Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 RNA5SP63-201ENST00000391225 112 ntBASIC0.26□□□□□ -2.37
CREB3O43889 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
CREB3O43889 MIR2909-201ENST00000617113 69 ntBASIC0.26□□□□□ -2.37
CREB3O43889 Y_RNA.68-201ENST00000362881 102 ntBASIC0.25□□□□□ -2.37
CREB3O43889 RNU6-1229P-201ENST00000364295 107 ntBASIC0.25□□□□□ -2.37
CREB3O43889 MTND1P19-201ENST00000511780 315 ntBASIC0.25□□□□□ -2.37
CREB3O43889 AL117187.1-201ENST00000555482 181 ntBASIC0.25□□□□□ -2.37
CREB3O43889 Y_RNA.326-201ENST00000365176 113 ntBASIC0.24□□□□□ -2.37
CREB3O43889 SNORA18-201ENST00000384416 132 ntBASIC0.24□□□□□ -2.37
CREB3O43889 MIR606-201ENST00000384851 96 ntBASIC0.24□□□□□ -2.37
CREB3O43889 Y_RNA.617-201ENST00000410920 90 ntBASIC0.24□□□□□ -2.37
CREB3O43889 SNORA25.7-201ENST00000364375 127 ntBASIC0.23□□□□□ -2.37
CREB3O43889 Y_RNA.308-201ENST00000365043 101 ntBASIC0.23□□□□□ -2.37
CREB3O43889 Y_RNA.396-201ENST00000383949 103 ntBASIC0.23□□□□□ -2.37
CREB3O43889 RNU4-70P-201ENST00000384579 139 ntBASIC0.23□□□□□ -2.37
CREB3O43889 Y_RNA.588-201ENST00000391254 102 ntBASIC0.23□□□□□ -2.37
CREB3O43889 RNU2-59P-201ENST00000410482 191 ntBASIC0.23□□□□□ -2.37
CREB3O43889 RNU6-1086P-201ENST00000410930 100 ntBASIC0.23□□□□□ -2.37
CREB3O43889 AC073261.1-201ENST00000429409 121 ntBASIC0.23□□□□□ -2.37
CREB3O43889 RNU6-1149P-201ENST00000516810 97 ntBASIC0.23□□□□□ -2.37
CREB3O43889 MIR4643-201ENST00000577473 78 ntBASIC0.23□□□□□ -2.37
CREB3O43889 MIR4491-201ENST00000581087 68 ntBASIC0.23□□□□□ -2.37
CREB3O43889 AC011921.3-201ENST00000605540 361 ntBASIC0.23□□□□□ -2.37
CREB3O43889 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
CREB3O43889 Y_RNA.76-201ENST00000362931 109 ntBASIC0.22□□□□□ -2.37
CREB3O43889 RNU6-643P-201ENST00000384018 107 ntBASIC0.22□□□□□ -2.37
CREB3O43889 Y_RNA.812-201ENST00000610788 101 ntBASIC0.22□□□□□ -2.37
CREB3O43889 Y_RNA.784-201ENST00000613803 101 ntBASIC0.22□□□□□ -2.37
CREB3O43889 Y_RNA.787-201ENST00000616522 101 ntBASIC0.22□□□□□ -2.37
CREB3O43889 Y_RNA.780-201ENST00000617336 101 ntBASIC0.22□□□□□ -2.37
CREB3O43889 Y_RNA.801-201ENST00000619005 101 ntBASIC0.22□□□□□ -2.37
CREB3O43889 MIR4315-1-201ENST00000636800 73 ntBASIC0.22□□□□□ -2.37
CREB3O43889 MIR4315-2-201ENST00000640925 73 ntBASIC0.22□□□□□ -2.37
CREB3O43889 MIR644A-201ENST00000385262 94 ntBASIC0.21□□□□□ -2.38
CREB3O43889 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.21□□□□□ -2.38
CREB3O43889 RNA5SP268-201ENST00000516828 124 ntBASIC0.21□□□□□ -2.38
CREB3O43889 SCARNA15-202ENST00000516881 127 ntBASIC0.21□□□□□ -2.38
CREB3O43889 AC112693.2-201ENST00000556538 232 ntBASIC0.21□□□□□ -2.38
CREB3O43889 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.21□□□□□ -2.38
CREB3O43889 MIR4431-201ENST00000579990 94 ntBASIC0.21□□□□□ -2.38
CREB3O43889 AC008737.2-201ENST00000599446 118 ntBASIC0.21□□□□□ -2.38
CREB3O43889 RNU2-4P-201ENST00000606190 192 ntBASIC0.21□□□□□ -2.38
CREB3O43889 AC078938.1-201ENST00000620993 318 ntBASIC0.21□□□□□ -2.38
CREB3O43889 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.21□□□□□ -2.38
CREB3O43889 Y_RNA.280-201ENST00000364765 112 ntBASIC0.2□□□□□ -2.38
CREB3O43889 Y_RNA.556-201ENST00000384677 113 ntBASIC0.2□□□□□ -2.38
CREB3O43889 RNU2-38P-201ENST00000410856 79 ntBASIC0.2□□□□□ -2.38
CREB3O43889 Y_RNA.697-201ENST00000516776 113 ntBASIC0.2□□□□□ -2.38
CREB3O43889 Y_RNA.47-201ENST00000362697 108 ntBASIC0.19□□□□□ -2.38
CREB3O43889 SNORA36.1-201ENST00000363424 132 ntBASIC0.19□□□□□ -2.38
CREB3O43889 RNU4-16P-201ENST00000364737 141 ntBASIC0.19□□□□□ -2.38
CREB3O43889 RNY1P6-201ENST00000384193 109 ntBASIC0.19□□□□□ -2.38
CREB3O43889 Y_RNA.536-201ENST00000384621 113 ntBASIC0.19□□□□□ -2.38
CREB3O43889 RNU6-493P-201ENST00000391321 108 ntBASIC0.19□□□□□ -2.38
CREB3O43889 SNORD127-201ENST00000458892 86 ntBASIC0.19□□□□□ -2.38
CREB3O43889 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.19□□□□□ -2.38
CREB3O43889 Y_RNA.32-201ENST00000362589 110 ntBASIC0.18□□□□□ -2.38
CREB3O43889 RNY4P28-201ENST00000365281 93 ntBASIC0.18□□□□□ -2.38
CREB3O43889 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
CREB3O43889 AC069113.3-201ENST00000521019 150 ntBASIC0.18□□□□□ -2.38
CREB3O43889 MIR6718-201ENST00000616153 80 ntBASIC0.18□□□□□ -2.38
CREB3O43889 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.17□□□□□ -2.38
CREB3O43889 RNU6-535P-201ENST00000384722 107 ntBASIC0.17□□□□□ -2.38
CREB3O43889 RNU6-1194P-201ENST00000516208 104 ntBASIC0.17□□□□□ -2.38
CREB3O43889 SNORA31.14-201ENST00000516728 116 ntBASIC0.17□□□□□ -2.38
CREB3O43889 SCARNA16.5-201ENST00000517114 183 ntBASIC0.17□□□□□ -2.38
CREB3O43889 Y_RNA.178-201ENST00000363832 102 ntBASIC0.16□□□□□ -2.38
CREB3O43889 Y_RNA.182-201ENST00000363880 111 ntBASIC0.16□□□□□ -2.38
CREB3O43889 RNY1P13-201ENST00000365030 105 ntBASIC0.16□□□□□ -2.38
CREB3O43889 Y_RNA.412-201ENST00000384001 104 ntBASIC0.16□□□□□ -2.38
CREB3O43889 Y_RNA.459-201ENST00000384251 102 ntBASIC0.16□□□□□ -2.38
CREB3O43889 Y_RNA.476-201ENST00000384347 108 ntBASIC0.16□□□□□ -2.38
CREB3O43889 Y_RNA.539-201ENST00000384635 107 ntBASIC0.16□□□□□ -2.38
CREB3O43889 Y_RNA.571-201ENST00000384753 98 ntBASIC0.16□□□□□ -2.38
CREB3O43889 MIR1302-3-201ENST00000408128 138 ntBASIC0.16□□□□□ -2.38
CREB3O43889 RNA5SP227-201ENST00000516184 113 ntBASIC0.16□□□□□ -2.38
CREB3O43889 Y_RNA.757-201ENST00000578934 114 ntBASIC0.16□□□□□ -2.38
CREB3O43889 MIR4639-201ENST00000584938 69 ntBASIC0.16□□□□□ -2.38
CREB3O43889 AC091304.10-201ENST00000641554 121 ntBASIC0.16□□□□□ -2.38
CREB3O43889 Y_RNA.562-201ENST00000384695 113 ntBASIC0.15□□□□□ -2.39
CREB3O43889 AL022718.1-201ENST00000412004 84 ntBASIC0.15□□□□□ -2.39
CREB3O43889 RNY3P16-201ENST00000516338 101 ntBASIC0.15□□□□□ -2.39
CREB3O43889 RNU6-275P-201ENST00000364910 107 ntBASIC0.14□□□□□ -2.39
CREB3O43889 Y_RNA.433-201ENST00000384089 102 ntBASIC0.14□□□□□ -2.39
CREB3O43889 RNU6-291P-201ENST00000384720 107 ntBASIC0.14□□□□□ -2.39
CREB3O43889 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
CREB3O43889 DEFB131E-201ENST00000532329 154 ntBASIC0.14□□□□□ -2.39
CREB3O43889 MIR6828-201ENST00000636181 60 ntBASIC0.14□□□□□ -2.39
CREB3O43889 RNU4-58P-201ENST00000363192 141 ntBASIC0.13□□□□□ -2.39
CREB3O43889 SNORD27-201ENST00000363981 72 ntBASIC0.13□□□□□ -2.39
CREB3O43889 Y_RNA.478-201ENST00000384358 107 ntBASIC0.13□□□□□ -2.39
CREB3O43889 Y_RNA.521-201ENST00000384560 114 ntBASIC0.13□□□□□ -2.39
CREB3O43889 AC096949.1-201ENST00000412047 152 ntBASIC0.13□□□□□ -2.39
CREB3O43889 RNU7-113P-201ENST00000459273 62 ntBASIC0.13□□□□□ -2.39
CREB3O43889 RNU7-79P-201ENST00000516082 62 ntBASIC0.13□□□□□ -2.39
CREB3O43889 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
CREB3O43889 MTND5P32-201ENST00000560711 1802 ntBASIC0.13□□□□□ -2.39
CREB3O43889 SNORA9.1-201ENST00000362412 131 ntBASIC0.12□□□□□ -2.39
CREB3O43889 RNU6-815P-201ENST00000384080 113 ntBASIC0.12□□□□□ -2.39
CREB3O43889 MIRLET7F2-201ENST00000385277 83 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms