Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RNU6-90P-201ENST00000606352 106 ntBASIC-3.63□□□□□ -2.99
TFF3Q07654 MIR342-201ENST00000362212 99 ntBASIC-3.64□□□□□ -2.99
TFF3Q07654 Y_RNA.27-201ENST00000362540 103 ntBASIC-3.64□□□□□ -2.99
TFF3Q07654 SNORD114-10-201ENST00000363409 72 ntBASIC-3.64□□□□□ -2.99
TFF3Q07654 RNU4-17P-201ENST00000365598 141 ntBASIC-3.64□□□□□ -2.99
TFF3Q07654 SNORA53-201ENST00000391141 249 ntBASIC-3.64□□□□□ -2.99
TFF3Q07654 Y_RNA.596-201ENST00000410462 109 ntBASIC-3.64□□□□□ -2.99
TFF3Q07654 AC009961.2-201ENST00000435771 251 ntBASIC-3.64□□□□□ -2.99
TFF3Q07654 Y_RNA.708-201ENST00000516950 96 ntBASIC-3.64□□□□□ -2.99
TFF3Q07654 MIR4500-201ENST00000579472 76 ntBASIC-3.64□□□□□ -2.99
TFF3Q07654 FAS-AS1.1-201ENST00000615327 126 ntBASIC-3.64□□□□□ -2.99
TFF3Q07654 Y_RNA.358-201ENST00000365491 99 ntBASIC-3.65□□□□□ -2.99
TFF3Q07654 RNU7-167P-201ENST00000459160 62 ntBASIC-3.65□□□□□ -2.99
TFF3Q07654 RNU6-1238P-201ENST00000517215 102 ntBASIC-3.65□□□□□ -2.99
TFF3Q07654 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-3.65□□□□□ -2.99
TFF3Q07654 AC064836.2-201ENST00000609491 462 ntBASIC-3.65□□□□□ -2.99
TFF3Q07654 RNU4-50P-201ENST00000364361 141 ntBASIC-3.66□□□□□ -3
TFF3Q07654 RNU6-1310P-201ENST00000384153 107 ntBASIC-3.66□□□□□ -3
TFF3Q07654 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.66□□□□□ -3
TFF3Q07654 RNU7-106P-201ENST00000459514 67 ntBASIC-3.66□□□□□ -3
TFF3Q07654 RNU6-1114P-201ENST00000516022 107 ntBASIC-3.66□□□□□ -3
TFF3Q07654 MIR4307-201ENST00000582802 84 ntBASIC-3.66□□□□□ -3
TFF3Q07654 RNU6-1283P-201ENST00000365314 105 ntBASIC-3.67□□□□□ -3
TFF3Q07654 MIR521-1-201ENST00000384902 87 ntBASIC-3.67□□□□□ -3
TFF3Q07654 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-3.67□□□□□ -3
TFF3Q07654 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.68□□□□□ -3
TFF3Q07654 RNU6-236P-201ENST00000363886 106 ntBASIC-3.68□□□□□ -3
TFF3Q07654 Y_RNA.372-201ENST00000365599 102 ntBASIC-3.68□□□□□ -3
TFF3Q07654 RNU6-723P-201ENST00000383973 107 ntBASIC-3.68□□□□□ -3
TFF3Q07654 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.68□□□□□ -3
TFF3Q07654 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-3.68□□□□□ -3
TFF3Q07654 USP9YP23-201ENST00000455085 407 ntBASIC-3.68□□□□□ -3
TFF3Q07654 AC006566.1-201ENST00000608943 513 ntBASIC-3.68□□□□□ -3
TFF3Q07654 RNU4-80P-201ENST00000363200 141 ntBASIC-3.69□□□□□ -3
TFF3Q07654 RNU6-1145P-201ENST00000384246 107 ntBASIC-3.69□□□□□ -3
TFF3Q07654 RNU6-606P-201ENST00000384721 111 ntBASIC-3.69□□□□□ -3
TFF3Q07654 Y_RNA.603-201ENST00000410571 108 ntBASIC-3.69□□□□□ -3
TFF3Q07654 MTND3P21-201ENST00000433774 331 ntBASIC-3.69□□□□□ -3
TFF3Q07654 RNU6-625P-201ENST00000459412 107 ntBASIC-3.69□□□□□ -3
TFF3Q07654 AC004467.1-201ENST00000615678 330 ntBASIC-3.69□□□□□ -3
TFF3Q07654 AC022140.2-201ENST00000623500 188 ntBASIC-3.69□□□□□ -3
TFF3Q07654 RNU4-24P-201ENST00000364565 139 ntBASIC-3.7□□□□□ -3
TFF3Q07654 SNORD19-201ENST00000391191 68 ntBASIC-3.7□□□□□ -3
TFF3Q07654 AL009048.1-201ENST00000450437 298 ntBASIC-3.7□□□□□ -3
TFF3Q07654 RNU6-893P-201ENST00000458841 100 ntBASIC-3.7□□□□□ -3
TFF3Q07654 RNU6-559P-201ENST00000516151 98 ntBASIC-3.7□□□□□ -3
TFF3Q07654 SNORD67.1-201ENST00000516618 108 ntBASIC-3.7□□□□□ -3
TFF3Q07654 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-3.7□□□□□ -3
TFF3Q07654 uc_338.11-201ENST00000619132 160 ntBASIC-3.7□□□□□ -3
TFF3Q07654 U6.96-201ENST00000636425 70 ntBASIC-3.7□□□□□ -3
TFF3Q07654 RNU7-115P-201ENST00000516433 55 ntBASIC-3.71□□□□□ -3
TFF3Q07654 MIR16-2-201ENST00000362117 81 ntBASIC-3.72□□□□□ -3
TFF3Q07654 RNU6-774P-201ENST00000363238 107 ntBASIC-3.72□□□□□ -3
TFF3Q07654 RNU6-987P-201ENST00000384759 104 ntBASIC-3.72□□□□□ -3
TFF3Q07654 RPS3AP52-201ENST00000435639 297 ntBASIC-3.72□□□□□ -3
TFF3Q07654 FTX_4.1-201ENST00000616291 147 ntBASIC-3.72□□□□□ -3
TFF3Q07654 AC012531.4-201ENST00000616509 177 ntBASIC-3.72□□□□□ -3
TFF3Q07654 SNORD116-9-201ENST00000384000 95 ntBASIC-3.73□□□□□ -3.01
TFF3Q07654 SNORD116-3-201ENST00000384287 95 ntBASIC-3.73□□□□□ -3.01
TFF3Q07654 SNORD116-8-201ENST00000384365 95 ntBASIC-3.73□□□□□ -3.01
TFF3Q07654 SNORD116-7-201ENST00000384404 95 ntBASIC-3.73□□□□□ -3.01
TFF3Q07654 SNORD116-5-201ENST00000384462 95 ntBASIC-3.73□□□□□ -3.01
TFF3Q07654 MIR513C-201ENST00000401352 84 ntBASIC-3.73□□□□□ -3.01
TFF3Q07654 RNU6-101P-201ENST00000410323 104 ntBASIC-3.73□□□□□ -3.01
TFF3Q07654 AL590623.1-201ENST00000427864 105 ntBASIC-3.73□□□□□ -3.01
TFF3Q07654 RNU6-693P-201ENST00000516134 107 ntBASIC-3.73□□□□□ -3.01
TFF3Q07654 AC090617.8-201ENST00000623339 167 ntBASIC-3.73□□□□□ -3.01
TFF3Q07654 AC021613.1-201ENST00000623880 111 ntBASIC-3.73□□□□□ -3.01
TFF3Q07654 U6.100-201ENST00000636230 99 ntBASIC-3.73□□□□□ -3.01
TFF3Q07654 Y_RNA.153-201ENST00000363615 91 ntBASIC-3.74□□□□□ -3.01
TFF3Q07654 MIR1278-201ENST00000408753 81 ntBASIC-3.74□□□□□ -3.01
TFF3Q07654 MTND3P16-201ENST00000452205 344 ntBASIC-3.74□□□□□ -3.01
TFF3Q07654 SNORD42B-201ENST00000458893 67 ntBASIC-3.74□□□□□ -3.01
TFF3Q07654 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-3.74□□□□□ -3.01
TFF3Q07654 MIR23C-201ENST00000579846 100 ntBASIC-3.74□□□□□ -3.01
TFF3Q07654 AC018638.8-201ENST00000588755 281 ntBASIC-3.74□□□□□ -3.01
TFF3Q07654 TRDV1-202ENST00000621643 102 ntBASIC-3.74□□□□□ -3.01
TFF3Q07654 RNU6-647P-201ENST00000364243 107 ntBASIC-3.75□□□□□ -3.01
TFF3Q07654 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.75□□□□□ -3.01
TFF3Q07654 Y_RNA.351-201ENST00000365436 96 ntBASIC-3.75□□□□□ -3.01
TFF3Q07654 RNU6-1329P-201ENST00000365664 107 ntBASIC-3.75□□□□□ -3.01
TFF3Q07654 Y_RNA.454-201ENST00000384224 113 ntBASIC-3.75□□□□□ -3.01
TFF3Q07654 AL606923.1-201ENST00000406616 190 ntBASIC-3.75□□□□□ -3.01
TFF3Q07654 RNU2-66P-201ENST00000410650 161 ntBASIC-3.75□□□□□ -3.01
TFF3Q07654 AC113618.1-201ENST00000416747 285 ntBASIC-3.75□□□□□ -3.01
TFF3Q07654 MTND2P3-201ENST00000452458 470 ntBASIC-3.75□□□□□ -3.01
TFF3Q07654 RNU7-80P-201ENST00000459562 61 ntBASIC-3.75□□□□□ -3.01
TFF3Q07654 RNU7-149P-201ENST00000516739 59 ntBASIC-3.75□□□□□ -3.01
TFF3Q07654 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.75□□□□□ -3.01
TFF3Q07654 RNU6-792P-201ENST00000363490 107 ntBASIC-3.76□□□□□ -3.01
TFF3Q07654 MIR509-1-201ENST00000385265 94 ntBASIC-3.76□□□□□ -3.01
TFF3Q07654 MIR509-2-201ENST00000390724 91 ntBASIC-3.76□□□□□ -3.01
TFF3Q07654 MTATP6P24-201ENST00000576835 677 ntBASIC-3.76□□□□□ -3.01
TFF3Q07654 MIR4775-201ENST00000581168 75 ntBASIC-3.76□□□□□ -3.01
TFF3Q07654 AC107399.1-201ENST00000451226 265 ntBASIC-3.77□□□□□ -3.01
TFF3Q07654 snoU109.3-201ENST00000459477 145 ntBASIC-3.77□□□□□ -3.01
TFF3Q07654 Y_RNA.631-201ENST00000459607 101 ntBASIC-3.77□□□□□ -3.01
TFF3Q07654 MTND3P7-201ENST00000474435 343 ntBASIC-3.77□□□□□ -3.01
TFF3Q07654 RNU6-1057P-201ENST00000517162 102 ntBASIC-3.77□□□□□ -3.01
TFF3Q07654 MTATP6P15-201ENST00000527233 835 ntBASIC-3.77□□□□□ -3.01
Retrieved 100 of 98,524 protein–RNA pairs in 278.9 ms