Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 RNU6-716P-201ENST00000365621 103 ntBASIC0.3□□□□□ -2.36
GGPS1O95749 RNU6-949P-201ENST00000384040 107 ntBASIC0.3□□□□□ -2.36
GGPS1O95749 Y_RNA.515-201ENST00000384535 112 ntBASIC0.3□□□□□ -2.36
GGPS1O95749 Y_RNA.556-201ENST00000384677 113 ntBASIC0.3□□□□□ -2.36
GGPS1O95749 Y_RNA.567-201ENST00000384736 106 ntBASIC0.3□□□□□ -2.36
GGPS1O95749 Y_RNA.588-201ENST00000391254 102 ntBASIC0.3□□□□□ -2.36
GGPS1O95749 SNORD58.1-201ENST00000391313 66 ntBASIC0.3□□□□□ -2.36
GGPS1O95749 MIR1197-201ENST00000408818 88 ntBASIC0.3□□□□□ -2.36
GGPS1O95749 Y_RNA.617-201ENST00000410920 90 ntBASIC0.3□□□□□ -2.36
GGPS1O95749 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
GGPS1O95749 RNU6-469P-201ENST00000516253 101 ntBASIC0.3□□□□□ -2.36
GGPS1O95749 RNU6-765P-201ENST00000516916 99 ntBASIC0.3□□□□□ -2.36
GGPS1O95749 AC096949.1-201ENST00000412047 152 ntBASIC0.29□□□□□ -2.36
GGPS1O95749 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
GGPS1O95749 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.29□□□□□ -2.36
GGPS1O95749 SNORD27-201ENST00000363981 72 ntBASIC0.28□□□□□ -2.36
GGPS1O95749 SNORA18-201ENST00000384416 132 ntBASIC0.28□□□□□ -2.36
GGPS1O95749 RNU6-1011P-201ENST00000384668 107 ntBASIC0.28□□□□□ -2.36
GGPS1O95749 Y_RNA.571-201ENST00000384753 98 ntBASIC0.28□□□□□ -2.36
GGPS1O95749 RNU5E-9P-201ENST00000411164 104 ntBASIC0.28□□□□□ -2.36
GGPS1O95749 SNRPGP12-201ENST00000449481 213 ntBASIC0.28□□□□□ -2.36
GGPS1O95749 MIR4308-201ENST00000580634 81 ntBASIC0.28□□□□□ -2.36
GGPS1O95749 MIR4491-201ENST00000581087 68 ntBASIC0.28□□□□□ -2.36
GGPS1O95749 Y_RNA.20-201ENST00000362479 113 ntBASIC0.27□□□□□ -2.37
GGPS1O95749 RNA5SP457-201ENST00000363657 124 ntBASIC0.27□□□□□ -2.37
GGPS1O95749 Y_RNA.182-201ENST00000363880 111 ntBASIC0.27□□□□□ -2.37
GGPS1O95749 RNU4-16P-201ENST00000364737 141 ntBASIC0.27□□□□□ -2.37
GGPS1O95749 RNU6-923P-201ENST00000364753 107 ntBASIC0.27□□□□□ -2.37
GGPS1O95749 MTND2P23-201ENST00000422990 651 ntBASIC0.27□□□□□ -2.37
GGPS1O95749 AL512326.2-201ENST00000426359 151 ntBASIC0.27□□□□□ -2.37
GGPS1O95749 MTCYBP9-201ENST00000431021 303 ntBASIC0.27□□□□□ -2.37
GGPS1O95749 SNORA36.1-201ENST00000363424 132 ntBASIC0.26□□□□□ -2.37
GGPS1O95749 Y_RNA.174-201ENST00000363781 105 ntBASIC0.26□□□□□ -2.37
GGPS1O95749 SNORA25.7-201ENST00000364375 127 ntBASIC0.26□□□□□ -2.37
GGPS1O95749 RNU6-275P-201ENST00000364910 107 ntBASIC0.26□□□□□ -2.37
GGPS1O95749 RNU4-70P-201ENST00000384579 139 ntBASIC0.26□□□□□ -2.37
GGPS1O95749 Y_RNA.539-201ENST00000384635 107 ntBASIC0.26□□□□□ -2.37
GGPS1O95749 MIR644A-201ENST00000385262 94 ntBASIC0.26□□□□□ -2.37
GGPS1O95749 RNU6-1086P-201ENST00000410930 100 ntBASIC0.26□□□□□ -2.37
GGPS1O95749 Y_RNA.626-201ENST00000411288 95 ntBASIC0.26□□□□□ -2.37
GGPS1O95749 RNU6-863P-201ENST00000515989 104 ntBASIC0.26□□□□□ -2.37
GGPS1O95749 Y_RNA.668-201ENST00000516233 93 ntBASIC0.26□□□□□ -2.37
GGPS1O95749 AL360085.1-201ENST00000604713 532 ntBASIC0.26□□□□□ -2.37
GGPS1O95749 AL109933.3-201ENST00000619095 188 ntBASIC0.26□□□□□ -2.37
GGPS1O95749 AC078938.1-201ENST00000620993 318 ntBASIC0.26□□□□□ -2.37
GGPS1O95749 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.26□□□□□ -2.37
GGPS1O95749 Y_RNA.65-201ENST00000362846 100 ntBASIC0.25□□□□□ -2.37
GGPS1O95749 RNY1P13-201ENST00000365030 105 ntBASIC0.25□□□□□ -2.37
GGPS1O95749 RNY1P6-201ENST00000384193 109 ntBASIC0.25□□□□□ -2.37
GGPS1O95749 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
GGPS1O95749 Y_RNA.757-201ENST00000578934 114 ntBASIC0.25□□□□□ -2.37
GGPS1O95749 AC023932.2-201ENST00000603176 175 ntBASIC0.25□□□□□ -2.37
GGPS1O95749 MTND5P32-201ENST00000560711 1802 ntBASIC0.24□□□□□ -2.37
GGPS1O95749 Y_RNA.32-201ENST00000362589 110 ntBASIC0.24□□□□□ -2.37
GGPS1O95749 RNA5SP62-201ENST00000363457 110 ntBASIC0.24□□□□□ -2.37
GGPS1O95749 RNU4-67P-201ENST00000364569 141 ntBASIC0.24□□□□□ -2.37
GGPS1O95749 Y_RNA.478-201ENST00000384358 107 ntBASIC0.24□□□□□ -2.37
GGPS1O95749 SNORA72.6-201ENST00000384520 129 ntBASIC0.24□□□□□ -2.37
GGPS1O95749 MIR1302-3-201ENST00000408128 138 ntBASIC0.24□□□□□ -2.37
GGPS1O95749 RNU6-135P-201ENST00000516769 101 ntBASIC0.24□□□□□ -2.37
GGPS1O95749 MRPS18CP4-201ENST00000535821 231 ntBASIC0.24□□□□□ -2.37
GGPS1O95749 Y_RNA.133-201ENST00000363428 110 ntBASIC0.23□□□□□ -2.37
GGPS1O95749 Y_RNA.350-201ENST00000365409 98 ntBASIC0.23□□□□□ -2.37
GGPS1O95749 SNORA31.14-201ENST00000516728 116 ntBASIC0.23□□□□□ -2.37
GGPS1O95749 RNU6-1258P-201ENST00000516911 111 ntBASIC0.23□□□□□ -2.37
GGPS1O95749 MIR4431-201ENST00000579990 94 ntBASIC0.23□□□□□ -2.37
GGPS1O95749 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
GGPS1O95749 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
GGPS1O95749 MIR2909-201ENST00000617113 69 ntBASIC0.23□□□□□ -2.37
GGPS1O95749 Y_RNA.75-201ENST00000362927 97 ntBASIC0.22□□□□□ -2.37
GGPS1O95749 Y_RNA.477-201ENST00000384352 108 ntBASIC0.22□□□□□ -2.37
GGPS1O95749 MIR568-201ENST00000385036 95 ntBASIC0.22□□□□□ -2.37
GGPS1O95749 RNA5SP144-201ENST00000410846 116 ntBASIC0.22□□□□□ -2.37
GGPS1O95749 RNU4-71P-201ENST00000516258 113 ntBASIC0.22□□□□□ -2.37
GGPS1O95749 MIR6718-201ENST00000616153 80 ntBASIC0.22□□□□□ -2.37
GGPS1O95749 RNU6-1099P-201ENST00000363533 107 ntBASIC0.21□□□□□ -2.38
GGPS1O95749 Y_RNA.412-201ENST00000384001 104 ntBASIC0.21□□□□□ -2.38
GGPS1O95749 Y_RNA.536-201ENST00000384621 113 ntBASIC0.21□□□□□ -2.38
GGPS1O95749 RNU6-291P-201ENST00000384720 107 ntBASIC0.21□□□□□ -2.38
GGPS1O95749 RNA5SP268-201ENST00000516828 124 ntBASIC0.21□□□□□ -2.38
GGPS1O95749 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.21□□□□□ -2.38
GGPS1O95749 Y_RNA.30-201ENST00000362572 97 ntBASIC0.2□□□□□ -2.38
GGPS1O95749 Y_RNA.171-201ENST00000363760 102 ntBASIC0.2□□□□□ -2.38
GGPS1O95749 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
GGPS1O95749 RNU2-59P-201ENST00000410482 191 ntBASIC0.2□□□□□ -2.38
GGPS1O95749 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.2□□□□□ -2.38
GGPS1O95749 RNU6-327P-201ENST00000516270 127 ntBASIC0.2□□□□□ -2.38
GGPS1O95749 Y_RNA.697-201ENST00000516776 113 ntBASIC0.2□□□□□ -2.38
GGPS1O95749 U6.106-201ENST00000636360 105 ntBASIC0.2□□□□□ -2.38
GGPS1O95749 RNU6-349P-201ENST00000362402 107 ntBASIC0.19□□□□□ -2.38
GGPS1O95749 Y_RNA.52-201ENST00000362760 96 ntBASIC0.19□□□□□ -2.38
GGPS1O95749 Y_RNA.521-201ENST00000384560 114 ntBASIC0.19□□□□□ -2.38
GGPS1O95749 RNU7-79P-201ENST00000516082 62 ntBASIC0.19□□□□□ -2.38
GGPS1O95749 SNORA25.16-201ENST00000516741 121 ntBASIC0.19□□□□□ -2.38
GGPS1O95749 RNU7-35P-201ENST00000517174 62 ntBASIC0.19□□□□□ -2.38
GGPS1O95749 MTND5P34-201ENST00000568888 325 ntBASIC0.19□□□□□ -2.38
GGPS1O95749 AC062037.2-201ENST00000610137 73 ntBASIC0.19□□□□□ -2.38
GGPS1O95749 MIR6828-201ENST00000636181 60 ntBASIC0.19□□□□□ -2.38
GGPS1O95749 RNU6-694P-201ENST00000364071 147 ntBASIC0.18□□□□□ -2.38
GGPS1O95749 RNU6-1229P-201ENST00000364295 107 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 254.5 ms