Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.03□□□□□ -2.57
TRAV3A0A0B4J244 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.04□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.04□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.04□□□□□ -2.58
TRAV3A0A0B4J244 RNU4-70P-201ENST00000384579 139 ntBASIC-1.04□□□□□ -2.58
TRAV3A0A0B4J244 SNX3P1X-201ENST00000414887 175 ntBASIC-1.04□□□□□ -2.58
TRAV3A0A0B4J244 PMCHL1-202ENST00000423102 261 ntBASIC-1.04□□□□□ -2.58
TRAV3A0A0B4J244 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.04□□□□□ -2.58
TRAV3A0A0B4J244 RNU7-13P-201ENST00000516413 62 ntBASIC-1.04□□□□□ -2.58
TRAV3A0A0B4J244 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.04□□□□□ -2.58
TRAV3A0A0B4J244 MIR4473-201ENST00000583731 91 ntBASIC-1.04□□□□□ -2.58
TRAV3A0A0B4J244 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.04□□□□□ -2.58
TRAV3A0A0B4J244 AL365205.2-201ENST00000594586 68 ntBASIC-1.04□□□□□ -2.58
TRAV3A0A0B4J244 MIR6851-201ENST00000617060 67 ntBASIC-1.04□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.05□□□□□ -2.58
TRAV3A0A0B4J244 RNU4-36P-201ENST00000364294 144 ntBASIC-1.05□□□□□ -2.58
TRAV3A0A0B4J244 SNORD56B-201ENST00000384713 71 ntBASIC-1.05□□□□□ -2.58
TRAV3A0A0B4J244 SNORA53-201ENST00000391141 249 ntBASIC-1.05□□□□□ -2.58
TRAV3A0A0B4J244 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.05□□□□□ -2.58
TRAV3A0A0B4J244 AC096644.2-201ENST00000429278 159 ntBASIC-1.05□□□□□ -2.58
TRAV3A0A0B4J244 MRPS35P2-201ENST00000508242 191 ntBASIC-1.05□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.05□□□□□ -2.58
TRAV3A0A0B4J244 RNU6-881P-201ENST00000516813 102 ntBASIC-1.05□□□□□ -2.58
TRAV3A0A0B4J244 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
TRAV3A0A0B4J244 AC024909.2-201ENST00000553035 286 ntBASIC-1.05□□□□□ -2.58
TRAV3A0A0B4J244 MIR5690-201ENST00000583739 73 ntBASIC-1.05□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.05□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.06□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.06□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.06□□□□□ -2.58
TRAV3A0A0B4J244 MIR204-201ENST00000385200 110 ntBASIC-1.06□□□□□ -2.58
TRAV3A0A0B4J244 MIR548I2-201ENST00000408348 149 ntBASIC-1.06□□□□□ -2.58
TRAV3A0A0B4J244 SPINT5P-201ENST00000448174 155 ntBASIC-1.06□□□□□ -2.58
TRAV3A0A0B4J244 SNRPGP8-201ENST00000454064 226 ntBASIC-1.06□□□□□ -2.58
TRAV3A0A0B4J244 U8.20-201ENST00000459445 131 ntBASIC-1.06□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.06□□□□□ -2.58
TRAV3A0A0B4J244 AL008718.3-201ENST00000610217 321 ntBASIC-1.06□□□□□ -2.58
TRAV3A0A0B4J244 RNU6-502P-201ENST00000362419 108 ntBASIC-1.07□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.07□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.07□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.07□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.07□□□□□ -2.58
TRAV3A0A0B4J244 MIR617-201ENST00000385030 97 ntBASIC-1.07□□□□□ -2.58
TRAV3A0A0B4J244 MIR519E-201ENST00000385075 84 ntBASIC-1.07□□□□□ -2.58
TRAV3A0A0B4J244 MTND1P29-201ENST00000448112 647 ntBASIC-1.07□□□□□ -2.58
TRAV3A0A0B4J244 SNORD67.1-201ENST00000516618 108 ntBASIC-1.07□□□□□ -2.58
TRAV3A0A0B4J244 YWHAEP2-201ENST00000580066 112 ntBASIC-1.07□□□□□ -2.58
TRAV3A0A0B4J244 MIR548AG2-201ENST00000581228 64 ntBASIC-1.07□□□□□ -2.58
TRAV3A0A0B4J244 MIR548AE1-201ENST00000583292 70 ntBASIC-1.07□□□□□ -2.58
TRAV3A0A0B4J244 AL359881.1-201ENST00000602916 267 ntBASIC-1.07□□□□□ -2.58
TRAV3A0A0B4J244 MIR4320-201ENST00000636981 65 ntBASIC-1.07□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.08□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.08□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.08□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.08□□□□□ -2.58
TRAV3A0A0B4J244 SCARNA15-202ENST00000516881 127 ntBASIC-1.08□□□□□ -2.58
TRAV3A0A0B4J244 MIR3129-201ENST00000581095 76 ntBASIC-1.08□□□□□ -2.58
TRAV3A0A0B4J244 AC011603.4-201ENST00000611325 277 ntBASIC-1.08□□□□□ -2.58
TRAV3A0A0B4J244 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.09□□□□□ -2.58
TRAV3A0A0B4J244 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.09□□□□□ -2.58
TRAV3A0A0B4J244 SNORD83B-201ENST00000386745 93 ntBASIC-1.09□□□□□ -2.58
TRAV3A0A0B4J244 RNA5SP144-201ENST00000410846 116 ntBASIC-1.09□□□□□ -2.58
TRAV3A0A0B4J244 RNU6-370P-201ENST00000411008 104 ntBASIC-1.09□□□□□ -2.58
TRAV3A0A0B4J244 RNU7-55P-201ENST00000459426 62 ntBASIC-1.09□□□□□ -2.58
TRAV3A0A0B4J244 SNORA40.14-201ENST00000516543 86 ntBASIC-1.09□□□□□ -2.58
TRAV3A0A0B4J244 RNU6-358P-201ENST00000516564 75 ntBASIC-1.09□□□□□ -2.58
TRAV3A0A0B4J244 MIR3688-2-201ENST00000636963 87 ntBASIC-1.09□□□□□ -2.58
TRAV3A0A0B4J244 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.1□□□□□ -2.59
TRAV3A0A0B4J244 RNU6-154P-201ENST00000384306 106 ntBASIC-1.1□□□□□ -2.59
TRAV3A0A0B4J244 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
TRAV3A0A0B4J244 HSPE1P25-201ENST00000455484 251 ntBASIC-1.1□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.1□□□□□ -2.59
TRAV3A0A0B4J244 AC133104.2-201ENST00000615272 193 ntBASIC-1.1□□□□□ -2.59
TRAV3A0A0B4J244 AL138825.1-201ENST00000618587 192 ntBASIC-1.1□□□□□ -2.59
TRAV3A0A0B4J244 MIR20A-201ENST00000362279 71 ntBASIC-1.11□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.11□□□□□ -2.59
TRAV3A0A0B4J244 SNORD115-44-201ENST00000365391 82 ntBASIC-1.11□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.11□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.11□□□□□ -2.59
TRAV3A0A0B4J244 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.11□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.11□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.11□□□□□ -2.59
TRAV3A0A0B4J244 RNU6-570P-201ENST00000517051 105 ntBASIC-1.11□□□□□ -2.59
TRAV3A0A0B4J244 RNU6-699P-201ENST00000517081 110 ntBASIC-1.11□□□□□ -2.59
TRAV3A0A0B4J244 RPS29P30-201ENST00000600975 111 ntBASIC-1.11□□□□□ -2.59
TRAV3A0A0B4J244 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.11□□□□□ -2.59
TRAV3A0A0B4J244 RNU4-10P-201ENST00000364383 140 ntBASIC-1.12□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.12□□□□□ -2.59
TRAV3A0A0B4J244 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.12□□□□□ -2.59
TRAV3A0A0B4J244 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.12□□□□□ -2.59
TRAV3A0A0B4J244 AC244090.1-201ENST00000441884 93 ntBASIC-1.12□□□□□ -2.59
TRAV3A0A0B4J244 AL731563.1-201ENST00000442202 214 ntBASIC-1.12□□□□□ -2.59
TRAV3A0A0B4J244 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.12□□□□□ -2.59
TRAV3A0A0B4J244 RNU6-507P-201ENST00000516045 100 ntBASIC-1.12□□□□□ -2.59
TRAV3A0A0B4J244 RNU7-30P-201ENST00000516835 62 ntBASIC-1.12□□□□□ -2.59
TRAV3A0A0B4J244 RNU7-70P-201ENST00000516941 66 ntBASIC-1.12□□□□□ -2.59
TRAV3A0A0B4J244 AC245505.1-201ENST00000556398 224 ntBASIC-1.12□□□□□ -2.59
TRAV3A0A0B4J244 MIR3908-201ENST00000579798 126 ntBASIC-1.12□□□□□ -2.59
TRAV3A0A0B4J244 AC006006.1-201ENST00000603082 144 ntBASIC-1.12□□□□□ -2.59
TRAV3A0A0B4J244 PART1_1.1-201ENST00000611761 217 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms