Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 RNU7-43P-201ENST00000516554 64 ntBASIC2.2□□□□□ -2.06
PCDHA11Q9Y5I1 RNU6-521P-201ENST00000516663 105 ntBASIC2.2□□□□□ -2.06
PCDHA11Q9Y5I1 SNORA31.17-201ENST00000516953 127 ntBASIC2.2□□□□□ -2.06
PCDHA11Q9Y5I1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.2□□□□□ -2.06
PCDHA11Q9Y5I1 MIR8055-201ENST00000610739 97 ntBASIC2.2□□□□□ -2.06
PCDHA11Q9Y5I1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.2□□□□□ -2.06
PCDHA11Q9Y5I1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PCDHA11Q9Y5I1 RNU6-1123P-201ENST00000362347 106 ntBASIC2.19□□□□□ -2.06
PCDHA11Q9Y5I1 SNORD45B-201ENST00000364617 72 ntBASIC2.19□□□□□ -2.06
PCDHA11Q9Y5I1 SNORA1.1-201ENST00000364671 133 ntBASIC2.19□□□□□ -2.06
PCDHA11Q9Y5I1 Y_RNA.355-201ENST00000365462 98 ntBASIC2.19□□□□□ -2.06
PCDHA11Q9Y5I1 SNORA18-201ENST00000384416 132 ntBASIC2.19□□□□□ -2.06
PCDHA11Q9Y5I1 MIR499A-201ENST00000384903 122 ntBASIC2.19□□□□□ -2.06
PCDHA11Q9Y5I1 RNU6-644P-201ENST00000391155 98 ntBASIC2.19□□□□□ -2.06
PCDHA11Q9Y5I1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.19□□□□□ -2.06
PCDHA11Q9Y5I1 RN7SKP12-201ENST00000516275 143 ntBASIC2.19□□□□□ -2.06
PCDHA11Q9Y5I1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCDHA11Q9Y5I1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PCDHA11Q9Y5I1 RNU6-1313P-201ENST00000362622 102 ntBASIC2.18□□□□□ -2.06
PCDHA11Q9Y5I1 RNY1P10-201ENST00000363268 113 ntBASIC2.18□□□□□ -2.06
PCDHA11Q9Y5I1 RNU6-1134P-201ENST00000365156 101 ntBASIC2.18□□□□□ -2.06
PCDHA11Q9Y5I1 RNA5SP37-201ENST00000365420 130 ntBASIC2.18□□□□□ -2.06
PCDHA11Q9Y5I1 RNU6-820P-201ENST00000384273 107 ntBASIC2.18□□□□□ -2.06
PCDHA11Q9Y5I1 RNU6-917P-201ENST00000516294 104 ntBASIC2.18□□□□□ -2.06
PCDHA11Q9Y5I1 AC121758.2-201ENST00000553271 193 ntBASIC2.18□□□□□ -2.06
PCDHA11Q9Y5I1 MIR4287-201ENST00000579398 78 ntBASIC2.18□□□□□ -2.06
PCDHA11Q9Y5I1 MIR548Z-201ENST00000584743 97 ntBASIC2.18□□□□□ -2.06
PCDHA11Q9Y5I1 MIR8070-201ENST00000616510 88 ntBASIC2.18□□□□□ -2.06
PCDHA11Q9Y5I1 AC008133.2-201ENST00000624540 351 ntBASIC2.18□□□□□ -2.06
PCDHA11Q9Y5I1 RNU6-60P-201ENST00000364792 103 ntBASIC2.17□□□□□ -2.06
PCDHA11Q9Y5I1 SNORA6-201ENST00000384033 151 ntBASIC2.17□□□□□ -2.06
PCDHA11Q9Y5I1 BTF3P4-201ENST00000418852 495 ntBASIC2.17□□□□□ -2.06
PCDHA11Q9Y5I1 AC244636.1-201ENST00000421152 228 ntBASIC2.17□□□□□ -2.06
PCDHA11Q9Y5I1 AL445685.2-201ENST00000422551 342 ntBASIC2.17□□□□□ -2.06
PCDHA11Q9Y5I1 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
PCDHA11Q9Y5I1 RNA5SP445-201ENST00000515889 115 ntBASIC2.17□□□□□ -2.06
PCDHA11Q9Y5I1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.17□□□□□ -2.06
PCDHA11Q9Y5I1 MIR4777-201ENST00000583710 86 ntBASIC2.17□□□□□ -2.06
PCDHA11Q9Y5I1 Z97988.1-201ENST00000637697 135 ntBASIC2.17□□□□□ -2.06
PCDHA11Q9Y5I1 AC091304.10-201ENST00000641554 121 ntBASIC2.17□□□□□ -2.06
PCDHA11Q9Y5I1 Y_RNA.96-201ENST00000363092 109 ntBASIC2.16□□□□□ -2.06
PCDHA11Q9Y5I1 RNA5SP173-201ENST00000364857 136 ntBASIC2.16□□□□□ -2.06
PCDHA11Q9Y5I1 MIR17-201ENST00000385012 84 ntBASIC2.16□□□□□ -2.06
PCDHA11Q9Y5I1 MIR4764-201ENST00000580680 88 ntBASIC2.16□□□□□ -2.06
PCDHA11Q9Y5I1 U7.3-201ENST00000616123 62 ntBASIC2.16□□□□□ -2.06
PCDHA11Q9Y5I1 MIR8065-201ENST00000620577 100 ntBASIC2.16□□□□□ -2.06
PCDHA11Q9Y5I1 Y_RNA.95-201ENST00000363079 95 ntBASIC2.15□□□□□ -2.07
PCDHA11Q9Y5I1 SNORD115-35-201ENST00000365122 82 ntBASIC2.15□□□□□ -2.07
PCDHA11Q9Y5I1 RNA5SP190-201ENST00000365222 118 ntBASIC2.15□□□□□ -2.07
PCDHA11Q9Y5I1 Y_RNA.354-201ENST00000365448 111 ntBASIC2.15□□□□□ -2.07
PCDHA11Q9Y5I1 RNU6-203P-201ENST00000384038 104 ntBASIC2.15□□□□□ -2.07
PCDHA11Q9Y5I1 RNU6-342P-201ENST00000384521 104 ntBASIC2.15□□□□□ -2.07
PCDHA11Q9Y5I1 MRPL35P3-201ENST00000421557 364 ntBASIC2.15□□□□□ -2.07
PCDHA11Q9Y5I1 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
PCDHA11Q9Y5I1 Y_RNA.659-201ENST00000515994 113 ntBASIC2.15□□□□□ -2.07
PCDHA11Q9Y5I1 AC022254.1-201ENST00000567857 235 ntBASIC2.15□□□□□ -2.07
PCDHA11Q9Y5I1 MIR5694-201ENST00000581190 76 ntBASIC2.15□□□□□ -2.07
PCDHA11Q9Y5I1 AL359821.1-201ENST00000605519 182 ntBASIC2.15□□□□□ -2.07
PCDHA11Q9Y5I1 AL512310.12-203ENST00000640543 90 ntBASIC2.15□□□□□ -2.07
PCDHA11Q9Y5I1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHA11Q9Y5I1 MIR194-1-201ENST00000384892 85 ntBASIC2.14□□□□□ -2.07
PCDHA11Q9Y5I1 Y_RNA.593-201ENST00000410292 98 ntBASIC2.14□□□□□ -2.07
PCDHA11Q9Y5I1 AC245047.7-201ENST00000440265 293 ntBASIC2.14□□□□□ -2.07
PCDHA11Q9Y5I1 AC245517.4-201ENST00000448601 281 ntBASIC2.14□□□□□ -2.07
PCDHA11Q9Y5I1 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
PCDHA11Q9Y5I1 RNU7-2P-201ENST00000516096 62 ntBASIC2.14□□□□□ -2.07
PCDHA11Q9Y5I1 RNU7-35P-201ENST00000517174 62 ntBASIC2.14□□□□□ -2.07
PCDHA11Q9Y5I1 AC096720.1-201ENST00000604441 183 ntBASIC2.14□□□□□ -2.07
PCDHA11Q9Y5I1 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
PCDHA11Q9Y5I1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.14□□□□□ -2.07
PCDHA11Q9Y5I1 AP000648.3-201ENST00000623539 4507 ntBASIC2.14□□□□□ -2.07
PCDHA11Q9Y5I1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 AC131280.1-202ENST00000624067 4211 ntBASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 RNA5SP160-201ENST00000364866 120 ntBASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 SNORA25.9-201ENST00000365087 128 ntBASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 RNU6-1152P-201ENST00000384576 107 ntBASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 MIR520C-201ENST00000385005 87 ntBASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 SNORD13-201ENST00000459299 104 ntBASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 TRMT112P2-201ENST00000512910 132 ntBASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 RNU6-162P-201ENST00000516228 103 ntBASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 MIR4713-201ENST00000582691 75 ntBASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 MIR6840-201ENST00000611937 71 ntBASIC2.13□□□□□ -2.07
PCDHA11Q9Y5I1 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
PCDHA11Q9Y5I1 MIR494-201ENST00000349529 81 ntBASIC2.12□□□□□ -2.07
PCDHA11Q9Y5I1 Y_RNA.17-201ENST00000362433 111 ntBASIC2.12□□□□□ -2.07
PCDHA11Q9Y5I1 MIR653-201ENST00000385279 96 ntBASIC2.12□□□□□ -2.07
PCDHA11Q9Y5I1 RNU6-602P-201ENST00000411155 105 ntBASIC2.12□□□□□ -2.07
PCDHA11Q9Y5I1 AC004965.1-201ENST00000413033 213 ntBASIC2.12□□□□□ -2.07
PCDHA11Q9Y5I1 SNORA25.15-201ENST00000516487 89 ntBASIC2.12□□□□□ -2.07
PCDHA11Q9Y5I1 Y_RNA.705-201ENST00000516862 110 ntBASIC2.12□□□□□ -2.07
PCDHA11Q9Y5I1 AP003327.1-201ENST00000529684 127 ntBASIC2.12□□□□□ -2.07
PCDHA11Q9Y5I1 MIR4299-201ENST00000577899 72 ntBASIC2.12□□□□□ -2.07
PCDHA11Q9Y5I1 MIR4439-201ENST00000583746 80 ntBASIC2.12□□□□□ -2.07
PCDHA11Q9Y5I1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PCDHA11Q9Y5I1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PCDHA11Q9Y5I1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms