Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU6-816P-201ENST00000390914 107 ntBASIC1.31□□□□□ -2.2
HOXC13P31276 RNU6-1268P-201ENST00000391214 107 ntBASIC1.31□□□□□ -2.2
HOXC13P31276 RNU6-1239P-201ENST00000391310 107 ntBASIC1.31□□□□□ -2.2
HOXC13P31276 RNU6-904P-201ENST00000516206 101 ntBASIC1.31□□□□□ -2.2
HOXC13P31276 RNU6-1116P-201ENST00000517269 99 ntBASIC1.31□□□□□ -2.2
HOXC13P31276 MIR4778-201ENST00000577635 80 ntBASIC1.31□□□□□ -2.2
HOXC13P31276 FAM106DP-201ENST00000586416 501 ntBASIC1.31□□□□□ -2.2
HOXC13P31276 SNORD115-40-201ENST00000606510 82 ntBASIC1.31□□□□□ -2.2
HOXC13P31276 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.31□□□□□ -2.2
HOXC13P31276 MALAT1.1-201ENST00000618249 95 ntBASIC1.31□□□□□ -2.2
HOXC13P31276 AC091932.4-201ENST00000623386 200 ntBASIC1.31□□□□□ -2.2
HOXC13P31276 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.3□□□□□ -2.2
HOXC13P31276 RNU6-1134P-201ENST00000365156 101 ntBASIC1.3□□□□□ -2.2
HOXC13P31276 RNA5SP482-201ENST00000391269 118 ntBASIC1.3□□□□□ -2.2
HOXC13P31276 AC107297.1-201ENST00000459991 176 ntBASIC1.3□□□□□ -2.2
HOXC13P31276 AC114811.1-201ENST00000507207 168 ntBASIC1.3□□□□□ -2.2
HOXC13P31276 MIR3163-201ENST00000581592 73 ntBASIC1.3□□□□□ -2.2
HOXC13P31276 MIR4762-201ENST00000585261 75 ntBASIC1.3□□□□□ -2.2
HOXC13P31276 Y_RNA.818-201ENST00000618813 71 ntBASIC1.3□□□□□ -2.2
HOXC13P31276 AC012676.2-201ENST00000619258 186 ntBASIC1.3□□□□□ -2.2
HOXC13P31276 AL162726.3-218ENST00000636401 95 ntBASIC1.3□□□□□ -2.2
HOXC13P31276 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HOXC13P31276 RNY3P2-201ENST00000362918 102 ntBASIC1.29□□□□□ -2.2
HOXC13P31276 Y_RNA.78-201ENST00000362970 110 ntBASIC1.29□□□□□ -2.2
HOXC13P31276 U8.5-201ENST00000364528 136 ntBASIC1.29□□□□□ -2.2
HOXC13P31276 Y_RNA.342-201ENST00000365352 113 ntBASIC1.29□□□□□ -2.2
HOXC13P31276 Y_RNA.494-201ENST00000384432 111 ntBASIC1.29□□□□□ -2.2
HOXC13P31276 Y_RNA.531-201ENST00000384589 121 ntBASIC1.29□□□□□ -2.2
HOXC13P31276 AL512326.2-201ENST00000426359 151 ntBASIC1.29□□□□□ -2.2
HOXC13P31276 RNU7-80P-201ENST00000459562 61 ntBASIC1.29□□□□□ -2.2
HOXC13P31276 RNU7-12P-201ENST00000516030 62 ntBASIC1.29□□□□□ -2.2
HOXC13P31276 RN7SKP12-201ENST00000516275 143 ntBASIC1.29□□□□□ -2.2
HOXC13P31276 AC026421.1-201ENST00000519101 163 ntBASIC1.29□□□□□ -2.2
HOXC13P31276 AP003327.1-201ENST00000529684 127 ntBASIC1.29□□□□□ -2.2
HOXC13P31276 DEFB131E-201ENST00000532329 154 ntBASIC1.29□□□□□ -2.2
HOXC13P31276 MIR2052-201ENST00000636055 55 ntBASIC1.29□□□□□ -2.2
HOXC13P31276 MIR302B-201ENST00000362188 73 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 Y_RNA.107-201ENST00000363190 121 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 Y_RNA.241-201ENST00000364470 117 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 Y_RNA.336-201ENST00000365307 109 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 RNU6-424P-201ENST00000384367 105 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 RNU6-163P-201ENST00000384396 106 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 MIR450A2-201ENST00000385022 100 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 U8.16-201ENST00000391279 133 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 MIR548J-201ENST00000408833 112 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 AC113410.1-201ENST00000505029 247 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 RNU6-322P-201ENST00000516010 103 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 RNU6-162P-201ENST00000516228 103 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 RNU6-922P-201ENST00000516753 99 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 Y_RNA.773-201ENST00000607168 90 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 GHRLOS.1-201ENST00000610995 70 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 MIR1255B1-201ENST00000636325 63 ntBASIC1.28□□□□□ -2.2
HOXC13P31276 Y_RNA.93-201ENST00000363066 109 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 Y_RNA.155-201ENST00000363632 101 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 RNU4-36P-201ENST00000364294 144 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 Y_RNA.454-201ENST00000384224 113 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 RNU6-820P-201ENST00000384273 107 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 SNORA27-201ENST00000384323 126 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 SNORD38C-201ENST00000384381 69 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 SNORA25-201ENST00000384384 134 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 MIR605-201ENST00000385078 83 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
HOXC13P31276 RNU6-1275P-201ENST00000391087 107 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 AC015922.2-201ENST00000435593 184 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 AC087499.4-201ENST00000448505 178 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 RNU6-893P-201ENST00000458841 100 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 RNU7-45P-201ENST00000459460 63 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 SNORA31.4-201ENST00000516049 129 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 SCARNA23-201ENST00000516060 130 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 RNU6-795P-201ENST00000516323 103 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 RNA5SP404-201ENST00000517118 132 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 RNU7-181P-201ENST00000517234 74 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 MIR548Z-201ENST00000584743 97 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 AC087741.2-201ENST00000619415 172 ntBASIC1.27□□□□□ -2.21
HOXC13P31276 RNU6-1099P-201ENST00000363533 107 ntBASIC1.26□□□□□ -2.21
HOXC13P31276 MIR653-201ENST00000385279 96 ntBASIC1.26□□□□□ -2.21
HOXC13P31276 RNU6-644P-201ENST00000391155 98 ntBASIC1.26□□□□□ -2.21
HOXC13P31276 MIR1912-201ENST00000410389 80 ntBASIC1.26□□□□□ -2.21
HOXC13P31276 RNA5SP144-201ENST00000410846 116 ntBASIC1.26□□□□□ -2.21
HOXC13P31276 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.26□□□□□ -2.21
HOXC13P31276 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.26□□□□□ -2.21
HOXC13P31276 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.26□□□□□ -2.21
HOXC13P31276 RNU7-61P-201ENST00000515897 61 ntBASIC1.26□□□□□ -2.21
HOXC13P31276 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.26□□□□□ -2.21
HOXC13P31276 RNU6-158P-201ENST00000517104 100 ntBASIC1.26□□□□□ -2.21
HOXC13P31276 AC004812.1-201ENST00000540773 146 ntBASIC1.26□□□□□ -2.21
HOXC13P31276 AC012531.4-201ENST00000616509 177 ntBASIC1.26□□□□□ -2.21
HOXC13P31276 Y_RNA.17-201ENST00000362433 111 ntBASIC1.25□□□□□ -2.21
HOXC13P31276 Y_RNA.171-201ENST00000363760 102 ntBASIC1.25□□□□□ -2.21
HOXC13P31276 RNU1-124P-201ENST00000363861 145 ntBASIC1.25□□□□□ -2.21
HOXC13P31276 Y_RNA.290-201ENST00000364879 114 ntBASIC1.25□□□□□ -2.21
HOXC13P31276 Y_RNA.507-201ENST00000384500 99 ntBASIC1.25□□□□□ -2.21
HOXC13P31276 MIR222-201ENST00000384992 110 ntBASIC1.25□□□□□ -2.21
HOXC13P31276 AL451046.2-201ENST00000403074 277 ntBASIC1.25□□□□□ -2.21
HOXC13P31276 Y_RNA.593-201ENST00000410292 98 ntBASIC1.25□□□□□ -2.21
HOXC13P31276 SNORA7.5-201ENST00000410672 110 ntBASIC1.25□□□□□ -2.21
HOXC13P31276 AL022718.1-201ENST00000412004 84 ntBASIC1.25□□□□□ -2.21
HOXC13P31276 AL035398.1-201ENST00000430869 322 ntBASIC1.25□□□□□ -2.21
HOXC13P31276 RNU2-11P-201ENST00000459191 187 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms