Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 RNU6-865P-201ENST00000364772 107 ntBASIC-1.16□□□□□ -2.6
CCL2P13500 MIR196A1-201ENST00000388006 70 ntBASIC-1.16□□□□□ -2.6
CCL2P13500 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
CCL2P13500 AL731563.1-201ENST00000442202 214 ntBASIC-1.16□□□□□ -2.6
CCL2P13500 HAR1A.1-201ENST00000459583 118 ntBASIC-1.16□□□□□ -2.6
CCL2P13500 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.16□□□□□ -2.6
CCL2P13500 AL606534.2-204ENST00000635008 178 ntBASIC-1.16□□□□□ -2.6
CCL2P13500 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.17□□□□□ -2.6
CCL2P13500 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.17□□□□□ -2.6
CCL2P13500 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.17□□□□□ -2.6
CCL2P13500 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
CCL2P13500 SPINT5P-201ENST00000448174 155 ntBASIC-1.17□□□□□ -2.6
CCL2P13500 RNU6-718P-201ENST00000516166 105 ntBASIC-1.17□□□□□ -2.6
CCL2P13500 RNU7-188P-201ENST00000517063 64 ntBASIC-1.17□□□□□ -2.6
CCL2P13500 AC026407.1-201ENST00000518369 204 ntBASIC-1.17□□□□□ -2.6
CCL2P13500 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.17□□□□□ -2.6
CCL2P13500 AC037487.3-201ENST00000606668 112 ntBASIC-1.17□□□□□ -2.6
CCL2P13500 AC093726.3-201ENST00000637588 150 ntBASIC-1.17□□□□□ -2.6
CCL2P13500 RNU4-10P-201ENST00000364383 140 ntBASIC-1.18□□□□□ -2.6
CCL2P13500 RNY1P2-201ENST00000364820 117 ntBASIC-1.18□□□□□ -2.6
CCL2P13500 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.18□□□□□ -2.6
CCL2P13500 SNORD116-2-201ENST00000384274 95 ntBASIC-1.18□□□□□ -2.6
CCL2P13500 SNORD116-6-201ENST00000384711 96 ntBASIC-1.18□□□□□ -2.6
CCL2P13500 SNORA53-201ENST00000391141 249 ntBASIC-1.18□□□□□ -2.6
CCL2P13500 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.18□□□□□ -2.6
CCL2P13500 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.18□□□□□ -2.6
CCL2P13500 HSPE1P25-201ENST00000455484 251 ntBASIC-1.18□□□□□ -2.6
CCL2P13500 snoU13.19-201ENST00000459148 104 ntBASIC-1.18□□□□□ -2.6
CCL2P13500 RNU6-570P-201ENST00000517051 105 ntBASIC-1.18□□□□□ -2.6
CCL2P13500 MIR376A1-201ENST00000616574 68 ntBASIC-1.18□□□□□ -2.6
CCL2P13500 uc_338.10-201ENST00000621872 182 ntBASIC-1.18□□□□□ -2.6
CCL2P13500 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.19□□□□□ -2.6
CCL2P13500 RNU4-16P-201ENST00000364737 141 ntBASIC-1.19□□□□□ -2.6
CCL2P13500 RNU1-115P-201ENST00000365329 160 ntBASIC-1.19□□□□□ -2.6
CCL2P13500 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.19□□□□□ -2.6
CCL2P13500 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.19□□□□□ -2.6
CCL2P13500 SNORA25.1-201ENST00000362326 128 ntBASIC-1.2□□□□□ -2.6
CCL2P13500 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.2□□□□□ -2.6
CCL2P13500 SNORD114-29-201ENST00000364819 70 ntBASIC-1.2□□□□□ -2.6
CCL2P13500 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.2□□□□□ -2.6
CCL2P13500 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.2□□□□□ -2.6
CCL2P13500 RNU6-30P-201ENST00000384561 107 ntBASIC-1.2□□□□□ -2.6
CCL2P13500 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.2□□□□□ -2.6
CCL2P13500 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.2□□□□□ -2.6
CCL2P13500 RNU7-13P-201ENST00000516413 62 ntBASIC-1.2□□□□□ -2.6
CCL2P13500 AC040926.1-201ENST00000530195 238 ntBASIC-1.2□□□□□ -2.6
CCL2P13500 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.21□□□□□ -2.6
CCL2P13500 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.21□□□□□ -2.6
CCL2P13500 MIR181B2-201ENST00000385004 89 ntBASIC-1.21□□□□□ -2.6
CCL2P13500 SNORD83B-201ENST00000386745 93 ntBASIC-1.21□□□□□ -2.6
CCL2P13500 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.21□□□□□ -2.6
CCL2P13500 RNU7-137P-201ENST00000516788 62 ntBASIC-1.21□□□□□ -2.6
CCL2P13500 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.21□□□□□ -2.6
CCL2P13500 MIR4473-201ENST00000583731 91 ntBASIC-1.21□□□□□ -2.6
CCL2P13500 SNORD114-10-201ENST00000363409 72 ntBASIC-1.22□□□□□ -2.6
CCL2P13500 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.22□□□□□ -2.6
CCL2P13500 RNU6-102P-201ENST00000384485 104 ntBASIC-1.22□□□□□ -2.6
CCL2P13500 MIR548F1-201ENST00000408667 84 ntBASIC-1.22□□□□□ -2.6
CCL2P13500 RNU6-130P-201ENST00000411112 103 ntBASIC-1.22□□□□□ -2.6
CCL2P13500 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.22□□□□□ -2.6
CCL2P13500 SNRPGP8-201ENST00000454064 226 ntBASIC-1.22□□□□□ -2.6
CCL2P13500 RNU7-113P-201ENST00000459273 62 ntBASIC-1.22□□□□□ -2.6
CCL2P13500 AC069439.1-201ENST00000494739 167 ntBASIC-1.22□□□□□ -2.6
CCL2P13500 AL365205.2-201ENST00000594586 68 ntBASIC-1.22□□□□□ -2.6
CCL2P13500 PART1_1.1-201ENST00000611761 217 ntBASIC-1.22□□□□□ -2.6
CCL2P13500 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.23□□□□□ -2.61
CCL2P13500 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.23□□□□□ -2.61
CCL2P13500 RNU1-141P-201ENST00000364623 158 ntBASIC-1.23□□□□□ -2.61
CCL2P13500 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.23□□□□□ -2.61
CCL2P13500 RNU6-455P-201ENST00000384681 107 ntBASIC-1.23□□□□□ -2.61
CCL2P13500 RNY4P36-201ENST00000391116 96 ntBASIC-1.23□□□□□ -2.61
CCL2P13500 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.23□□□□□ -2.61
CCL2P13500 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.23□□□□□ -2.61
CCL2P13500 MIR3920-201ENST00000581751 86 ntBASIC-1.23□□□□□ -2.61
CCL2P13500 AL008718.3-201ENST00000610217 321 ntBASIC-1.23□□□□□ -2.61
CCL2P13500 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.24□□□□□ -2.61
CCL2P13500 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.24□□□□□ -2.61
CCL2P13500 SNORA79-201ENST00000408376 140 ntBASIC-1.24□□□□□ -2.61
CCL2P13500 TRAJ51-201ENST00000504127 63 ntBASIC-1.24□□□□□ -2.61
CCL2P13500 AC021146.6-201ENST00000514659 117 ntBASIC-1.24□□□□□ -2.61
CCL2P13500 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.24□□□□□ -2.61
CCL2P13500 RNA5SP33-201ENST00000516687 98 ntBASIC-1.24□□□□□ -2.61
CCL2P13500 AC069503.3-201ENST00000618674 145 ntBASIC-1.24□□□□□ -2.61
CCL2P13500 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.25□□□□□ -2.61
CCL2P13500 RNU6-662P-201ENST00000384253 104 ntBASIC-1.25□□□□□ -2.61
CCL2P13500 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.25□□□□□ -2.61
CCL2P13500 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.25□□□□□ -2.61
CCL2P13500 AL603914.1-201ENST00000401964 204 ntBASIC-1.25□□□□□ -2.61
CCL2P13500 SNORD67.1-201ENST00000516618 108 ntBASIC-1.25□□□□□ -2.61
CCL2P13500 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.25□□□□□ -2.61
CCL2P13500 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.26□□□□□ -2.61
CCL2P13500 SNORD81.2-201ENST00000365153 76 ntBASIC-1.26□□□□□ -2.61
CCL2P13500 RNU6-290P-201ENST00000365212 101 ntBASIC-1.26□□□□□ -2.61
CCL2P13500 SNORA32-201ENST00000384072 121 ntBASIC-1.26□□□□□ -2.61
CCL2P13500 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.26□□□□□ -2.61
CCL2P13500 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.26□□□□□ -2.61
CCL2P13500 MIR204-201ENST00000385200 110 ntBASIC-1.26□□□□□ -2.61
CCL2P13500 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.26□□□□□ -2.61
CCL2P13500 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.26□□□□□ -2.61
CCL2P13500 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms