Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
TNFAIP3P21580 RNU6-349P-201ENST00000362402 107 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 RNU6-369P-201ENST00000362515 102 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 RNU6-508P-201ENST00000363231 103 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 Y_RNA.171-201ENST00000363760 102 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 Y_RNA.398-201ENST00000383952 99 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 MIR520F-201ENST00000384824 87 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 MIR573-201ENST00000384964 99 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 PCNPP3-201ENST00000393579 471 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 RNU6-394P-201ENST00000410735 107 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 RPL39P25-201ENST00000449384 154 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 RNA5SP220-201ENST00000516298 104 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 MIR5000-201ENST00000577717 103 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 MIR3668-201ENST00000582138 75 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 AC020891.4-201ENST00000605745 93 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 AC098479.1-201ENST00000609225 154 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 MIR6734-201ENST00000621166 68 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 MIR6841-201ENST00000637129 72 ntBASIC0.7□□□□□ -2.3
TNFAIP3P21580 Y_RNA.508-201ENST00000384502 114 ntBASIC0.69□□□□□ -2.3
TNFAIP3P21580 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.69□□□□□ -2.3
TNFAIP3P21580 RNU6-240P-201ENST00000516098 97 ntBASIC0.69□□□□□ -2.3
TNFAIP3P21580 SNORA25.12-201ENST00000516202 82 ntBASIC0.69□□□□□ -2.3
TNFAIP3P21580 Y_RNA.690-201ENST00000516603 95 ntBASIC0.69□□□□□ -2.3
TNFAIP3P21580 AC004812.1-201ENST00000540773 146 ntBASIC0.69□□□□□ -2.3
TNFAIP3P21580 Y_RNA.757-201ENST00000578934 114 ntBASIC0.69□□□□□ -2.3
TNFAIP3P21580 MIR3144-201ENST00000579460 79 ntBASIC0.69□□□□□ -2.3
TNFAIP3P21580 MIR4676-201ENST00000583078 72 ntBASIC0.69□□□□□ -2.3
TNFAIP3P21580 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.68□□□□□ -2.3
TNFAIP3P21580 MIR30D-201ENST00000362283 70 ntBASIC0.68□□□□□ -2.3
TNFAIP3P21580 Y_RNA.251-201ENST00000364551 99 ntBASIC0.68□□□□□ -2.3
TNFAIP3P21580 RNU6-309P-201ENST00000364573 106 ntBASIC0.68□□□□□ -2.3
TNFAIP3P21580 RNU6-42P-201ENST00000384165 107 ntBASIC0.68□□□□□ -2.3
TNFAIP3P21580 SNORA18-201ENST00000384416 132 ntBASIC0.68□□□□□ -2.3
TNFAIP3P21580 RNU6-460P-201ENST00000391158 108 ntBASIC0.68□□□□□ -2.3
TNFAIP3P21580 MIR513C-201ENST00000401352 84 ntBASIC0.68□□□□□ -2.3
TNFAIP3P21580 MIR1257-201ENST00000408490 117 ntBASIC0.68□□□□□ -2.3
TNFAIP3P21580 RNA5SP144-201ENST00000410846 116 ntBASIC0.68□□□□□ -2.3
TNFAIP3P21580 AL022718.1-201ENST00000412004 84 ntBASIC0.68□□□□□ -2.3
TNFAIP3P21580 RNU6-893P-201ENST00000458841 100 ntBASIC0.68□□□□□ -2.3
TNFAIP3P21580 RNU4-54P-201ENST00000516428 129 ntBASIC0.68□□□□□ -2.3
TNFAIP3P21580 RNU6-1258P-201ENST00000516911 111 ntBASIC0.68□□□□□ -2.3
TNFAIP3P21580 Y_RNA.120-201ENST00000363304 110 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 RNU6-342P-201ENST00000384521 104 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 MIR563-201ENST00000385080 79 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 MIR520H-201ENST00000385126 88 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 Y_RNA.580-201ENST00000391004 95 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 RNA5SP222-201ENST00000411039 105 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 RNU7-185P-201ENST00000459215 60 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 RNU7-113P-201ENST00000459273 62 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 RNU6-1223P-201ENST00000517124 104 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 AC133485.4-201ENST00000561835 220 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 AC133485.1-201ENST00000567176 124 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 AC138907.6-201ENST00000568401 126 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 AC138907.4-201ENST00000570107 226 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 MIR4804-201ENST00000581683 73 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 AC022709.1-201ENST00000615967 87 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 AL662814.1-201ENST00000617364 121 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 AC021753.1-201ENST00000635724 168 ntBASIC0.67□□□□□ -2.3
TNFAIP3P21580 Y_RNA.118-201ENST00000363300 101 ntBASIC0.66□□□□□ -2.3
TNFAIP3P21580 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
TNFAIP3P21580 MT-TF-201ENST00000387314 71 ntBASIC0.66□□□□□ -2.3
TNFAIP3P21580 SNORD93-201ENST00000408813 74 ntBASIC0.66□□□□□ -2.3
TNFAIP3P21580 MTND5P41-201ENST00000517498 206 ntBASIC0.66□□□□□ -2.3
TNFAIP3P21580 MIR4305-201ENST00000583252 102 ntBASIC0.66□□□□□ -2.3
TNFAIP3P21580 AC021443.1-201ENST00000604478 211 ntBASIC0.66□□□□□ -2.3
TNFAIP3P21580 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.66□□□□□ -2.3
TNFAIP3P21580 AC011603.4-201ENST00000611325 277 ntBASIC0.66□□□□□ -2.3
TNFAIP3P21580 Y_RNA.470-201ENST00000384307 117 ntBASIC0.65□□□□□ -2.31
TNFAIP3P21580 RNU6-364P-201ENST00000384387 107 ntBASIC0.65□□□□□ -2.31
TNFAIP3P21580 Y_RNA.555-201ENST00000384673 110 ntBASIC0.65□□□□□ -2.31
TNFAIP3P21580 MIR938-201ENST00000401216 83 ntBASIC0.65□□□□□ -2.31
TNFAIP3P21580 AL603914.1-201ENST00000401964 204 ntBASIC0.65□□□□□ -2.31
TNFAIP3P21580 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.65□□□□□ -2.31
TNFAIP3P21580 AL512326.2-201ENST00000426359 151 ntBASIC0.65□□□□□ -2.31
TNFAIP3P21580 Y_RNA.651-201ENST00000459380 103 ntBASIC0.65□□□□□ -2.31
TNFAIP3P21580 RNA5SP33-201ENST00000516687 98 ntBASIC0.65□□□□□ -2.31
TNFAIP3P21580 AC141846.1-201ENST00000568348 142 ntBASIC0.65□□□□□ -2.31
TNFAIP3P21580 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.65□□□□□ -2.31
TNFAIP3P21580 AL589743.1-201ENST00000551932 2712 ntBASIC0.65□□□□□ -2.31
TNFAIP3P21580 RNU6-915P-201ENST00000364943 103 ntBASIC0.64□□□□□ -2.31
TNFAIP3P21580 SNORA32-201ENST00000384072 121 ntBASIC0.64□□□□□ -2.31
TNFAIP3P21580 MIR125B2-201ENST00000385128 89 ntBASIC0.64□□□□□ -2.31
TNFAIP3P21580 RNU7-197P-201ENST00000458836 62 ntBASIC0.64□□□□□ -2.31
TNFAIP3P21580 RNU7-164P-201ENST00000459221 62 ntBASIC0.64□□□□□ -2.31
TNFAIP3P21580 RN7SKP12-201ENST00000516275 143 ntBASIC0.64□□□□□ -2.31
TNFAIP3P21580 RNU2-35P-201ENST00000516446 142 ntBASIC0.64□□□□□ -2.31
TNFAIP3P21580 RNU7-156P-201ENST00000517214 74 ntBASIC0.64□□□□□ -2.31
TNFAIP3P21580 MIR548X2-201ENST00000579776 100 ntBASIC0.64□□□□□ -2.31
TNFAIP3P21580 RNU6-403P-201ENST00000363163 104 ntBASIC0.63□□□□□ -2.31
TNFAIP3P21580 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
TNFAIP3P21580 Y_RNA.215-201ENST00000364204 112 ntBASIC0.63□□□□□ -2.31
TNFAIP3P21580 Y_RNA.366-201ENST00000365540 102 ntBASIC0.63□□□□□ -2.31
TNFAIP3P21580 Y_RNA.400-201ENST00000383963 111 ntBASIC0.63□□□□□ -2.31
TNFAIP3P21580 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
TNFAIP3P21580 RNU6-1086P-201ENST00000410930 100 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 919 ms