Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RNA5SP237-201ENST00000410414 113 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 RNU2-38P-201ENST00000410856 79 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 AL121914.1-201ENST00000450188 156 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 SNORD127-201ENST00000458892 86 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 SNORD116-25-201ENST00000516517 92 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 SCARNA15-202ENST00000516881 127 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 AP003327.1-201ENST00000529684 127 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 MIR378D2-201ENST00000580636 98 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 AC021613.1-201ENST00000623880 111 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.47-201ENST00000362697 108 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.54-201ENST00000362766 105 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.121-201ENST00000363309 113 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.149-201ENST00000363558 117 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.269-201ENST00000364685 89 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 MIR598-201ENST00000384868 97 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 RNU6-679P-201ENST00000391003 106 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 SNORD58.1-201ENST00000391313 66 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 RNU4-83P-201ENST00000410863 133 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 SNORA40.8-201ENST00000411034 126 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 AL358176.2-201ENST00000425769 204 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 SEPT7P4-201ENST00000437076 306 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 AC141846.1-201ENST00000568348 142 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 MIR3678-201ENST00000578455 94 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 AC008737.2-201ENST00000599446 118 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAPPC4Q9Y296 SNORA22.1-201ENST00000362701 134 ntBASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.288-201ENST00000364854 92 ntBASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 RNA5SP117-201ENST00000365294 118 ntBASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.508-201ENST00000384502 114 ntBASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 SNORA20-201ENST00000384662 132 ntBASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 MIR624-201ENST00000385217 97 ntBASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 U8.15-201ENST00000390947 134 ntBASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 RNA5SP127-201ENST00000411051 133 ntBASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 AC096949.1-201ENST00000412047 152 ntBASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 uc_338.16-201ENST00000621804 95 ntBASIC0.23□□□□□ -2.37
TRAPPC4Q9Y296 MIR103A1-201ENST00000362165 78 ntBASIC0.22□□□□□ -2.37
TRAPPC4Q9Y296 SNORD44.1-201ENST00000363202 61 ntBASIC0.22□□□□□ -2.37
TRAPPC4Q9Y296 SNORD118-201ENST00000363593 134 ntBASIC0.22□□□□□ -2.37
TRAPPC4Q9Y296 RNY1-201ENST00000364228 113 ntBASIC0.22□□□□□ -2.37
TRAPPC4Q9Y296 SNORA8.2-201ENST00000384372 139 ntBASIC0.22□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.588-201ENST00000391254 102 ntBASIC0.22□□□□□ -2.37
TRAPPC4Q9Y296 SNORD71-201ENST00000411292 86 ntBASIC0.22□□□□□ -2.37
TRAPPC4Q9Y296 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.22□□□□□ -2.37
TRAPPC4Q9Y296 MTND1P19-201ENST00000511780 315 ntBASIC0.22□□□□□ -2.37
TRAPPC4Q9Y296 SNORA25.12-201ENST00000516202 82 ntBASIC0.22□□□□□ -2.37
TRAPPC4Q9Y296 RNY3P16-201ENST00000516338 101 ntBASIC0.22□□□□□ -2.37
TRAPPC4Q9Y296 RNU6-765P-201ENST00000516916 99 ntBASIC0.22□□□□□ -2.37
TRAPPC4Q9Y296 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.308-201ENST00000365043 101 ntBASIC0.21□□□□□ -2.38
TRAPPC4Q9Y296 RNU6-949P-201ENST00000384040 107 ntBASIC0.21□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.556-201ENST00000384677 113 ntBASIC0.21□□□□□ -2.38
TRAPPC4Q9Y296 RPL39P25-201ENST00000449384 154 ntBASIC0.21□□□□□ -2.38
TRAPPC4Q9Y296 RNU6-1149P-201ENST00000516810 97 ntBASIC0.21□□□□□ -2.38
TRAPPC4Q9Y296 RNU7-70P-201ENST00000516941 66 ntBASIC0.21□□□□□ -2.38
TRAPPC4Q9Y296 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
TRAPPC4Q9Y296 AC022523.2-201ENST00000561045 150 ntBASIC0.21□□□□□ -2.38
TRAPPC4Q9Y296 AC133485.4-201ENST00000561835 220 ntBASIC0.21□□□□□ -2.38
TRAPPC4Q9Y296 MIR6082-201ENST00000613604 109 ntBASIC0.21□□□□□ -2.38
TRAPPC4Q9Y296 AC078938.1-201ENST00000620993 318 ntBASIC0.21□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.13-201ENST00000362403 112 ntBASIC0.2□□□□□ -2.38
TRAPPC4Q9Y296 SNORD114-23-201ENST00000363536 72 ntBASIC0.2□□□□□ -2.38
TRAPPC4Q9Y296 RNU6-643P-201ENST00000384018 107 ntBASIC0.2□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.459-201ENST00000384251 102 ntBASIC0.2□□□□□ -2.38
TRAPPC4Q9Y296 RNU6-493P-201ENST00000391321 108 ntBASIC0.2□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.617-201ENST00000410920 90 ntBASIC0.2□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.668-201ENST00000516233 93 ntBASIC0.2□□□□□ -2.38
TRAPPC4Q9Y296 MIR4431-201ENST00000579990 94 ntBASIC0.2□□□□□ -2.38
TRAPPC4Q9Y296 MIR4308-201ENST00000580634 81 ntBASIC0.2□□□□□ -2.38
TRAPPC4Q9Y296 RNU2-4P-201ENST00000606190 192 ntBASIC0.2□□□□□ -2.38
TRAPPC4Q9Y296 SNORA25.18-201ENST00000607153 114 ntBASIC0.2□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.20-201ENST00000362479 113 ntBASIC0.19□□□□□ -2.38
TRAPPC4Q9Y296 SNORA36.1-201ENST00000363424 132 ntBASIC0.19□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.539-201ENST00000384635 107 ntBASIC0.19□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.567-201ENST00000384736 106 ntBASIC0.19□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.571-201ENST00000384753 98 ntBASIC0.19□□□□□ -2.38
TRAPPC4Q9Y296 MTCYBP9-201ENST00000431021 303 ntBASIC0.19□□□□□ -2.38
TRAPPC4Q9Y296 SNRPGP12-201ENST00000449481 213 ntBASIC0.19□□□□□ -2.38
TRAPPC4Q9Y296 RNU6-893P-201ENST00000458841 100 ntBASIC0.19□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.797-201ENST00000515977 94 ntBASIC0.19□□□□□ -2.38
TRAPPC4Q9Y296 RNU6-863P-201ENST00000515989 104 ntBASIC0.19□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.673-201ENST00000516306 88 ntBASIC0.19□□□□□ -2.38
TRAPPC4Q9Y296 MIR4491-201ENST00000581087 68 ntBASIC0.19□□□□□ -2.38
TRAPPC4Q9Y296 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.19□□□□□ -2.38
TRAPPC4Q9Y296 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.133-201ENST00000363428 110 ntBASIC0.18□□□□□ -2.38
TRAPPC4Q9Y296 RNU6-275P-201ENST00000364910 107 ntBASIC0.18□□□□□ -2.38
TRAPPC4Q9Y296 SNORA18-201ENST00000384416 132 ntBASIC0.18□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.515-201ENST00000384535 112 ntBASIC0.18□□□□□ -2.38
TRAPPC4Q9Y296 RNU6-1086P-201ENST00000410930 100 ntBASIC0.18□□□□□ -2.38
TRAPPC4Q9Y296 RNU5E-9P-201ENST00000411164 104 ntBASIC0.18□□□□□ -2.38
TRAPPC4Q9Y296 Y_RNA.626-201ENST00000411288 95 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 203.4 ms