Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MIR1257-201ENST00000408490 117 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 MIR1912-201ENST00000410389 80 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 AC113618.1-201ENST00000416747 285 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 Y_RNA.650-201ENST00000459002 102 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 RNU6-863P-201ENST00000515989 104 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 Y_RNA.777-201ENST00000516982 102 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 AL442663.2-201ENST00000554385 511 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 MIR3129-201ENST00000581095 76 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 MIR4636-201ENST00000582271 80 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 MIR4305-201ENST00000583252 102 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 Y_RNA.771-201ENST00000598668 102 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 AC011921.3-201ENST00000605540 361 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 AL442067.1-201ENST00000613261 223 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 AL365265.1-201ENST00000621045 234 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 uc_338.16-201ENST00000621804 95 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 Y_RNA.789-201ENST00000622480 102 ntBASIC0.16□□□□□ -2.38
RPAP1Q9BWH6 Y_RNA.42-201ENST00000362660 108 ntBASIC0.15□□□□□ -2.39
RPAP1Q9BWH6 RNU6-653P-201ENST00000363074 106 ntBASIC0.15□□□□□ -2.39
RPAP1Q9BWH6 SNORD118-201ENST00000363593 134 ntBASIC0.15□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.416-201ENST00000384014 113 ntBASIC0.15□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.432-201ENST00000384087 111 ntBASIC0.15□□□□□ -2.39
RPAP1Q9BWH6 RNY3P5-201ENST00000384127 102 ntBASIC0.15□□□□□ -2.39
RPAP1Q9BWH6 MIR616-201ENST00000385293 97 ntBASIC0.15□□□□□ -2.39
RPAP1Q9BWH6 U8.15-201ENST00000390947 134 ntBASIC0.15□□□□□ -2.39
RPAP1Q9BWH6 RNU6-381P-201ENST00000391259 108 ntBASIC0.15□□□□□ -2.39
RPAP1Q9BWH6 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.15□□□□□ -2.39
RPAP1Q9BWH6 RNU6-126P-201ENST00000516685 103 ntBASIC0.15□□□□□ -2.39
RPAP1Q9BWH6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.15□□□□□ -2.39
RPAP1Q9BWH6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.15□□□□□ -2.39
RPAP1Q9BWH6 SNORA25.18-201ENST00000607153 114 ntBASIC0.15□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.170-201ENST00000363746 110 ntBASIC0.14□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.202-201ENST00000364083 110 ntBASIC0.14□□□□□ -2.39
RPAP1Q9BWH6 SNORA8.2-201ENST00000384372 139 ntBASIC0.14□□□□□ -2.39
RPAP1Q9BWH6 MIR644A-201ENST00000385262 94 ntBASIC0.14□□□□□ -2.39
RPAP1Q9BWH6 MT-TF-201ENST00000387314 71 ntBASIC0.14□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.588-201ENST00000391254 102 ntBASIC0.14□□□□□ -2.39
RPAP1Q9BWH6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.14□□□□□ -2.39
RPAP1Q9BWH6 RNU6-448P-201ENST00000517052 107 ntBASIC0.14□□□□□ -2.39
RPAP1Q9BWH6 AC133485.4-201ENST00000561835 220 ntBASIC0.14□□□□□ -2.39
RPAP1Q9BWH6 AL356055.1-201ENST00000602528 446 ntBASIC0.14□□□□□ -2.39
RPAP1Q9BWH6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.199-201ENST00000364014 102 ntBASIC0.13□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.430-201ENST00000384081 110 ntBASIC0.13□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.483-201ENST00000384380 101 ntBASIC0.13□□□□□ -2.39
RPAP1Q9BWH6 SNORA26-201ENST00000391286 122 ntBASIC0.13□□□□□ -2.39
RPAP1Q9BWH6 SNORD93-201ENST00000408813 74 ntBASIC0.13□□□□□ -2.39
RPAP1Q9BWH6 MTATP8P1-201ENST00000467115 207 ntBASIC0.13□□□□□ -2.39
RPAP1Q9BWH6 MIR4431-201ENST00000579990 94 ntBASIC0.13□□□□□ -2.39
RPAP1Q9BWH6 MIR5197-201ENST00000583721 112 ntBASIC0.13□□□□□ -2.39
RPAP1Q9BWH6 U2.14-201ENST00000615943 113 ntBASIC0.13□□□□□ -2.39
RPAP1Q9BWH6 AL662814.1-201ENST00000617364 121 ntBASIC0.13□□□□□ -2.39
RPAP1Q9BWH6 AC091932.4-201ENST00000623386 200 ntBASIC0.13□□□□□ -2.39
RPAP1Q9BWH6 MIR6841-201ENST00000637129 72 ntBASIC0.13□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.13-201ENST00000362403 112 ntBASIC0.12□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.76-201ENST00000362931 109 ntBASIC0.12□□□□□ -2.39
RPAP1Q9BWH6 RNU6-923P-201ENST00000364753 107 ntBASIC0.12□□□□□ -2.39
RPAP1Q9BWH6 RNU6-815P-201ENST00000384080 113 ntBASIC0.12□□□□□ -2.39
RPAP1Q9BWH6 RNU6-472P-201ENST00000384299 107 ntBASIC0.12□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.549-201ENST00000384657 102 ntBASIC0.12□□□□□ -2.39
RPAP1Q9BWH6 RNU4-83P-201ENST00000410863 133 ntBASIC0.12□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.618-201ENST00000410949 107 ntBASIC0.12□□□□□ -2.39
RPAP1Q9BWH6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.12□□□□□ -2.39
RPAP1Q9BWH6 RNU6-1258P-201ENST00000516911 111 ntBASIC0.12□□□□□ -2.39
RPAP1Q9BWH6 MIR5589-201ENST00000579442 60 ntBASIC0.12□□□□□ -2.39
RPAP1Q9BWH6 MIR335-201ENST00000362173 94 ntBASIC0.11□□□□□ -2.39
RPAP1Q9BWH6 MIR302B-201ENST00000362188 73 ntBASIC0.11□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.176-201ENST00000363815 109 ntBASIC0.11□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.518-201ENST00000384552 113 ntBASIC0.11□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.567-201ENST00000384736 106 ntBASIC0.11□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.604-201ENST00000410574 102 ntBASIC0.11□□□□□ -2.39
RPAP1Q9BWH6 RNY3P16-201ENST00000516338 101 ntBASIC0.11□□□□□ -2.39
RPAP1Q9BWH6 SCARNA15-202ENST00000516881 127 ntBASIC0.11□□□□□ -2.39
RPAP1Q9BWH6 AC141846.1-201ENST00000568348 142 ntBASIC0.11□□□□□ -2.39
RPAP1Q9BWH6 MIR4491-201ENST00000581087 68 ntBASIC0.11□□□□□ -2.39
RPAP1Q9BWH6 AL365205.2-201ENST00000594586 68 ntBASIC0.11□□□□□ -2.39
RPAP1Q9BWH6 AL596211.1-201ENST00000569873 2277 ntBASIC0.11□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.60-201ENST00000362831 98 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 RNU6-797P-201ENST00000363101 109 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 RNU6-238P-201ENST00000363313 106 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 RNU6-978P-201ENST00000364371 103 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 RNU6-1292P-201ENST00000383856 107 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 RNU6-1227P-201ENST00000383981 107 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.542-201ENST00000384641 111 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.590-201ENST00000410140 107 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 RNU4-43P-201ENST00000410628 137 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 Z95118.1-201ENST00000421372 247 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 SEPT7P4-201ENST00000437076 306 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 SNORA31.14-201ENST00000516728 116 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 MIR6082-201ENST00000613604 109 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 MIR8062-201ENST00000621515 85 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 MIR371B-201ENST00000638082 66 ntBASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.1□□□□□ -2.39
RPAP1Q9BWH6 Y_RNA.32-201ENST00000362589 110 ntBASIC0.09□□□□□ -2.39
RPAP1Q9BWH6 RNU6-403P-201ENST00000363163 104 ntBASIC0.09□□□□□ -2.39
RPAP1Q9BWH6 RNU6-639P-201ENST00000384074 107 ntBASIC0.09□□□□□ -2.39
RPAP1Q9BWH6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.09□□□□□ -2.39
RPAP1Q9BWH6 AC069271.1-201ENST00000445577 156 ntBASIC0.09□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 234.5 ms