Protein–RNA interactions for Protein: Q9BR11

ZSWIM1, Zinc finger SWIM domain-containing protein 1, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM1Q9BR11 MIR548AO-201ENST00000579992 96 ntBASIC1.62□□□□□ -2.15
ZSWIM1Q9BR11 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.62□□□□□ -2.15
ZSWIM1Q9BR11 MIR3192-201ENST00000584920 77 ntBASIC1.62□□□□□ -2.15
ZSWIM1Q9BR11 BX248123.2-201ENST00000606318 124 ntBASIC1.62□□□□□ -2.15
ZSWIM1Q9BR11 RNU6-94P-201ENST00000607728 107 ntBASIC1.62□□□□□ -2.15
ZSWIM1Q9BR11 AL096861.1-201ENST00000610899 123 ntBASIC1.62□□□□□ -2.15
ZSWIM1Q9BR11 MIR8065-201ENST00000620577 100 ntBASIC1.62□□□□□ -2.15
ZSWIM1Q9BR11 AL391516.1-201ENST00000554380 2449 ntBASIC1.62□□□□□ -2.15
ZSWIM1Q9BR11 WWP1P1-201ENST00000466609 2769 ntBASIC1.61□□□□□ -2.15
ZSWIM1Q9BR11 SNORD33-201ENST00000362761 85 ntBASIC1.61□□□□□ -2.15
ZSWIM1Q9BR11 RNU6-1107P-201ENST00000364817 104 ntBASIC1.61□□□□□ -2.15
ZSWIM1Q9BR11 SNORD1A-201ENST00000364968 72 ntBASIC1.61□□□□□ -2.15
ZSWIM1Q9BR11 Y_RNA.344-201ENST00000365381 112 ntBASIC1.61□□□□□ -2.15
ZSWIM1Q9BR11 RNU4-69P-201ENST00000410677 143 ntBASIC1.61□□□□□ -2.15
ZSWIM1Q9BR11 RPL39P34-201ENST00000477141 156 ntBASIC1.61□□□□□ -2.15
ZSWIM1Q9BR11 MIR4498-201ENST00000577599 66 ntBASIC1.61□□□□□ -2.15
ZSWIM1Q9BR11 MIR4781-201ENST00000585250 76 ntBASIC1.61□□□□□ -2.15
ZSWIM1Q9BR11 AC087741.2-201ENST00000619415 172 ntBASIC1.61□□□□□ -2.15
ZSWIM1Q9BR11 AL589743.1-201ENST00000551932 2712 ntBASIC1.61□□□□□ -2.15
ZSWIM1Q9BR11 Y_RNA.49-201ENST00000362714 112 ntBASIC1.6□□□□□ -2.15
ZSWIM1Q9BR11 Y_RNA.118-201ENST00000363300 101 ntBASIC1.6□□□□□ -2.15
ZSWIM1Q9BR11 RNU6-60P-201ENST00000364792 103 ntBASIC1.6□□□□□ -2.15
ZSWIM1Q9BR11 Y_RNA.354-201ENST00000365448 111 ntBASIC1.6□□□□□ -2.15
ZSWIM1Q9BR11 Y_RNA.470-201ENST00000384307 117 ntBASIC1.6□□□□□ -2.15
ZSWIM1Q9BR11 RNU6-602P-201ENST00000411155 105 ntBASIC1.6□□□□□ -2.15
ZSWIM1Q9BR11 AC009474.2-201ENST00000451383 136 ntBASIC1.6□□□□□ -2.15
ZSWIM1Q9BR11 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.6□□□□□ -2.15
ZSWIM1Q9BR11 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ZSWIM1Q9BR11 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
ZSWIM1Q9BR11 RNU1-42P-201ENST00000364033 160 ntBASIC1.59□□□□□ -2.15
ZSWIM1Q9BR11 RNU6-106P-201ENST00000384405 107 ntBASIC1.59□□□□□ -2.15
ZSWIM1Q9BR11 AC027119.1-201ENST00000440877 241 ntBASIC1.59□□□□□ -2.15
ZSWIM1Q9BR11 AP003716.2-201ENST00000528260 108 ntBASIC1.59□□□□□ -2.15
ZSWIM1Q9BR11 CYP3A52P-201ENST00000563326 91 ntBASIC1.59□□□□□ -2.15
ZSWIM1Q9BR11 MIR8063-201ENST00000621930 81 ntBASIC1.59□□□□□ -2.15
ZSWIM1Q9BR11 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
ZSWIM1Q9BR11 AP000648.3-201ENST00000623539 4507 ntBASIC1.58□□□□□ -2.16
ZSWIM1Q9BR11 Y_RNA.116-201ENST00000363292 103 ntBASIC1.58□□□□□ -2.16
ZSWIM1Q9BR11 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
ZSWIM1Q9BR11 MIR1302-7-201ENST00000408841 72 ntBASIC1.58□□□□□ -2.16
ZSWIM1Q9BR11 AC090844.1-201ENST00000422019 156 ntBASIC1.58□□□□□ -2.16
ZSWIM1Q9BR11 snoU13.25-201ENST00000458945 104 ntBASIC1.58□□□□□ -2.16
ZSWIM1Q9BR11 MIR1270-201ENST00000459320 83 ntBASIC1.58□□□□□ -2.16
ZSWIM1Q9BR11 AC079140.2-201ENST00000506193 142 ntBASIC1.58□□□□□ -2.16
ZSWIM1Q9BR11 RNU7-6P-201ENST00000516845 62 ntBASIC1.58□□□□□ -2.16
ZSWIM1Q9BR11 MIR548AE2-201ENST00000583456 67 ntBASIC1.58□□□□□ -2.16
ZSWIM1Q9BR11 SNORA63.5-201ENST00000363548 123 ntBASIC1.57□□□□□ -2.16
ZSWIM1Q9BR11 Y_RNA.309-201ENST00000365046 111 ntBASIC1.57□□□□□ -2.16
ZSWIM1Q9BR11 RNU6-147P-201ENST00000383983 107 ntBASIC1.57□□□□□ -2.16
ZSWIM1Q9BR11 RNU6-554P-201ENST00000410466 106 ntBASIC1.57□□□□□ -2.16
ZSWIM1Q9BR11 RPL30P7-201ENST00000479312 323 ntBASIC1.57□□□□□ -2.16
ZSWIM1Q9BR11 AC023790.1-201ENST00000482174 347 ntBASIC1.57□□□□□ -2.16
ZSWIM1Q9BR11 AC008834.1-201ENST00000511612 175 ntBASIC1.57□□□□□ -2.16
ZSWIM1Q9BR11 RNA5SP33-201ENST00000516687 98 ntBASIC1.57□□□□□ -2.16
ZSWIM1Q9BR11 uc_338.28-201ENST00000612082 187 ntBASIC1.57□□□□□ -2.16
ZSWIM1Q9BR11 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
ZSWIM1Q9BR11 AL162726.3-218ENST00000636401 95 ntBASIC1.57□□□□□ -2.16
ZSWIM1Q9BR11 U8.6-201ENST00000364939 135 ntBASIC1.56□□□□□ -2.16
ZSWIM1Q9BR11 RNU6-1014P-201ENST00000383940 103 ntBASIC1.56□□□□□ -2.16
ZSWIM1Q9BR11 MIR517C-201ENST00000385103 95 ntBASIC1.56□□□□□ -2.16
ZSWIM1Q9BR11 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
ZSWIM1Q9BR11 RPL39P39-201ENST00000455840 151 ntBASIC1.56□□□□□ -2.16
ZSWIM1Q9BR11 AC068339.1-201ENST00000526965 141 ntBASIC1.56□□□□□ -2.16
ZSWIM1Q9BR11 MIR5009-201ENST00000578736 100 ntBASIC1.56□□□□□ -2.16
ZSWIM1Q9BR11 MIR3613-201ENST00000579844 87 ntBASIC1.56□□□□□ -2.16
ZSWIM1Q9BR11 MIR378A-201ENST00000362177 66 ntBASIC1.55□□□□□ -2.16
ZSWIM1Q9BR11 Y_RNA.163-201ENST00000363702 113 ntBASIC1.55□□□□□ -2.16
ZSWIM1Q9BR11 Y_RNA.508-201ENST00000384502 114 ntBASIC1.55□□□□□ -2.16
ZSWIM1Q9BR11 RNU6-1065P-201ENST00000384513 106 ntBASIC1.55□□□□□ -2.16
ZSWIM1Q9BR11 SNORA67.5-201ENST00000391036 107 ntBASIC1.55□□□□□ -2.16
ZSWIM1Q9BR11 RNU4-62P-201ENST00000410125 130 ntBASIC1.55□□□□□ -2.16
ZSWIM1Q9BR11 MIR1912-201ENST00000410389 80 ntBASIC1.55□□□□□ -2.16
ZSWIM1Q9BR11 AC245517.4-201ENST00000448601 281 ntBASIC1.55□□□□□ -2.16
ZSWIM1Q9BR11 RNU7-35P-201ENST00000517174 62 ntBASIC1.55□□□□□ -2.16
ZSWIM1Q9BR11 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.55□□□□□ -2.16
ZSWIM1Q9BR11 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.55□□□□□ -2.16
ZSWIM1Q9BR11 SNORD38B-201ENST00000384690 67 ntBASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 SNORA67.6-201ENST00000391093 99 ntBASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 RNU1-78P-201ENST00000391248 165 ntBASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 AC245047.7-201ENST00000440265 293 ntBASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 AL031737.1-201ENST00000450125 223 ntBASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 AL133373.1-201ENST00000497098 94 ntBASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 RNU6-165P-201ENST00000517170 99 ntBASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 SNORD53B-201ENST00000577887 78 ntBASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 MIR3664-201ENST00000579074 99 ntBASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 PRELID3BP2-201ENST00000605362 201 ntBASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 Y_RNA.773-201ENST00000607168 90 ntBASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 snoU13.31-201ENST00000607291 104 ntBASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 SNORD38B-202ENST00000625943 69 ntBASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.54□□□□□ -2.16
ZSWIM1Q9BR11 MT-TN-201ENST00000387400 73 ntBASIC1.53□□□□□ -2.16
ZSWIM1Q9BR11 SNORD77B-201ENST00000391112 67 ntBASIC1.53□□□□□ -2.16
ZSWIM1Q9BR11 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.53□□□□□ -2.16
ZSWIM1Q9BR11 AC108667.1-201ENST00000428618 249 ntBASIC1.53□□□□□ -2.16
ZSWIM1Q9BR11 RNA5SP61-201ENST00000516453 100 ntBASIC1.53□□□□□ -2.16
ZSWIM1Q9BR11 RNU11-2P-201ENST00000516898 142 ntBASIC1.53□□□□□ -2.16
ZSWIM1Q9BR11 AC019176.1-201ENST00000518519 225 ntBASIC1.53□□□□□ -2.16
ZSWIM1Q9BR11 MIR4422-201ENST00000581938 83 ntBASIC1.53□□□□□ -2.16
ZSWIM1Q9BR11 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 216.9 ms