Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNA5SP82-201ENST00000516707 92 ntBASIC2.51□□□□□ -2.01
RXRBP28702 MIR4446-201ENST00000578505 67 ntBASIC2.51□□□□□ -2.01
RXRBP28702 MIR8055-201ENST00000610739 97 ntBASIC2.51□□□□□ -2.01
RXRBP28702 AC021506.2-201ENST00000612354 169 ntBASIC2.51□□□□□ -2.01
RXRBP28702 AC243994.1-201ENST00000618627 109 ntBASIC2.51□□□□□ -2.01
RXRBP28702 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.51□□□□□ -2.01
RXRBP28702 AC006160.2-201ENST00000637708 154 ntBASIC2.51□□□□□ -2.01
RXRBP28702 SNORD116-10-201ENST00000363791 102 ntBASIC2.5□□□□□ -2.01
RXRBP28702 Y_RNA.437-201ENST00000384113 113 ntBASIC2.5□□□□□ -2.01
RXRBP28702 RNU1-52P-201ENST00000384190 164 ntBASIC2.5□□□□□ -2.01
RXRBP28702 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.5□□□□□ -2.01
RXRBP28702 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.5□□□□□ -2.01
RXRBP28702 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
RXRBP28702 RNY1P4-201ENST00000384595 115 ntBASIC2.49□□□□□ -2.01
RXRBP28702 MIR206-201ENST00000384872 86 ntBASIC2.49□□□□□ -2.01
RXRBP28702 RNA5SP261-201ENST00000410536 106 ntBASIC2.49□□□□□ -2.01
RXRBP28702 AC079804.2-201ENST00000490376 200 ntBASIC2.49□□□□□ -2.01
RXRBP28702 RNU7-2P-201ENST00000516096 62 ntBASIC2.49□□□□□ -2.01
RXRBP28702 SUB1P4-201ENST00000566062 339 ntBASIC2.49□□□□□ -2.01
RXRBP28702 MIR4255-201ENST00000579351 72 ntBASIC2.49□□□□□ -2.01
RXRBP28702 AC096720.1-201ENST00000604441 183 ntBASIC2.49□□□□□ -2.01
RXRBP28702 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RXRBP28702 AC005336.3-201ENST00000623833 2679 ntBASIC2.48□□□□□ -2.01
RXRBP28702 RNU6-296P-201ENST00000384608 107 ntBASIC2.48□□□□□ -2.01
RXRBP28702 RNU6-950P-201ENST00000384651 107 ntBASIC2.48□□□□□ -2.01
RXRBP28702 RNU11-3P-201ENST00000391111 133 ntBASIC2.48□□□□□ -2.01
RXRBP28702 HMGN2P39-201ENST00000398005 273 ntBASIC2.48□□□□□ -2.01
RXRBP28702 RNU7-35P-201ENST00000517174 62 ntBASIC2.48□□□□□ -2.01
RXRBP28702 MIR502-201ENST00000606349 86 ntBASIC2.48□□□□□ -2.01
RXRBP28702 RNU6-86P-201ENST00000606534 107 ntBASIC2.48□□□□□ -2.01
RXRBP28702 AC103810.7-201ENST00000607821 91 ntBASIC2.48□□□□□ -2.01
RXRBP28702 Y_RNA.354-201ENST00000365448 111 ntBASIC2.47□□□□□ -2.01
RXRBP28702 MIR34C-201ENST00000384831 77 ntBASIC2.47□□□□□ -2.01
RXRBP28702 MIR8065-201ENST00000620577 100 ntBASIC2.47□□□□□ -2.01
RXRBP28702 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
RXRBP28702 RNU6-509P-201ENST00000363519 107 ntBASIC2.46□□□□□ -2.02
RXRBP28702 MIR518A2-201ENST00000384966 87 ntBASIC2.46□□□□□ -2.02
RXRBP28702 MIR660-201ENST00000385235 97 ntBASIC2.46□□□□□ -2.02
RXRBP28702 MIR4285-201ENST00000581001 85 ntBASIC2.46□□□□□ -2.02
RXRBP28702 AL513423.1-201ENST00000621695 132 ntBASIC2.46□□□□□ -2.02
RXRBP28702 MIR548BB-201ENST00000626714 66 ntBASIC2.46□□□□□ -2.02
RXRBP28702 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.46□□□□□ -2.02
RXRBP28702 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
RXRBP28702 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
RXRBP28702 RNU6-112P-201ENST00000363599 104 ntBASIC2.45□□□□□ -2.02
RXRBP28702 RNU6-1296P-201ENST00000383879 107 ntBASIC2.45□□□□□ -2.02
RXRBP28702 Y_RNA.537-201ENST00000384626 109 ntBASIC2.45□□□□□ -2.02
RXRBP28702 SNORA48.1-201ENST00000390879 135 ntBASIC2.45□□□□□ -2.02
RXRBP28702 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.45□□□□□ -2.02
RXRBP28702 AC020891.4-201ENST00000605745 93 ntBASIC2.45□□□□□ -2.02
RXRBP28702 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RXRBP28702 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
RXRBP28702 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.44□□□□□ -2.02
RXRBP28702 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.44□□□□□ -2.02
RXRBP28702 RNU6-633P-201ENST00000362612 103 ntBASIC2.44□□□□□ -2.02
RXRBP28702 SNORD38.1-201ENST00000363863 68 ntBASIC2.44□□□□□ -2.02
RXRBP28702 Y_RNA.426-201ENST00000384068 113 ntBASIC2.44□□□□□ -2.02
RXRBP28702 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RXRBP28702 Y_RNA.611-201ENST00000410682 108 ntBASIC2.44□□□□□ -2.02
RXRBP28702 RPS29P11-201ENST00000496507 171 ntBASIC2.44□□□□□ -2.02
RXRBP28702 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.44□□□□□ -2.02
RXRBP28702 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.44□□□□□ -2.02
RXRBP28702 RNU6-1244P-201ENST00000363614 108 ntBASIC2.43□□□□□ -2.02
RXRBP28702 RNU6-24P-201ENST00000384440 107 ntBASIC2.43□□□□□ -2.02
RXRBP28702 MIR520A-201ENST00000384862 85 ntBASIC2.43□□□□□ -2.02
RXRBP28702 MIR598-201ENST00000384868 97 ntBASIC2.43□□□□□ -2.02
RXRBP28702 MIR144-201ENST00000384886 86 ntBASIC2.43□□□□□ -2.02
RXRBP28702 RNU6-613P-201ENST00000410412 108 ntBASIC2.43□□□□□ -2.02
RXRBP28702 snoU13.16-201ENST00000459350 104 ntBASIC2.43□□□□□ -2.02
RXRBP28702 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.43□□□□□ -2.02
RXRBP28702 MIR5694-201ENST00000581190 76 ntBASIC2.43□□□□□ -2.02
RXRBP28702 AC245884.12-201ENST00000615364 59 ntBASIC2.43□□□□□ -2.02
RXRBP28702 U1.36-201ENST00000620684 176 ntBASIC2.43□□□□□ -2.02
RXRBP28702 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.43□□□□□ -2.02
RXRBP28702 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.43□□□□□ -2.02
RXRBP28702 Z97988.1-201ENST00000637697 135 ntBASIC2.43□□□□□ -2.02
RXRBP28702 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RXRBP28702 SNORD115-27-201ENST00000364430 82 ntBASIC2.42□□□□□ -2.02
RXRBP28702 AC245047.7-201ENST00000440265 293 ntBASIC2.42□□□□□ -2.02
RXRBP28702 SNORD67.1-201ENST00000516618 108 ntBASIC2.42□□□□□ -2.02
RXRBP28702 SNORA74.3-201ENST00000517108 154 ntBASIC2.42□□□□□ -2.02
RXRBP28702 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.42□□□□□ -2.02
RXRBP28702 RNU6-1321P-201ENST00000390905 107 ntBASIC2.41□□□□□ -2.02
RXRBP28702 RNA5SP501-201ENST00000410990 112 ntBASIC2.41□□□□□ -2.02
RXRBP28702 RNU6-602P-201ENST00000411155 105 ntBASIC2.41□□□□□ -2.02
RXRBP28702 RPL23AP6-201ENST00000446637 472 ntBASIC2.41□□□□□ -2.02
RXRBP28702 SNORA31.25-201ENST00000517242 134 ntBASIC2.41□□□□□ -2.02
RXRBP28702 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
RXRBP28702 Y_RNA.94-201ENST00000363068 106 ntBASIC2.4□□□□□ -2.03
RXRBP28702 SNORA7.1-201ENST00000363750 139 ntBASIC2.4□□□□□ -2.03
RXRBP28702 RNU6-652P-201ENST00000365488 107 ntBASIC2.4□□□□□ -2.03
RXRBP28702 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.4□□□□□ -2.03
RXRBP28702 Y_RNA.609-201ENST00000410669 89 ntBASIC2.4□□□□□ -2.03
RXRBP28702 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.4□□□□□ -2.03
RXRBP28702 AC121758.2-201ENST00000553271 193 ntBASIC2.4□□□□□ -2.03
RXRBP28702 MIR4529-201ENST00000578110 78 ntBASIC2.4□□□□□ -2.03
RXRBP28702 FAM106DP-201ENST00000586416 501 ntBASIC2.4□□□□□ -2.03
RXRBP28702 SNORD3E-202ENST00000627253 216 ntBASIC2.4□□□□□ -2.03
RXRBP28702 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RXRBP28702 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms