 ntBASIC1.79□□□□□ -2.12
MRE11P49959 RNU6-602P-201ENST00000411155 105 ntBASIC1.79□□□□□ -2.12
MRE11P49959 AC023790.1-201ENST00000482174 347 ntBASIC1.79□□□□□ -2.12
MRE11P49959 MIR6788-201ENST00000618842 66 ntBASIC1.79□□□□□ -2.12
MRE11P49959 RNU1-42P-201ENST00000364033 160 ntBASIC1.78□□□□□ -2.12
MRE11P49959 SNORA32-201ENST00000384072 121 ntBASIC1.78□□□□□ -2.12
MRE11P49959 RNU6-616P-201ENST00000384353 107 ntBASIC1.78□□□□□ -2.12
MRE11P49959 RNU6-905P-201ENST00000384434 107 ntBASIC1.78□□□□□ -2.12
MRE11P49959 AC090844.1-201ENST00000422019 156 ntBASIC1.78□□□□□ -2.12
MRE11P49959 RNU6-904P-201ENST00000516206 101 ntBASIC1.78□□□□□ -2.12
MRE11P49959 AC141557.1-201ENST00000540982 400 ntBASIC1.78□□□□□ -2.12
MRE11P49959 SNORD53B-201ENST00000577887 78 ntBASIC1.78□□□□□ -2.12
MRE11P49959 AL645939.4-201ENST00000604495 135 ntBASIC1.78□□□□□ -2.12
MRE11P49959 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
MRE11P49959 RNU6-640P-201ENST00000363693 105 ntBASIC1.77□□□□□ -2.13
MRE11P49959 RNU4-67P-201ENST00000364569 141 ntBASIC1.77□□□□□ -2.13
MRE11P49959 RNU1-93P-201ENST00000364704 169 ntBASIC1.77□□□□□ -2.13
MRE11P49959 Y_RNA.544-201ENST00000384650 113 ntBASIC1.77□□□□□ -2.13
MRE11P49959 Y_RNA.155-201ENST00000363632 101 ntBASIC1.76□□□□□ -2.13
MRE11P49959 AC245047.7-201ENST00000440265 293 ntBASIC1.76□□□□□ -2.13
MRE11P49959 snoU13.9-201ENST00000458927 103 ntBASIC1.76□□□□□ -2.13
MRE11P49959 RNU6-970P-201ENST00000516312 107 ntBASIC1.76□□□□□ -2.13
MRE11P49959 RNU6-109P-201ENST00000516364 107 ntBASIC1.76□□□□□ -2.13
MRE11P49959 RNU6-184P-201ENST00000516514 107 ntBASIC1.76□□□□□ -2.13
MRE11P49959 RNU1-92P-201ENST00000517017 135 ntBASIC1.76□□□□□ -2.13
MRE11P49959 CYP3A52P-201ENST00000563326 91 ntBASIC1.76□□□□□ -2.13
MRE11P49959 MIR4421-201ENST00000578133 69 ntBASIC1.76□□□□□ -2.13
MRE11P49959 MIR3192-201ENST00000584920 77 ntBASIC1.76□□□□□ -2.13
MRE11P49959 Y_RNA.818-201ENST00000618813 71 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms