Protein–RNA interactions for Protein: Q96KP6

TNIP3, TNFAIP3-interacting protein 3, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3Q96KP6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.03□□□□□ -2.24
TNIP3Q96KP6 MIR548J-201ENST00000408833 112 ntBASIC1.03□□□□□ -2.24
TNIP3Q96KP6 snoU13.2-201ENST00000459201 104 ntBASIC1.03□□□□□ -2.24
TNIP3Q96KP6 MIR3152-201ENST00000579801 74 ntBASIC1.03□□□□□ -2.24
TNIP3Q96KP6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
TNIP3Q96KP6 RNU6-369P-201ENST00000362515 102 ntBASIC1.02□□□□□ -2.25
TNIP3Q96KP6 SNORD114-27-201ENST00000363766 70 ntBASIC1.02□□□□□ -2.25
TNIP3Q96KP6 RNU6-682P-201ENST00000363843 106 ntBASIC1.02□□□□□ -2.25
TNIP3Q96KP6 Y_RNA.337-201ENST00000365312 102 ntBASIC1.02□□□□□ -2.25
TNIP3Q96KP6 Y_RNA.433-201ENST00000384089 102 ntBASIC1.02□□□□□ -2.25
TNIP3Q96KP6 RPS26P5-201ENST00000418544 335 ntBASIC1.02□□□□□ -2.25
TNIP3Q96KP6 AC108059.2-201ENST00000434626 151 ntBASIC1.02□□□□□ -2.25
TNIP3Q96KP6 AC113410.1-201ENST00000505029 247 ntBASIC1.02□□□□□ -2.25
TNIP3Q96KP6 RNU7-121P-201ENST00000516604 62 ntBASIC1.02□□□□□ -2.25
TNIP3Q96KP6 Y_RNA.700-201ENST00000516806 100 ntBASIC1.02□□□□□ -2.25
TNIP3Q96KP6 MTND5P32-201ENST00000560711 1802 ntBASIC1.02□□□□□ -2.25
TNIP3Q96KP6 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
TNIP3Q96KP6 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
TNIP3Q96KP6 Y_RNA.357-201ENST00000365487 109 ntBASIC1.01□□□□□ -2.25
TNIP3Q96KP6 PCNPP3-201ENST00000393579 471 ntBASIC1.01□□□□□ -2.25
TNIP3Q96KP6 RNU7-120P-201ENST00000459334 63 ntBASIC1.01□□□□□ -2.25
TNIP3Q96KP6 RNU6-113P-201ENST00000516653 101 ntBASIC1.01□□□□□ -2.25
TNIP3Q96KP6 MIR4771-2-201ENST00000577758 74 ntBASIC1.01□□□□□ -2.25
TNIP3Q96KP6 MIR4771-1-201ENST00000582617 74 ntBASIC1.01□□□□□ -2.25
TNIP3Q96KP6 AL353765.1-201ENST00000605514 183 ntBASIC1.01□□□□□ -2.25
TNIP3Q96KP6 MIR6857-201ENST00000613267 93 ntBASIC1.01□□□□□ -2.25
TNIP3Q96KP6 AC010332.2-201ENST00000613083 1904 ntBASIC1.01□□□□□ -2.25
TNIP3Q96KP6 Y_RNA.85-201ENST00000363014 111 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 Y_RNA.240-201ENST00000364469 95 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 RNU6-1082P-201ENST00000364574 107 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 Y_RNA.430-201ENST00000384081 110 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 Y_RNA.441-201ENST00000384123 112 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 SNORA20-201ENST00000384662 132 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 MIR532-201ENST00000385025 91 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 MIR605-201ENST00000385078 83 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 RNU6-907P-201ENST00000390924 102 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 SNORD99-201ENST00000408612 74 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 RNU6-1165P-201ENST00000410119 107 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 AC015818.7-201ENST00000428754 109 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 AC087499.7-201ENST00000441958 109 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 MIR1273G-201ENST00000577677 100 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 AC004792.1-201ENST00000614523 137 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 AC021613.1-201ENST00000623880 111 ntBASIC1□□□□□ -2.25
TNIP3Q96KP6 MIR96-201ENST00000362288 78 ntBASIC0.99□□□□□ -2.25
TNIP3Q96KP6 RNA5SP62-201ENST00000363457 110 ntBASIC0.99□□□□□ -2.25
TNIP3Q96KP6 RNA5SP457-201ENST00000363657 124 ntBASIC0.99□□□□□ -2.25
TNIP3Q96KP6 RNU6-1318P-201ENST00000365389 103 ntBASIC0.99□□□□□ -2.25
TNIP3Q96KP6 MIR18B-201ENST00000454574 71 ntBASIC0.99□□□□□ -2.25
TNIP3Q96KP6 RNU6-861P-201ENST00000516745 106 ntBASIC0.99□□□□□ -2.25
TNIP3Q96KP6 Y_RNA.52-201ENST00000362760 96 ntBASIC0.98□□□□□ -2.25
TNIP3Q96KP6 RNU1-93P-201ENST00000364704 169 ntBASIC0.98□□□□□ -2.25
TNIP3Q96KP6 RNU6-1187P-201ENST00000364771 110 ntBASIC0.98□□□□□ -2.25
TNIP3Q96KP6 MIR563-201ENST00000385080 79 ntBASIC0.98□□□□□ -2.25
TNIP3Q96KP6 SNORD105-201ENST00000386910 85 ntBASIC0.98□□□□□ -2.25
TNIP3Q96KP6 RNU6-239P-201ENST00000390990 99 ntBASIC0.98□□□□□ -2.25
TNIP3Q96KP6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.98□□□□□ -2.25
TNIP3Q96KP6 RNU5E-9P-201ENST00000411164 104 ntBASIC0.98□□□□□ -2.25
TNIP3Q96KP6 PSMC1P5-201ENST00000512850 177 ntBASIC0.98□□□□□ -2.25
TNIP3Q96KP6 RNU6-977P-201ENST00000516411 103 ntBASIC0.98□□□□□ -2.25
TNIP3Q96KP6 Y_RNA.681-201ENST00000516445 113 ntBASIC0.98□□□□□ -2.25
TNIP3Q96KP6 AL590095.2-201ENST00000604136 117 ntBASIC0.98□□□□□ -2.25
TNIP3Q96KP6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.98□□□□□ -2.25
TNIP3Q96KP6 MIR6844-201ENST00000637122 62 ntBASIC0.98□□□□□ -2.25
TNIP3Q96KP6 Y_RNA.29-201ENST00000362570 113 ntBASIC0.97□□□□□ -2.25
TNIP3Q96KP6 RNU4-84P-201ENST00000364200 139 ntBASIC0.97□□□□□ -2.25
TNIP3Q96KP6 RNU6-1135P-201ENST00000411083 103 ntBASIC0.97□□□□□ -2.25
TNIP3Q96KP6 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
TNIP3Q96KP6 SNORA81.3-201ENST00000517283 198 ntBASIC0.97□□□□□ -2.25
TNIP3Q96KP6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.97□□□□□ -2.25
TNIP3Q96KP6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
TNIP3Q96KP6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TNIP3Q96KP6 AC023934.1-201ENST00000574529 2389 ntBASIC0.96□□□□□ -2.26
TNIP3Q96KP6 Y_RNA.115-201ENST00000363272 98 ntBASIC0.96□□□□□ -2.26
TNIP3Q96KP6 RNU6-818P-201ENST00000364837 108 ntBASIC0.96□□□□□ -2.26
TNIP3Q96KP6 SNORA75.5-201ENST00000391291 81 ntBASIC0.96□□□□□ -2.26
TNIP3Q96KP6 RNU6-394P-201ENST00000410735 107 ntBASIC0.96□□□□□ -2.26
TNIP3Q96KP6 Y_RNA.662-201ENST00000516028 97 ntBASIC0.96□□□□□ -2.26
TNIP3Q96KP6 RNA5SP395-201ENST00000516567 118 ntBASIC0.96□□□□□ -2.26
TNIP3Q96KP6 MIR5000-201ENST00000577717 103 ntBASIC0.96□□□□□ -2.26
TNIP3Q96KP6 MIR4676-201ENST00000583078 72 ntBASIC0.96□□□□□ -2.26
TNIP3Q96KP6 AC020891.4-201ENST00000605745 93 ntBASIC0.96□□□□□ -2.26
TNIP3Q96KP6 FTX_2.1-201ENST00000618816 94 ntBASIC0.96□□□□□ -2.26
TNIP3Q96KP6 MIR6841-201ENST00000637129 72 ntBASIC0.96□□□□□ -2.26
TNIP3Q96KP6 MIR6767-201ENST00000637302 66 ntBASIC0.96□□□□□ -2.26
TNIP3Q96KP6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
TNIP3Q96KP6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
TNIP3Q96KP6 SNORA22.1-201ENST00000362701 134 ntBASIC0.95□□□□□ -2.26
TNIP3Q96KP6 RNU4-16P-201ENST00000364737 141 ntBASIC0.95□□□□□ -2.26
TNIP3Q96KP6 MIR520F-201ENST00000384824 87 ntBASIC0.95□□□□□ -2.26
TNIP3Q96KP6 MTND5P15-201ENST00000434246 349 ntBASIC0.95□□□□□ -2.26
TNIP3Q96KP6 MIR3646-201ENST00000578301 84 ntBASIC0.95□□□□□ -2.26
TNIP3Q96KP6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.95□□□□□ -2.26
TNIP3Q96KP6 MIR30D-201ENST00000362283 70 ntBASIC0.94□□□□□ -2.26
TNIP3Q96KP6 RNY1P11-201ENST00000363759 113 ntBASIC0.94□□□□□ -2.26
TNIP3Q96KP6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
TNIP3Q96KP6 RNU6-1237P-201ENST00000384777 107 ntBASIC0.94□□□□□ -2.26
TNIP3Q96KP6 RNU6-588P-201ENST00000410281 105 ntBASIC0.94□□□□□ -2.26
TNIP3Q96KP6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.94□□□□□ -2.26
TNIP3Q96KP6 AC074198.2-201ENST00000508153 258 ntBASIC0.94□□□□□ -2.26
TNIP3Q96KP6 MIR4804-201ENST00000581683 73 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms