Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RETREG3Q86VR2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
RETREG3Q86VR2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RETREG3Q86VR2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.71□□□□□ -1.98
RETREG3Q86VR2 AL357312.1-201ENST00000603879 298 ntBASIC2.71□□□□□ -1.98
RETREG3Q86VR2 AL162274.2-201ENST00000614406 332 ntBASIC2.71□□□□□ -1.98
RETREG3Q86VR2 MIR6740-201ENST00000618268 113 ntBASIC2.71□□□□□ -1.98
RETREG3Q86VR2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.71□□□□□ -1.98
RETREG3Q86VR2 SNORA9.2-201ENST00000365361 133 ntBASIC2.7□□□□□ -1.98
RETREG3Q86VR2 RNU6-380P-201ENST00000410207 107 ntBASIC2.7□□□□□ -1.98
RETREG3Q86VR2 MIR4325-201ENST00000583049 90 ntBASIC2.7□□□□□ -1.98
RETREG3Q86VR2 AP000942.3-201ENST00000603702 160 ntBASIC2.7□□□□□ -1.98
RETREG3Q86VR2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
RETREG3Q86VR2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RETREG3Q86VR2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.69□□□□□ -1.98
RETREG3Q86VR2 SNORA25.3-201ENST00000363205 127 ntBASIC2.69□□□□□ -1.98
RETREG3Q86VR2 SUMO1P4-201ENST00000429430 302 ntBASIC2.69□□□□□ -1.98
RETREG3Q86VR2 SNORA9.3-201ENST00000516383 129 ntBASIC2.69□□□□□ -1.98
RETREG3Q86VR2 MIR3670-2-201ENST00000582974 65 ntBASIC2.69□□□□□ -1.98
RETREG3Q86VR2 MIR3605-201ENST00000583214 100 ntBASIC2.69□□□□□ -1.98
RETREG3Q86VR2 MIR4264-201ENST00000583520 66 ntBASIC2.69□□□□□ -1.98
RETREG3Q86VR2 MIR3670-1-201ENST00000584160 65 ntBASIC2.69□□□□□ -1.98
RETREG3Q86VR2 MIR3670-3-201ENST00000584855 65 ntBASIC2.69□□□□□ -1.98
RETREG3Q86VR2 MIR3670-4-201ENST00000612260 65 ntBASIC2.69□□□□□ -1.98
RETREG3Q86VR2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RETREG3Q86VR2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
RETREG3Q86VR2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RETREG3Q86VR2 RNU6-811P-201ENST00000384069 107 ntBASIC2.68□□□□□ -1.98
RETREG3Q86VR2 MIR1302-7-201ENST00000408841 72 ntBASIC2.68□□□□□ -1.98
RETREG3Q86VR2 RNU6-1165P-201ENST00000410119 107 ntBASIC2.68□□□□□ -1.98
RETREG3Q86VR2 AL161935.2-201ENST00000414627 60 ntBASIC2.68□□□□□ -1.98
RETREG3Q86VR2 JTBP1-201ENST00000441314 247 ntBASIC2.68□□□□□ -1.98
RETREG3Q86VR2 SCARNA13-201ENST00000516672 275 ntBASIC2.68□□□□□ -1.98
RETREG3Q86VR2 RNU6-557P-201ENST00000516842 110 ntBASIC2.68□□□□□ -1.98
RETREG3Q86VR2 MIR4536-1-201ENST00000583537 88 ntBASIC2.68□□□□□ -1.98
RETREG3Q86VR2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RETREG3Q86VR2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RETREG3Q86VR2 MIR30D-201ENST00000362283 70 ntBASIC2.67□□□□□ -1.98
RETREG3Q86VR2 MIR422A-201ENST00000362286 90 ntBASIC2.67□□□□□ -1.98
RETREG3Q86VR2 RNA5SP374-201ENST00000362939 125 ntBASIC2.67□□□□□ -1.98
RETREG3Q86VR2 SNORA71.1-201ENST00000364523 117 ntBASIC2.67□□□□□ -1.98
RETREG3Q86VR2 RNU1-52P-201ENST00000384190 164 ntBASIC2.67□□□□□ -1.98
RETREG3Q86VR2 MIR128-1-201ENST00000384921 82 ntBASIC2.67□□□□□ -1.98
RETREG3Q86VR2 RNU6-205P-201ENST00000390858 107 ntBASIC2.67□□□□□ -1.98
RETREG3Q86VR2 SNORA48.2-201ENST00000390926 124 ntBASIC2.67□□□□□ -1.98
RETREG3Q86VR2 Z98742.3-201ENST00000418637 326 ntBASIC2.67□□□□□ -1.98
RETREG3Q86VR2 RNU7-62P-201ENST00000458856 62 ntBASIC2.67□□□□□ -1.98
RETREG3Q86VR2 GTF3AP2-201ENST00000557014 266 ntBASIC2.67□□□□□ -1.98
RETREG3Q86VR2 AL161722.3-201ENST00000605789 2983 ntBASIC2.67□□□□□ -1.98
RETREG3Q86VR2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RETREG3Q86VR2 AC008163.1-202ENST00000636004 2889 ntBASIC2.66□□□□□ -1.98
RETREG3Q86VR2 SNORA63.2-201ENST00000362603 126 ntBASIC2.66□□□□□ -1.98
RETREG3Q86VR2 RNU6-686P-201ENST00000364839 107 ntBASIC2.66□□□□□ -1.98
RETREG3Q86VR2 MIR634-201ENST00000385208 97 ntBASIC2.66□□□□□ -1.98
RETREG3Q86VR2 RNU6-243P-201ENST00000391140 107 ntBASIC2.66□□□□□ -1.98
RETREG3Q86VR2 RNA5SP341-201ENST00000516261 117 ntBASIC2.66□□□□□ -1.98
RETREG3Q86VR2 MIR516A2-201ENST00000384888 90 ntBASIC2.65□□□□□ -1.99
RETREG3Q86VR2 MIR516A1-201ENST00000385033 90 ntBASIC2.65□□□□□ -1.99
RETREG3Q86VR2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.65□□□□□ -1.99
RETREG3Q86VR2 RNU6-1254P-201ENST00000391266 104 ntBASIC2.65□□□□□ -1.99
RETREG3Q86VR2 HSPE1P24-201ENST00000450782 238 ntBASIC2.65□□□□□ -1.99
RETREG3Q86VR2 AC005908.1-201ENST00000468701 347 ntBASIC2.65□□□□□ -1.99
RETREG3Q86VR2 AC004223.1-201ENST00000479840 271 ntBASIC2.65□□□□□ -1.99
RETREG3Q86VR2 MIR2115-201ENST00000516657 100 ntBASIC2.65□□□□□ -1.99
RETREG3Q86VR2 Y_RNA.788-201ENST00000622394 112 ntBASIC2.65□□□□□ -1.99
RETREG3Q86VR2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RETREG3Q86VR2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RETREG3Q86VR2 MIRLET7A1-201ENST00000362295 80 ntBASIC2.64□□□□□ -1.99
RETREG3Q86VR2 RNU6-161P-201ENST00000363051 106 ntBASIC2.64□□□□□ -1.99
RETREG3Q86VR2 SNORA25.9-201ENST00000365087 128 ntBASIC2.64□□□□□ -1.99
RETREG3Q86VR2 RNU2-19P-201ENST00000517288 84 ntBASIC2.64□□□□□ -1.99
RETREG3Q86VR2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.64□□□□□ -1.99
RETREG3Q86VR2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.64□□□□□ -1.99
RETREG3Q86VR2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
RETREG3Q86VR2 MIR26A1-201ENST00000362205 77 ntBASIC2.63□□□□□ -1.99
RETREG3Q86VR2 SNORD36A-201ENST00000362874 73 ntBASIC2.63□□□□□ -1.99
RETREG3Q86VR2 RNU6-439P-201ENST00000384188 106 ntBASIC2.63□□□□□ -1.99
RETREG3Q86VR2 MT-TF-201ENST00000387314 71 ntBASIC2.63□□□□□ -1.99
RETREG3Q86VR2 RNA5SP292-201ENST00000390974 118 ntBASIC2.63□□□□□ -1.99
RETREG3Q86VR2 FGF7P7-201ENST00000514120 227 ntBASIC2.63□□□□□ -1.99
RETREG3Q86VR2 RNU6-947P-201ENST00000516264 106 ntBASIC2.63□□□□□ -1.99
RETREG3Q86VR2 RNU6-1108P-201ENST00000516308 104 ntBASIC2.63□□□□□ -1.99
RETREG3Q86VR2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.63□□□□□ -1.99
RETREG3Q86VR2 AC121758.2-201ENST00000553271 193 ntBASIC2.63□□□□□ -1.99
RETREG3Q86VR2 MIR5194-201ENST00000582634 120 ntBASIC2.63□□□□□ -1.99
RETREG3Q86VR2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.63□□□□□ -1.99
RETREG3Q86VR2 GHRLOS.1-201ENST00000610995 70 ntBASIC2.63□□□□□ -1.99
RETREG3Q86VR2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
RETREG3Q86VR2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RETREG3Q86VR2 RNA5SP276-201ENST00000362580 94 ntBASIC2.62□□□□□ -1.99
RETREG3Q86VR2 MT-TN-201ENST00000387400 73 ntBASIC2.62□□□□□ -1.99
RETREG3Q86VR2 AC022018.1-201ENST00000430685 241 ntBASIC2.62□□□□□ -1.99
RETREG3Q86VR2 S100A11P2-201ENST00000467589 312 ntBASIC2.62□□□□□ -1.99
RETREG3Q86VR2 RN7SL274P-201ENST00000492268 272 ntBASIC2.62□□□□□ -1.99
RETREG3Q86VR2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.62□□□□□ -1.99
RETREG3Q86VR2 Y_RNA.660-201ENST00000516002 120 ntBASIC2.62□□□□□ -1.99
RETREG3Q86VR2 SNORA18.5-201ENST00000516616 101 ntBASIC2.62□□□□□ -1.99
RETREG3Q86VR2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RETREG3Q86VR2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RETREG3Q86VR2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms