Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC105272.1-201ENST00000438604 198 ntBASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 AC108938.1-201ENST00000451204 136 ntBASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 RNU6-1194P-201ENST00000516208 104 ntBASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 GTF3AP2-201ENST00000557014 266 ntBASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 AC026271.5-201ENST00000577873 130 ntBASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 AL109933.3-201ENST00000619095 188 ntBASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 MIR7978-201ENST00000636158 59 ntBASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM35Q9UPQ4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 AC092435.3-201ENST00000565538 3654 ntBASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 SNORA67.4-201ENST00000384688 142 ntBASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 RNU1-101P-201ENST00000391171 127 ntBASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 AC097510.1-201ENST00000510945 133 ntBASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 RNA5SP445-201ENST00000515889 115 ntBASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 RNU2-19P-201ENST00000517288 84 ntBASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM35Q9UPQ4 AC108206.1-201ENST00000570186 4159 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 RNU6-1079P-201ENST00000362861 110 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 MIR563-201ENST00000385080 79 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 AL138827.1-201ENST00000402666 306 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 AC244023.1-201ENST00000426884 112 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 AC087499.2-201ENST00000432861 149 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 MIR4709-201ENST00000577272 72 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 MIR3140-201ENST00000583685 90 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 AC242498.1-201ENST00000604134 111 ntBASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM35Q9UPQ4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM35Q9UPQ4 MIR588-201ENST00000384900 83 ntBASIC3.62□□□□□ -1.83
TRIM35Q9UPQ4 MIR29C-201ENST00000385231 88 ntBASIC3.62□□□□□ -1.83
TRIM35Q9UPQ4 AC099513.1-201ENST00000490423 301 ntBASIC3.62□□□□□ -1.83
TRIM35Q9UPQ4 MIR5089-201ENST00000580047 84 ntBASIC3.62□□□□□ -1.83
TRIM35Q9UPQ4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM35Q9UPQ4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM35Q9UPQ4 RN7SL330P-201ENST00000469709 307 ntBASIC3.61□□□□□ -1.83
TRIM35Q9UPQ4 RNA5SP356-201ENST00000515972 94 ntBASIC3.61□□□□□ -1.83
TRIM35Q9UPQ4 MIR7106-201ENST00000612419 65 ntBASIC3.61□□□□□ -1.83
TRIM35Q9UPQ4 SNORA24B-201ENST00000384176 131 ntBASIC3.6□□□□□ -1.83
TRIM35Q9UPQ4 AC104389.3-201ENST00000445629 235 ntBASIC3.6□□□□□ -1.83
TRIM35Q9UPQ4 SUB1P4-201ENST00000566062 339 ntBASIC3.6□□□□□ -1.83
TRIM35Q9UPQ4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 MIR424-201ENST00000362227 98 ntBASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 RNU6-824P-201ENST00000363724 104 ntBASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 MIR520A-201ENST00000384862 85 ntBASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 RNA5SP21-201ENST00000410917 96 ntBASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 RNU11-2P-201ENST00000516898 142 ntBASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.59□□□□□ -1.83
TRIM35Q9UPQ4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM35Q9UPQ4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM35Q9UPQ4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 HMGN2P35-201ENST00000412164 270 ntBASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 BX510359.4-201ENST00000423750 193 ntBASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 AC006023.1-201ENST00000603944 259 ntBASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 AC092634.7-201ENST00000621022 103 ntBASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 TRDV1-202ENST00000621643 102 ntBASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TRIM35Q9UPQ4 AC062016.1-201ENST00000355719 319 ntBASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 AC009474.2-201ENST00000451383 136 ntBASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 RNA5SP437-201ENST00000517249 129 ntBASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 DLEU2_3.2-201ENST00000612883 73 ntBASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 AL161431.1-201ENST00000618966 4205 ntBASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM35Q9UPQ4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 MIR26A1-201ENST00000362205 77 ntBASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 RNU6-664P-201ENST00000362381 107 ntBASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 snoU13.27-201ENST00000459278 104 ntBASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 RNA5SP380-201ENST00000517190 98 ntBASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 MIR4319-201ENST00000577285 85 ntBASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 MIR3616-201ENST00000584070 92 ntBASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM35Q9UPQ4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 MIR30D-201ENST00000362283 70 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 RNA5SP117-201ENST00000365294 118 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 MIR9-1-201ENST00000385198 89 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 RNU7-41P-201ENST00000515917 61 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 RNU6-531P-201ENST00000516694 104 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 RNA5SP137-201ENST00000516833 135 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 MIR4696-201ENST00000581431 70 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 MIR3605-201ENST00000583214 100 ntBASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM35Q9UPQ4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM35Q9UPQ4 RNU4-58P-201ENST00000363192 141 ntBASIC3.54□□□□□ -1.84
TRIM35Q9UPQ4 RNU6-936P-201ENST00000384005 107 ntBASIC3.54□□□□□ -1.84
TRIM35Q9UPQ4 SNORD101-201ENST00000384027 73 ntBASIC3.54□□□□□ -1.84
TRIM35Q9UPQ4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms