Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RNA5SP68-201ENST00000363885 119 ntBASIC2.5□□□□□ -2.01
CHRNA4P43681 MIR660-201ENST00000385235 97 ntBASIC2.5□□□□□ -2.01
CHRNA4P43681 SNORD90-201ENST00000391145 111 ntBASIC2.5□□□□□ -2.01
CHRNA4P43681 AC027119.1-201ENST00000440877 241 ntBASIC2.5□□□□□ -2.01
CHRNA4P43681 RNA5SP148-201ENST00000516527 94 ntBASIC2.5□□□□□ -2.01
CHRNA4P43681 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.5□□□□□ -2.01
CHRNA4P43681 AL449363.1-201ENST00000617815 186 ntBASIC2.5□□□□□ -2.01
CHRNA4P43681 RNU6-330P-201ENST00000363015 107 ntBASIC2.49□□□□□ -2.01
CHRNA4P43681 Y_RNA.443-201ENST00000384135 111 ntBASIC2.49□□□□□ -2.01
CHRNA4P43681 RNU6-154P-201ENST00000384306 106 ntBASIC2.49□□□□□ -2.01
CHRNA4P43681 SNORD38B-201ENST00000384690 67 ntBASIC2.49□□□□□ -2.01
CHRNA4P43681 RNU6-1254P-201ENST00000391266 104 ntBASIC2.49□□□□□ -2.01
CHRNA4P43681 BX276092.1-201ENST00000427368 251 ntBASIC2.49□□□□□ -2.01
CHRNA4P43681 SUMO1P4-201ENST00000429430 302 ntBASIC2.49□□□□□ -2.01
CHRNA4P43681 MIR5094-201ENST00000578766 85 ntBASIC2.49□□□□□ -2.01
CHRNA4P43681 SNORD38B-202ENST00000625943 69 ntBASIC2.49□□□□□ -2.01
CHRNA4P43681 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CHRNA4P43681 AP000648.3-201ENST00000623539 4507 ntBASIC2.49□□□□□ -2.01
CHRNA4P43681 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CHRNA4P43681 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CHRNA4P43681 AP006437.1-201ENST00000641440 3685 ntBASIC2.48□□□□□ -2.01
CHRNA4P43681 RNU1-58P-201ENST00000362413 163 ntBASIC2.48□□□□□ -2.01
CHRNA4P43681 RNA5SP456-201ENST00000364002 114 ntBASIC2.48□□□□□ -2.01
CHRNA4P43681 RNU6-669P-201ENST00000365575 107 ntBASIC2.48□□□□□ -2.01
CHRNA4P43681 DEFA7P-201ENST00000382676 285 ntBASIC2.48□□□□□ -2.01
CHRNA4P43681 RNU6-614P-201ENST00000384369 107 ntBASIC2.48□□□□□ -2.01
CHRNA4P43681 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CHRNA4P43681 RNU6-243P-201ENST00000391140 107 ntBASIC2.48□□□□□ -2.01
CHRNA4P43681 AL023284.1-201ENST00000403956 276 ntBASIC2.48□□□□□ -2.01
CHRNA4P43681 MIR548AO-201ENST00000579992 96 ntBASIC2.48□□□□□ -2.01
CHRNA4P43681 AC021506.2-201ENST00000612354 169 ntBASIC2.48□□□□□ -2.01
CHRNA4P43681 U6.59-201ENST00000615686 107 ntBASIC2.48□□□□□ -2.01
CHRNA4P43681 MIRLET7F1-201ENST00000362202 87 ntBASIC2.47□□□□□ -2.01
CHRNA4P43681 SNORA70B-201ENST00000384210 135 ntBASIC2.47□□□□□ -2.01
CHRNA4P43681 MIR518E-201ENST00000385252 88 ntBASIC2.47□□□□□ -2.01
CHRNA4P43681 RNU6-466P-201ENST00000391224 103 ntBASIC2.47□□□□□ -2.01
CHRNA4P43681 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CHRNA4P43681 HMGN2P39-201ENST00000398005 273 ntBASIC2.47□□□□□ -2.01
CHRNA4P43681 AC019129.1-201ENST00000403786 261 ntBASIC2.47□□□□□ -2.01
CHRNA4P43681 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.47□□□□□ -2.01
CHRNA4P43681 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.47□□□□□ -2.01
CHRNA4P43681 MIR4764-201ENST00000580680 88 ntBASIC2.47□□□□□ -2.01
CHRNA4P43681 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHRNA4P43681 RNU6-291P-201ENST00000384720 107 ntBASIC2.46□□□□□ -2.02
CHRNA4P43681 MIR516A2-201ENST00000384888 90 ntBASIC2.46□□□□□ -2.02
CHRNA4P43681 MIR516A1-201ENST00000385033 90 ntBASIC2.46□□□□□ -2.02
CHRNA4P43681 MIR504-201ENST00000385065 83 ntBASIC2.46□□□□□ -2.02
CHRNA4P43681 AC092628.1-201ENST00000436250 252 ntBASIC2.46□□□□□ -2.02
CHRNA4P43681 AC079150.2-201ENST00000443733 78 ntBASIC2.46□□□□□ -2.02
CHRNA4P43681 AC121758.2-201ENST00000553271 193 ntBASIC2.46□□□□□ -2.02
CHRNA4P43681 U4.3-201ENST00000621047 82 ntBASIC2.46□□□□□ -2.02
CHRNA4P43681 MIR7843-201ENST00000622274 79 ntBASIC2.46□□□□□ -2.02
CHRNA4P43681 AC103706.3-201ENST00000636297 85 ntBASIC2.46□□□□□ -2.02
CHRNA4P43681 U6.109-201ENST00000636749 87 ntBASIC2.46□□□□□ -2.02
CHRNA4P43681 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHRNA4P43681 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHRNA4P43681 Y_RNA.42-201ENST00000362660 108 ntBASIC2.45□□□□□ -2.02
CHRNA4P43681 AC011753.1-201ENST00000451001 220 ntBASIC2.45□□□□□ -2.02
CHRNA4P43681 snoU13.17-201ENST00000458802 104 ntBASIC2.45□□□□□ -2.02
CHRNA4P43681 AC026271.5-201ENST00000577873 130 ntBASIC2.45□□□□□ -2.02
CHRNA4P43681 MIR4511-201ENST00000582784 87 ntBASIC2.45□□□□□ -2.02
CHRNA4P43681 MIR3670-2-201ENST00000582974 65 ntBASIC2.45□□□□□ -2.02
CHRNA4P43681 MIR3670-1-201ENST00000584160 65 ntBASIC2.45□□□□□ -2.02
CHRNA4P43681 MIR3670-3-201ENST00000584855 65 ntBASIC2.45□□□□□ -2.02
CHRNA4P43681 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.45□□□□□ -2.02
CHRNA4P43681 MIR3670-4-201ENST00000612260 65 ntBASIC2.45□□□□□ -2.02
CHRNA4P43681 MIR21-201ENST00000362134 72 ntBASIC2.44□□□□□ -2.02
CHRNA4P43681 Y_RNA.119-201ENST00000363301 96 ntBASIC2.44□□□□□ -2.02
CHRNA4P43681 RNU6-340P-201ENST00000364005 107 ntBASIC2.44□□□□□ -2.02
CHRNA4P43681 RNU1-51P-201ENST00000365345 176 ntBASIC2.44□□□□□ -2.02
CHRNA4P43681 MIR29C-201ENST00000385231 88 ntBASIC2.44□□□□□ -2.02
CHRNA4P43681 AL359511.1-201ENST00000402970 211 ntBASIC2.44□□□□□ -2.02
CHRNA4P43681 SNORA31.15-201ENST00000516771 132 ntBASIC2.44□□□□□ -2.02
CHRNA4P43681 MIR4524B-201ENST00000581569 115 ntBASIC2.44□□□□□ -2.02
CHRNA4P43681 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHRNA4P43681 SNORD115-3-201ENST00000363100 82 ntBASIC2.43□□□□□ -2.02
CHRNA4P43681 RNU6-681P-201ENST00000364012 104 ntBASIC2.43□□□□□ -2.02
CHRNA4P43681 RNU6-895P-201ENST00000384125 103 ntBASIC2.43□□□□□ -2.02
CHRNA4P43681 AC110620.1-201ENST00000416042 228 ntBASIC2.43□□□□□ -2.02
CHRNA4P43681 AC104389.3-201ENST00000445629 235 ntBASIC2.43□□□□□ -2.02
CHRNA4P43681 AC245517.4-201ENST00000448601 281 ntBASIC2.43□□□□□ -2.02
CHRNA4P43681 AC099513.1-201ENST00000490423 301 ntBASIC2.43□□□□□ -2.02
CHRNA4P43681 MIR4658-201ENST00000584344 65 ntBASIC2.43□□□□□ -2.02
CHRNA4P43681 FO624990.1-201ENST00000636373 85 ntBASIC2.43□□□□□ -2.02
CHRNA4P43681 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CHRNA4P43681 RNU1-138P-201ENST00000384093 164 ntBASIC2.42□□□□□ -2.02
CHRNA4P43681 MIR4446-201ENST00000578505 67 ntBASIC2.42□□□□□ -2.02
CHRNA4P43681 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.42□□□□□ -2.02
CHRNA4P43681 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.42□□□□□ -2.02
CHRNA4P43681 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CHRNA4P43681 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHRNA4P43681 MIR6073-201ENST00000352083 89 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 SNORA67.1-201ENST00000364749 141 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 SNORD45A-201ENST00000384512 84 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 MIR633-201ENST00000384821 98 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 BX510359.4-201ENST00000423750 193 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 RNU7-26P-201ENST00000458980 63 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 snoU13.2-201ENST00000459201 104 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 AC026436.1-201ENST00000510537 270 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms