Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SNORD116-25-201ENST00000516517 92 ntBASIC0.28□□□□□ -2.36
POLR2J3Q9H1A7 MRPS18CP4-201ENST00000535821 231 ntBASIC0.28□□□□□ -2.36
POLR2J3Q9H1A7 SNORA4-201ENST00000584302 138 ntBASIC0.28□□□□□ -2.36
POLR2J3Q9H1A7 AC243829.6-201ENST00000612652 106 ntBASIC0.28□□□□□ -2.36
POLR2J3Q9H1A7 Y_RNA.13-201ENST00000362403 112 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 SNORA22.1-201ENST00000362701 134 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 SNORA36.1-201ENST00000363424 132 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 SNORD27-201ENST00000363981 72 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 RNU6-923P-201ENST00000364753 107 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.454-201ENST00000384224 113 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.477-201ENST00000384352 108 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 MIR518A1-201ENST00000385068 85 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 SNORA79-201ENST00000408376 140 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 RNU4-83P-201ENST00000410863 133 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.626-201ENST00000411288 95 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 MTCYBP9-201ENST00000431021 303 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.673-201ENST00000516306 88 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 RNU6-1149P-201ENST00000516810 97 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 AC133485.4-201ENST00000561835 220 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 MIR4491-201ENST00000581087 68 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 SNORA25.18-201ENST00000607153 114 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 AC078938.1-201ENST00000620993 318 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 MIR6513-201ENST00000621188 64 ntBASIC0.27□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.149-201ENST00000363558 117 ntBASIC0.26□□□□□ -2.37
POLR2J3Q9H1A7 SNORD118-201ENST00000363593 134 ntBASIC0.26□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.288-201ENST00000364854 92 ntBASIC0.26□□□□□ -2.37
POLR2J3Q9H1A7 SNORA25.9-201ENST00000365087 128 ntBASIC0.26□□□□□ -2.37
POLR2J3Q9H1A7 MIR624-201ENST00000385217 97 ntBASIC0.26□□□□□ -2.37
POLR2J3Q9H1A7 MIR644A-201ENST00000385262 94 ntBASIC0.26□□□□□ -2.37
POLR2J3Q9H1A7 RNA5SP261-201ENST00000410536 106 ntBASIC0.26□□□□□ -2.37
POLR2J3Q9H1A7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
POLR2J3Q9H1A7 AC243829.3-201ENST00000622177 108 ntBASIC0.26□□□□□ -2.37
POLR2J3Q9H1A7 MTND5P32-201ENST00000560711 1802 ntBASIC0.26□□□□□ -2.37
POLR2J3Q9H1A7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.26□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.20-201ENST00000362479 113 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.65-201ENST00000362846 100 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 RNU4-16P-201ENST00000364737 141 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 RNU1-133P-201ENST00000364867 167 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 RNY1P13-201ENST00000365030 105 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 RNU6-643P-201ENST00000384018 107 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 SNORA8.2-201ENST00000384372 139 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.571-201ENST00000384753 98 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 MIR216A-201ENST00000385063 110 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 MIR548H3-201ENST00000408771 118 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 RNA5SP237-201ENST00000410414 113 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 SNORA40.8-201ENST00000411034 126 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 RNA5SP127-201ENST00000411051 133 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.797-201ENST00000515977 94 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 SNORA25.12-201ENST00000516202 82 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.757-201ENST00000578934 114 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 MIR3152-201ENST00000579801 74 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 MIR6082-201ENST00000613604 109 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 uc_338.16-201ENST00000621804 95 ntBASIC0.25□□□□□ -2.37
POLR2J3Q9H1A7 RNA5SP432-201ENST00000362480 116 ntBASIC0.24□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.121-201ENST00000363309 113 ntBASIC0.24□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.171-201ENST00000363760 102 ntBASIC0.24□□□□□ -2.37
POLR2J3Q9H1A7 RNA5SP117-201ENST00000365294 118 ntBASIC0.24□□□□□ -2.37
POLR2J3Q9H1A7 SNORA18-201ENST00000384416 132 ntBASIC0.24□□□□□ -2.37
POLR2J3Q9H1A7 SNRPGP12-201ENST00000449481 213 ntBASIC0.24□□□□□ -2.37
POLR2J3Q9H1A7 MIR3128-201ENST00000581957 66 ntBASIC0.24□□□□□ -2.37
POLR2J3Q9H1A7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.24□□□□□ -2.37
POLR2J3Q9H1A7 U6.106-201ENST00000636360 105 ntBASIC0.24□□□□□ -2.37
POLR2J3Q9H1A7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.32-201ENST00000362589 110 ntBASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 RNU6-403P-201ENST00000363163 104 ntBASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.182-201ENST00000363880 111 ntBASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.412-201ENST00000384001 104 ntBASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 RNU6-949P-201ENST00000384040 107 ntBASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 RNU6-1011P-201ENST00000384668 107 ntBASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.567-201ENST00000384736 106 ntBASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 RNU6-863P-201ENST00000515989 104 ntBASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 RNU6-327P-201ENST00000516270 127 ntBASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 SCARNA15.1-201ENST00000516384 125 ntBASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 RNA5SP134-201ENST00000516492 96 ntBASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 SNORA31.14-201ENST00000516728 116 ntBASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 AL589743.1-201ENST00000551932 2712 ntBASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
POLR2J3Q9H1A7 RNU6-349P-201ENST00000362402 107 ntBASIC0.22□□□□□ -2.37
POLR2J3Q9H1A7 RNU6-275P-201ENST00000364910 107 ntBASIC0.22□□□□□ -2.37
POLR2J3Q9H1A7 Y_RNA.470-201ENST00000384307 117 ntBASIC0.22□□□□□ -2.37
POLR2J3Q9H1A7 RNU6-918P-201ENST00000391219 106 ntBASIC0.22□□□□□ -2.37
POLR2J3Q9H1A7 SNORA25.16-201ENST00000516741 121 ntBASIC0.22□□□□□ -2.37
POLR2J3Q9H1A7 RNU6-1223P-201ENST00000517124 104 ntBASIC0.22□□□□□ -2.37
POLR2J3Q9H1A7 AP003327.1-201ENST00000529684 127 ntBASIC0.22□□□□□ -2.37
POLR2J3Q9H1A7 MIR4711-201ENST00000578274 70 ntBASIC0.22□□□□□ -2.37
POLR2J3Q9H1A7 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
POLR2J3Q9H1A7 Y_RNA.4-201ENST00000362333 112 ntBASIC0.21□□□□□ -2.38
POLR2J3Q9H1A7 Y_RNA.60-201ENST00000362831 98 ntBASIC0.21□□□□□ -2.38
POLR2J3Q9H1A7 Y_RNA.350-201ENST00000365409 98 ntBASIC0.21□□□□□ -2.38
POLR2J3Q9H1A7 SNORA20-201ENST00000384662 132 ntBASIC0.21□□□□□ -2.38
POLR2J3Q9H1A7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.21□□□□□ -2.38
POLR2J3Q9H1A7 RNA5SP236-201ENST00000516169 116 ntBASIC0.21□□□□□ -2.38
POLR2J3Q9H1A7 RNU6-111P-201ENST00000517179 105 ntBASIC0.21□□□□□ -2.38
POLR2J3Q9H1A7 AC022523.2-201ENST00000561045 150 ntBASIC0.21□□□□□ -2.38
POLR2J3Q9H1A7 MTND5P34-201ENST00000568888 325 ntBASIC0.21□□□□□ -2.38
POLR2J3Q9H1A7 MIR4431-201ENST00000579990 94 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms