Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 Y_RNA.330-201ENST00000365230 109 ntBASIC1.48□□□□□ -2.17
PTX3P26022 RNU6-949P-201ENST00000384040 107 ntBASIC1.48□□□□□ -2.17
PTX3P26022 MIR517C-201ENST00000385103 95 ntBASIC1.48□□□□□ -2.17
PTX3P26022 SNORD111-201ENST00000408139 94 ntBASIC1.48□□□□□ -2.17
PTX3P26022 RNU6-447P-201ENST00000410293 104 ntBASIC1.48□□□□□ -2.17
PTX3P26022 RNU6-1118P-201ENST00000410382 104 ntBASIC1.48□□□□□ -2.17
PTX3P26022 RNU6-1076P-201ENST00000410397 104 ntBASIC1.48□□□□□ -2.17
PTX3P26022 RNU6-355P-201ENST00000410427 104 ntBASIC1.48□□□□□ -2.17
PTX3P26022 RNU6-791P-201ENST00000410467 104 ntBASIC1.48□□□□□ -2.17
PTX3P26022 RNU6-705P-201ENST00000410601 104 ntBASIC1.48□□□□□ -2.17
PTX3P26022 RNU6-1100P-201ENST00000410691 104 ntBASIC1.48□□□□□ -2.17
PTX3P26022 RNU6-860P-201ENST00000410860 104 ntBASIC1.48□□□□□ -2.17
PTX3P26022 RNU6-1217P-201ENST00000411276 104 ntBASIC1.48□□□□□ -2.17
PTX3P26022 RNU6-785P-201ENST00000411324 104 ntBASIC1.48□□□□□ -2.17
PTX3P26022 MIR18B-201ENST00000454574 71 ntBASIC1.48□□□□□ -2.17
PTX3P26022 RNU7-90P-201ENST00000459216 62 ntBASIC1.48□□□□□ -2.17
PTX3P26022 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.48□□□□□ -2.17
PTX3P26022 MIR5009-201ENST00000578736 100 ntBASIC1.48□□□□□ -2.17
PTX3P26022 SNORA4-201ENST00000584302 138 ntBASIC1.48□□□□□ -2.17
PTX3P26022 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
PTX3P26022 U6.90-201ENST00000614007 104 ntBASIC1.48□□□□□ -2.17
PTX3P26022 U6.70-201ENST00000620287 104 ntBASIC1.48□□□□□ -2.17
PTX3P26022 MIR30D-201ENST00000362283 70 ntBASIC1.47□□□□□ -2.17
PTX3P26022 RNU4-67P-201ENST00000364569 141 ntBASIC1.47□□□□□ -2.17
PTX3P26022 U8.6-201ENST00000364939 135 ntBASIC1.47□□□□□ -2.17
PTX3P26022 SNORD115-35-201ENST00000365122 82 ntBASIC1.47□□□□□ -2.17
PTX3P26022 RNA5SP190-201ENST00000365222 118 ntBASIC1.47□□□□□ -2.17
PTX3P26022 RNU6-1014P-201ENST00000383940 103 ntBASIC1.47□□□□□ -2.17
PTX3P26022 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.47□□□□□ -2.17
PTX3P26022 RPL39P25-201ENST00000449384 154 ntBASIC1.47□□□□□ -2.17
PTX3P26022 SNORD53B-201ENST00000577887 78 ntBASIC1.47□□□□□ -2.17
PTX3P26022 AL161722.3-201ENST00000605789 2983 ntBASIC1.47□□□□□ -2.17
PTX3P26022 AC012676.2-201ENST00000619258 186 ntBASIC1.47□□□□□ -2.17
PTX3P26022 MIR1255B1-201ENST00000636325 63 ntBASIC1.47□□□□□ -2.17
PTX3P26022 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PTX3P26022 RNU6-409P-201ENST00000384114 104 ntBASIC1.46□□□□□ -2.18
PTX3P26022 SNORA2B-201ENST00000384583 137 ntBASIC1.46□□□□□ -2.18
PTX3P26022 MIR1304-201ENST00000408243 91 ntBASIC1.46□□□□□ -2.18
PTX3P26022 RNA5SP95-201ENST00000410319 137 ntBASIC1.46□□□□□ -2.18
PTX3P26022 PDCD5P2-201ENST00000507570 312 ntBASIC1.46□□□□□ -2.18
PTX3P26022 RNU7-2P-201ENST00000516096 62 ntBASIC1.46□□□□□ -2.18
PTX3P26022 RNU7-137P-201ENST00000516788 62 ntBASIC1.46□□□□□ -2.18
PTX3P26022 AC036111.3-201ENST00000526389 112 ntBASIC1.46□□□□□ -2.18
PTX3P26022 AC106800.4-201ENST00000614905 153 ntBASIC1.46□□□□□ -2.18
PTX3P26022 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
PTX3P26022 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
PTX3P26022 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.45□□□□□ -2.18
PTX3P26022 SNORD67.1-201ENST00000516618 108 ntBASIC1.45□□□□□ -2.18
PTX3P26022 RNU6-548P-201ENST00000517083 115 ntBASIC1.45□□□□□ -2.18
PTX3P26022 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
PTX3P26022 Y_RNA.155-201ENST00000363632 101 ntBASIC1.44□□□□□ -2.18
PTX3P26022 SNORD26-201ENST00000384147 75 ntBASIC1.44□□□□□ -2.18
PTX3P26022 MIR206-201ENST00000384872 86 ntBASIC1.44□□□□□ -2.18
PTX3P26022 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
PTX3P26022 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.44□□□□□ -2.18
PTX3P26022 SNORA67.5-201ENST00000391036 107 ntBASIC1.44□□□□□ -2.18
PTX3P26022 MIR1302-5-201ENST00000408164 150 ntBASIC1.44□□□□□ -2.18
PTX3P26022 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.44□□□□□ -2.18
PTX3P26022 RNU6-733P-201ENST00000410759 104 ntBASIC1.44□□□□□ -2.18
PTX3P26022 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.44□□□□□ -2.18
PTX3P26022 RNU6-1018P-201ENST00000516577 106 ntBASIC1.44□□□□□ -2.18
PTX3P26022 Y_RNA.116-201ENST00000363292 103 ntBASIC1.43□□□□□ -2.18
PTX3P26022 Y_RNA.163-201ENST00000363702 113 ntBASIC1.43□□□□□ -2.18
PTX3P26022 SNORA25-201ENST00000384384 134 ntBASIC1.43□□□□□ -2.18
PTX3P26022 SNORA67.6-201ENST00000391093 99 ntBASIC1.43□□□□□ -2.18
PTX3P26022 MTATP6P29-201ENST00000415057 132 ntBASIC1.43□□□□□ -2.18
PTX3P26022 RNU6-521P-201ENST00000516663 105 ntBASIC1.43□□□□□ -2.18
PTX3P26022 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.43□□□□□ -2.18
PTX3P26022 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
PTX3P26022 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
PTX3P26022 RNU6-106P-201ENST00000384405 107 ntBASIC1.42□□□□□ -2.18
PTX3P26022 SNORD13-201ENST00000459299 104 ntBASIC1.42□□□□□ -2.18
PTX3P26022 SNORA31.24-201ENST00000517232 57 ntBASIC1.42□□□□□ -2.18
PTX3P26022 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
PTX3P26022 SNORA63.4-201ENST00000362763 126 ntBASIC1.41□□□□□ -2.18
PTX3P26022 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
PTX3P26022 RNU6-1113P-201ENST00000384348 107 ntBASIC1.41□□□□□ -2.18
PTX3P26022 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
PTX3P26022 SNORA7.5-201ENST00000410672 110 ntBASIC1.41□□□□□ -2.18
PTX3P26022 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.41□□□□□ -2.18
PTX3P26022 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.41□□□□□ -2.18
PTX3P26022 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
PTX3P26022 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
PTX3P26022 AL391516.1-201ENST00000554380 2449 ntBASIC1.4□□□□□ -2.18
PTX3P26022 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
PTX3P26022 Y_RNA.78-201ENST00000362970 110 ntBASIC1.4□□□□□ -2.19
PTX3P26022 Y_RNA.98-201ENST00000363109 102 ntBASIC1.4□□□□□ -2.19
PTX3P26022 MIR222-201ENST00000384992 110 ntBASIC1.4□□□□□ -2.19
PTX3P26022 MIR1323-201ENST00000408090 73 ntBASIC1.4□□□□□ -2.19
PTX3P26022 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
PTX3P26022 AL591806.2-201ENST00000433122 173 ntBASIC1.4□□□□□ -2.19
PTX3P26022 AL031737.1-201ENST00000450125 223 ntBASIC1.4□□□□□ -2.19
PTX3P26022 AC133485.1-201ENST00000567176 124 ntBASIC1.4□□□□□ -2.19
PTX3P26022 MIR4694-201ENST00000578534 80 ntBASIC1.4□□□□□ -2.19
PTX3P26022 uc_338.28-201ENST00000612082 187 ntBASIC1.4□□□□□ -2.19
PTX3P26022 uc_338.6-201ENST00000613544 171 ntBASIC1.4□□□□□ -2.19
PTX3P26022 AC008163.1-202ENST00000636004 2889 ntBASIC1.4□□□□□ -2.19
PTX3P26022 RNU6-1313P-201ENST00000362622 102 ntBASIC1.39□□□□□ -2.19
PTX3P26022 RNU6-865P-201ENST00000364772 107 ntBASIC1.39□□□□□ -2.19
PTX3P26022 Y_RNA.360-201ENST00000365512 102 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 224.3 ms