Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.54□□□□□ -2
RFC5P40937 AC012676.2-201ENST00000619258 186 ntBASIC2.54□□□□□ -2
RFC5P40937 MIR6766-201ENST00000622641 72 ntBASIC2.54□□□□□ -2
RFC5P40937 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RFC5P40937 AL596028.1-201ENST00000326971 197 ntBASIC2.53□□□□□ -2
RFC5P40937 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.53□□□□□ -2
RFC5P40937 RPL30P7-201ENST00000479312 323 ntBASIC2.53□□□□□ -2
RFC5P40937 RNA5SP82-201ENST00000516707 92 ntBASIC2.53□□□□□ -2
RFC5P40937 SEPT14P17-201ENST00000617978 177 ntBASIC2.53□□□□□ -2
RFC5P40937 AL359851.1-201ENST00000569460 4997 ntBASIC2.53□□□□□ -2
RFC5P40937 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFC5P40937 RNU6-1125P-201ENST00000363601 107 ntBASIC2.52□□□□□ -2.01
RFC5P40937 RNU6-573P-201ENST00000383938 106 ntBASIC2.52□□□□□ -2.01
RFC5P40937 RNU6-675P-201ENST00000384236 104 ntBASIC2.52□□□□□ -2.01
RFC5P40937 RNU6-480P-201ENST00000384332 107 ntBASIC2.52□□□□□ -2.01
RFC5P40937 HMGN2P23-201ENST00000456759 269 ntBASIC2.52□□□□□ -2.01
RFC5P40937 RNU7-62P-201ENST00000458856 62 ntBASIC2.52□□□□□ -2.01
RFC5P40937 MIR1273D-201ENST00000577266 86 ntBASIC2.52□□□□□ -2.01
RFC5P40937 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFC5P40937 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
RFC5P40937 MIR103A2-201ENST00000362154 78 ntBASIC2.51□□□□□ -2.01
RFC5P40937 Y_RNA.168-201ENST00000363740 102 ntBASIC2.51□□□□□ -2.01
RFC5P40937 Y_RNA.173-201ENST00000363776 113 ntBASIC2.51□□□□□ -2.01
RFC5P40937 SNORA70B-201ENST00000384210 135 ntBASIC2.51□□□□□ -2.01
RFC5P40937 RNU6-242P-201ENST00000384359 107 ntBASIC2.51□□□□□ -2.01
RFC5P40937 RNU6-1165P-201ENST00000410119 107 ntBASIC2.51□□□□□ -2.01
RFC5P40937 RNU6-402P-201ENST00000410678 103 ntBASIC2.51□□□□□ -2.01
RFC5P40937 MIR6740-201ENST00000618268 113 ntBASIC2.51□□□□□ -2.01
RFC5P40937 MIR1245B-201ENST00000636115 69 ntBASIC2.51□□□□□ -2.01
RFC5P40937 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.51□□□□□ -2.01
RFC5P40937 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RFC5P40937 HSBP1P2-201ENST00000299671 229 ntBASIC2.5□□□□□ -2.01
RFC5P40937 MIR302D-201ENST00000362275 68 ntBASIC2.5□□□□□ -2.01
RFC5P40937 Y_RNA.219-201ENST00000364232 113 ntBASIC2.5□□□□□ -2.01
RFC5P40937 SNORD1A-201ENST00000364968 72 ntBASIC2.5□□□□□ -2.01
RFC5P40937 RNU6-205P-201ENST00000390858 107 ntBASIC2.5□□□□□ -2.01
RFC5P40937 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.5□□□□□ -2.01
RFC5P40937 RN7SKP223-201ENST00000410582 62 ntBASIC2.5□□□□□ -2.01
RFC5P40937 RNU6-592P-201ENST00000411333 103 ntBASIC2.5□□□□□ -2.01
RFC5P40937 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.5□□□□□ -2.01
RFC5P40937 RNU1-98P-201ENST00000458992 160 ntBASIC2.5□□□□□ -2.01
RFC5P40937 RNA5SP233-201ENST00000459153 113 ntBASIC2.5□□□□□ -2.01
RFC5P40937 AC022137.1-201ENST00000483735 151 ntBASIC2.5□□□□□ -2.01
RFC5P40937 RPS27P21-201ENST00000486977 252 ntBASIC2.5□□□□□ -2.01
RFC5P40937 MIR4668-201ENST00000582284 70 ntBASIC2.5□□□□□ -2.01
RFC5P40937 AL627230.6-201ENST00000611129 280 ntBASIC2.5□□□□□ -2.01
RFC5P40937 MIR377-201ENST00000362145 69 ntBASIC2.49□□□□□ -2.01
RFC5P40937 RNA5SP264-201ENST00000363115 107 ntBASIC2.49□□□□□ -2.01
RFC5P40937 MT-TF-201ENST00000387314 71 ntBASIC2.49□□□□□ -2.01
RFC5P40937 AC005908.1-201ENST00000468701 347 ntBASIC2.49□□□□□ -2.01
RFC5P40937 AC019176.1-201ENST00000518519 225 ntBASIC2.49□□□□□ -2.01
RFC5P40937 AP003716.2-201ENST00000528260 108 ntBASIC2.49□□□□□ -2.01
RFC5P40937 MIR3937-201ENST00000580135 106 ntBASIC2.49□□□□□ -2.01
RFC5P40937 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.48□□□□□ -2.01
RFC5P40937 U8.2-201ENST00000363156 134 ntBASIC2.48□□□□□ -2.01
RFC5P40937 MIR221-201ENST00000385135 110 ntBASIC2.48□□□□□ -2.01
RFC5P40937 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RFC5P40937 RNU6-613P-201ENST00000410412 108 ntBASIC2.48□□□□□ -2.01
RFC5P40937 snoU13.25-201ENST00000458945 104 ntBASIC2.48□□□□□ -2.01
RFC5P40937 RNU1-41P-201ENST00000516161 162 ntBASIC2.48□□□□□ -2.01
RFC5P40937 RNU1-48P-201ENST00000516400 162 ntBASIC2.48□□□□□ -2.01
RFC5P40937 MIR6873-201ENST00000622788 63 ntBASIC2.48□□□□□ -2.01
RFC5P40937 MIR6516-201ENST00000630554 81 ntBASIC2.48□□□□□ -2.01
RFC5P40937 MIR30D-201ENST00000362283 70 ntBASIC2.47□□□□□ -2.01
RFC5P40937 SNORA67.3-201ENST00000384366 140 ntBASIC2.47□□□□□ -2.01
RFC5P40937 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RFC5P40937 RNA5SP200-201ENST00000516360 103 ntBASIC2.47□□□□□ -2.01
RFC5P40937 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.47□□□□□ -2.01
RFC5P40937 MIR3198-2-201ENST00000577868 80 ntBASIC2.47□□□□□ -2.01
RFC5P40937 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RFC5P40937 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RFC5P40937 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.46□□□□□ -2.02
RFC5P40937 MIR1185-1-201ENST00000408598 86 ntBASIC2.46□□□□□ -2.02
RFC5P40937 Y_RNA.620-201ENST00000411009 88 ntBASIC2.46□□□□□ -2.02
RFC5P40937 AC138749.4-201ENST00000563970 127 ntBASIC2.46□□□□□ -2.02
RFC5P40937 MIR6132-201ENST00000622083 109 ntBASIC2.46□□□□□ -2.02
RFC5P40937 RNU6-219P-201ENST00000364728 107 ntBASIC2.45□□□□□ -2.02
RFC5P40937 RNY1P4-201ENST00000384595 115 ntBASIC2.45□□□□□ -2.02
RFC5P40937 MIR144-201ENST00000384886 86 ntBASIC2.45□□□□□ -2.02
RFC5P40937 MIR4648-201ENST00000580107 72 ntBASIC2.45□□□□□ -2.02
RFC5P40937 AC090897.1-201ENST00000580909 226 ntBASIC2.45□□□□□ -2.02
RFC5P40937 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.45□□□□□ -2.02
RFC5P40937 U6.109-201ENST00000636749 87 ntBASIC2.45□□□□□ -2.02
RFC5P40937 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.45□□□□□ -2.02
RFC5P40937 HMGN2P19-201ENST00000425149 265 ntBASIC2.44□□□□□ -2.02
RFC5P40937 MIR4500-201ENST00000579472 76 ntBASIC2.44□□□□□ -2.02
RFC5P40937 MIR6895-201ENST00000613497 78 ntBASIC2.44□□□□□ -2.02
RFC5P40937 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RFC5P40937 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RFC5P40937 SNORA2B-201ENST00000384583 137 ntBASIC2.43□□□□□ -2.02
RFC5P40937 MIR181B2-201ENST00000385004 89 ntBASIC2.43□□□□□ -2.02
RFC5P40937 SNORA48.3-201ENST00000391081 134 ntBASIC2.43□□□□□ -2.02
RFC5P40937 Y_RNA.685-201ENST00000516532 108 ntBASIC2.43□□□□□ -2.02
RFC5P40937 AC121758.2-201ENST00000553271 193 ntBASIC2.43□□□□□ -2.02
RFC5P40937 MIR3664-201ENST00000579074 99 ntBASIC2.43□□□□□ -2.02
RFC5P40937 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.43□□□□□ -2.02
RFC5P40937 MIR3202-2-201ENST00000635980 79 ntBASIC2.43□□□□□ -2.02
RFC5P40937 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
RFC5P40937 Y_RNA.73-201ENST00000362910 113 ntBASIC2.42□□□□□ -2.02
RFC5P40937 RNA5SP133-201ENST00000363368 119 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms