Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MIR5701-2-201ENST00000615634 82 ntBASIC-2.25□□□□□ -2.77
CLIP1P30622 SNORD115-27-201ENST00000364430 82 ntBASIC-2.26□□□□□ -2.77
CLIP1P30622 MTND3P16-201ENST00000452205 344 ntBASIC-2.26□□□□□ -2.77
CLIP1P30622 RNU7-48P-201ENST00000458875 63 ntBASIC-2.26□□□□□ -2.77
CLIP1P30622 RNU7-113P-201ENST00000459273 62 ntBASIC-2.26□□□□□ -2.77
CLIP1P30622 MIR4999-201ENST00000585029 91 ntBASIC-2.26□□□□□ -2.77
CLIP1P30622 AP001506.1-201ENST00000615444 211 ntBASIC-2.26□□□□□ -2.77
CLIP1P30622 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.27□□□□□ -2.77
CLIP1P30622 RNU6-254P-201ENST00000363377 107 ntBASIC-2.27□□□□□ -2.77
CLIP1P30622 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.27□□□□□ -2.77
CLIP1P30622 RNU4-68P-201ENST00000364314 141 ntBASIC-2.27□□□□□ -2.77
CLIP1P30622 Y_RNA.304-201ENST00000365011 112 ntBASIC-2.27□□□□□ -2.77
CLIP1P30622 SNORD42B-201ENST00000458893 67 ntBASIC-2.27□□□□□ -2.77
CLIP1P30622 AC108081.1-201ENST00000604358 221 ntBASIC-2.27□□□□□ -2.77
CLIP1P30622 SNORA63.6-201ENST00000364921 119 ntBASIC-2.28□□□□□ -2.77
CLIP1P30622 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.28□□□□□ -2.77
CLIP1P30622 AL353691.2-201ENST00000443795 59 ntBASIC-2.28□□□□□ -2.77
CLIP1P30622 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.28□□□□□ -2.77
CLIP1P30622 RNU6-397P-201ENST00000516226 104 ntBASIC-2.28□□□□□ -2.77
CLIP1P30622 Y_RNA.212-201ENST00000364177 102 ntBASIC-2.29□□□□□ -2.78
CLIP1P30622 Y_RNA.342-201ENST00000365352 113 ntBASIC-2.29□□□□□ -2.78
CLIP1P30622 RNU6-596P-201ENST00000365395 98 ntBASIC-2.29□□□□□ -2.78
CLIP1P30622 Y_RNA.448-201ENST00000384185 108 ntBASIC-2.29□□□□□ -2.78
CLIP1P30622 RNU6-83P-201ENST00000384568 112 ntBASIC-2.29□□□□□ -2.78
CLIP1P30622 MIR216B-201ENST00000390186 82 ntBASIC-2.29□□□□□ -2.78
CLIP1P30622 RNU6-308P-201ENST00000390957 107 ntBASIC-2.29□□□□□ -2.78
CLIP1P30622 SNORD37.1-201ENST00000390968 65 ntBASIC-2.29□□□□□ -2.78
CLIP1P30622 AC083904.1-201ENST00000487828 231 ntBASIC-2.29□□□□□ -2.78
CLIP1P30622 AC108019.1-201ENST00000512540 175 ntBASIC-2.29□□□□□ -2.78
CLIP1P30622 RNU6-168P-201ENST00000516189 101 ntBASIC-2.29□□□□□ -2.78
CLIP1P30622 MIR5197-201ENST00000583721 112 ntBASIC-2.29□□□□□ -2.78
CLIP1P30622 AC090617.8-201ENST00000623339 167 ntBASIC-2.29□□□□□ -2.78
CLIP1P30622 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.3□□□□□ -2.78
CLIP1P30622 Y_RNA.159-201ENST00000363674 87 ntBASIC-2.3□□□□□ -2.78
CLIP1P30622 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-2.3□□□□□ -2.78
CLIP1P30622 RNA5SP401-201ENST00000515920 127 ntBASIC-2.3□□□□□ -2.78
CLIP1P30622 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.3□□□□□ -2.78
CLIP1P30622 RNU6-850P-201ENST00000516934 103 ntBASIC-2.3□□□□□ -2.78
CLIP1P30622 MIR548AE2-201ENST00000583456 67 ntBASIC-2.3□□□□□ -2.78
CLIP1P30622 AC099654.14-201ENST00000638599 341 ntBASIC-2.3□□□□□ -2.78
CLIP1P30622 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 SNORD115-19-201ENST00000363098 82 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 Y_RNA.105-201ENST00000363182 111 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 SNORD115-18-201ENST00000363293 82 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 RNU6-1059P-201ENST00000363752 98 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 RNU6-801P-201ENST00000364087 105 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 SNORD115-17-201ENST00000364612 82 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 SNORD115-20-201ENST00000365099 82 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 Y_RNA.381-201ENST00000365666 102 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 AC024067.1-201ENST00000426199 223 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-2.31□□□□□ -2.78
CLIP1P30622 RNU6-559P-201ENST00000516151 98 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 MIR3145-201ENST00000580727 82 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 AC097639.2-201ENST00000603159 172 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 AP001362.1-201ENST00000625165 124 ntBASIC-2.31□□□□□ -2.78
CLIP1P30622 Y_RNA.98-201ENST00000363109 102 ntBASIC-2.32□□□□□ -2.78
CLIP1P30622 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.32□□□□□ -2.78
CLIP1P30622 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.32□□□□□ -2.78
CLIP1P30622 RNU6-500P-201ENST00000362349 107 ntBASIC-2.33□□□□□ -2.78
CLIP1P30622 Y_RNA.127-201ENST00000363386 109 ntBASIC-2.33□□□□□ -2.78
CLIP1P30622 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.33□□□□□ -2.78
CLIP1P30622 RNU6-80P-201ENST00000384195 107 ntBASIC-2.33□□□□□ -2.78
CLIP1P30622 Y_RNA.515-201ENST00000384535 112 ntBASIC-2.33□□□□□ -2.78
CLIP1P30622 RNU6-21P-201ENST00000384710 107 ntBASIC-2.33□□□□□ -2.78
CLIP1P30622 RNU6-1158P-201ENST00000391167 107 ntBASIC-2.33□□□□□ -2.78
CLIP1P30622 RPL35AP4-201ENST00000412007 102 ntBASIC-2.33□□□□□ -2.78
CLIP1P30622 AC113618.1-201ENST00000416747 285 ntBASIC-2.33□□□□□ -2.78
CLIP1P30622 RNU7-70P-201ENST00000516941 66 ntBASIC-2.33□□□□□ -2.78
CLIP1P30622 RNU6-1057P-201ENST00000517162 102 ntBASIC-2.33□□□□□ -2.78
CLIP1P30622 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.33□□□□□ -2.78
CLIP1P30622 Y_RNA.91-201ENST00000363042 107 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 Y_RNA.120-201ENST00000363304 110 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 RNY1P11-201ENST00000363759 113 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 RNU4-17P-201ENST00000365598 141 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 MIR206-201ENST00000384872 86 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 RNU6-1307P-201ENST00000391012 103 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 RNU6-400P-201ENST00000391173 106 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 SNORD115-47-201ENST00000391226 86 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 RNA5SP144-201ENST00000410846 116 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 MTND1P34-201ENST00000438556 671 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 AC090616.4-201ENST00000448026 115 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 MIR1270-201ENST00000459320 83 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 U6.96-201ENST00000636425 70 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 RNU6-1252P-201ENST00000363054 104 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 RNU6-647P-201ENST00000364243 107 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 RNU6-102P-201ENST00000384485 104 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 SNORA40.3-201ENST00000390964 122 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 RNU6-126P-201ENST00000516685 103 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 SNORA18.6-201ENST00000516792 115 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-2.34□□□□□ -2.78
CLIP1P30622 MIR4756-201ENST00000577874 78 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 AL022161.1-201ENST00000604390 213 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 AC005014.2-201ENST00000607795 599 ntBASIC-2.34□□□□□ -2.78
CLIP1P30622 SNORD81.1-201ENST00000363064 77 ntBASIC-2.35□□□□□ -2.79
CLIP1P30622 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.35□□□□□ -2.79
CLIP1P30622 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.35□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 273.6 ms