Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 SNORA31.17-201ENST00000516953 127 ntBASIC2.18□□□□□ -2.06
RTP1P59025 FAM71BP1-201ENST00000604431 523 ntBASIC2.18□□□□□ -2.06
RTP1P59025 RNA5SP160-201ENST00000364866 120 ntBASIC2.17□□□□□ -2.06
RTP1P59025 SNORA25.9-201ENST00000365087 128 ntBASIC2.17□□□□□ -2.06
RTP1P59025 SNORA26.2-201ENST00000390922 122 ntBASIC2.17□□□□□ -2.06
RTP1P59025 RNU6-679P-201ENST00000391003 106 ntBASIC2.17□□□□□ -2.06
RTP1P59025 SNORA7.5-201ENST00000410672 110 ntBASIC2.17□□□□□ -2.06
RTP1P59025 HMGN1P33-201ENST00000432945 451 ntBASIC2.17□□□□□ -2.06
RTP1P59025 RPL23AP6-201ENST00000446637 472 ntBASIC2.17□□□□□ -2.06
RTP1P59025 RNU7-193P-201ENST00000516723 65 ntBASIC2.17□□□□□ -2.06
RTP1P59025 SNORA74.3-201ENST00000517108 154 ntBASIC2.17□□□□□ -2.06
RTP1P59025 MIR4529-201ENST00000578110 78 ntBASIC2.17□□□□□ -2.06
RTP1P59025 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.17□□□□□ -2.06
RTP1P59025 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.17□□□□□ -2.06
RTP1P59025 SNORD77B-201ENST00000391112 67 ntBASIC2.16□□□□□ -2.06
RTP1P59025 RNU4-62P-201ENST00000410125 130 ntBASIC2.16□□□□□ -2.06
RTP1P59025 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
RTP1P59025 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
RTP1P59025 Y_RNA.10-201ENST00000362371 110 ntBASIC2.15□□□□□ -2.07
RTP1P59025 RNU6-360P-201ENST00000390944 104 ntBASIC2.15□□□□□ -2.07
RTP1P59025 AP1B1P2-201ENST00000416196 106 ntBASIC2.15□□□□□ -2.07
RTP1P59025 SNRPGP19-201ENST00000603826 189 ntBASIC2.15□□□□□ -2.07
RTP1P59025 MIR8055-201ENST00000610739 97 ntBASIC2.15□□□□□ -2.07
RTP1P59025 AC012531.4-201ENST00000616509 177 ntBASIC2.15□□□□□ -2.07
RTP1P59025 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RTP1P59025 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.15□□□□□ -2.07
RTP1P59025 RNU6-203P-201ENST00000384038 104 ntBASIC2.14□□□□□ -2.07
RTP1P59025 SNORA32-201ENST00000384072 121 ntBASIC2.14□□□□□ -2.07
RTP1P59025 RNU6-1067P-201ENST00000384752 107 ntBASIC2.14□□□□□ -2.07
RTP1P59025 MIR489-201ENST00000384923 84 ntBASIC2.14□□□□□ -2.07
RTP1P59025 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RTP1P59025 snoU13.16-201ENST00000459350 104 ntBASIC2.14□□□□□ -2.07
RTP1P59025 RNU6-917P-201ENST00000516294 104 ntBASIC2.14□□□□□ -2.07
RTP1P59025 RNU6-795P-201ENST00000516323 103 ntBASIC2.14□□□□□ -2.07
RTP1P59025 RNU6-521P-201ENST00000516663 105 ntBASIC2.14□□□□□ -2.07
RTP1P59025 RNU2-19P-201ENST00000517288 84 ntBASIC2.14□□□□□ -2.07
RTP1P59025 AC062037.1-201ENST00000605302 128 ntBASIC2.14□□□□□ -2.07
RTP1P59025 AC084768.2-201ENST00000622736 221 ntBASIC2.14□□□□□ -2.07
RTP1P59025 RNU6-170P-201ENST00000362832 104 ntBASIC2.13□□□□□ -2.07
RTP1P59025 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.13□□□□□ -2.07
RTP1P59025 MIR548Z-201ENST00000584743 97 ntBASIC2.13□□□□□ -2.07
RTP1P59025 MIR8081-201ENST00000611533 95 ntBASIC2.13□□□□□ -2.07
RTP1P59025 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
RTP1P59025 Y_RNA.290-201ENST00000364879 114 ntBASIC2.12□□□□□ -2.07
RTP1P59025 MIR518E-201ENST00000385252 88 ntBASIC2.12□□□□□ -2.07
RTP1P59025 RNU6-644P-201ENST00000391155 98 ntBASIC2.12□□□□□ -2.07
RTP1P59025 AC004941.2-201ENST00000427009 228 ntBASIC2.12□□□□□ -2.07
RTP1P59025 AC055731.1-201ENST00000474387 401 ntBASIC2.12□□□□□ -2.07
RTP1P59025 RNU7-61P-201ENST00000515897 61 ntBASIC2.12□□□□□ -2.07
RTP1P59025 RNU7-43P-201ENST00000516554 64 ntBASIC2.12□□□□□ -2.07
RTP1P59025 RNA5SP364-201ENST00000516938 78 ntBASIC2.12□□□□□ -2.07
RTP1P59025 MIR4764-201ENST00000580680 88 ntBASIC2.12□□□□□ -2.07
RTP1P59025 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.12□□□□□ -2.07
RTP1P59025 uc_338.20-201ENST00000621563 178 ntBASIC2.12□□□□□ -2.07
RTP1P59025 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.12□□□□□ -2.07
RTP1P59025 RNU6-1123P-201ENST00000362347 106 ntBASIC2.11□□□□□ -2.07
RTP1P59025 SNORA1.1-201ENST00000364671 133 ntBASIC2.11□□□□□ -2.07
RTP1P59025 RNU6-1201P-201ENST00000384227 107 ntBASIC2.11□□□□□ -2.07
RTP1P59025 MIR194-1-201ENST00000384892 85 ntBASIC2.11□□□□□ -2.07
RTP1P59025 AC096949.1-201ENST00000412047 152 ntBASIC2.11□□□□□ -2.07
RTP1P59025 RNU6-1018P-201ENST00000516577 106 ntBASIC2.11□□□□□ -2.07
RTP1P59025 AC026421.1-201ENST00000519101 163 ntBASIC2.11□□□□□ -2.07
RTP1P59025 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.11□□□□□ -2.07
RTP1P59025 AC008133.2-201ENST00000624540 351 ntBASIC2.11□□□□□ -2.07
RTP1P59025 AC091304.10-201ENST00000641554 121 ntBASIC2.11□□□□□ -2.07
RTP1P59025 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.11□□□□□ -2.07
RTP1P59025 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RTP1P59025 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.1□□□□□ -2.07
RTP1P59025 Y_RNA.377-201ENST00000365644 108 ntBASIC2.1□□□□□ -2.07
RTP1P59025 RNU6-342P-201ENST00000384521 104 ntBASIC2.1□□□□□ -2.07
RTP1P59025 MIR9-3-201ENST00000385084 90 ntBASIC2.1□□□□□ -2.07
RTP1P59025 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.1□□□□□ -2.07
RTP1P59025 AC024614.2-201ENST00000577584 372 ntBASIC2.1□□□□□ -2.07
RTP1P59025 MIR4777-201ENST00000583710 86 ntBASIC2.1□□□□□ -2.07
RTP1P59025 MIR8065-201ENST00000620577 100 ntBASIC2.1□□□□□ -2.07
RTP1P59025 Z97988.1-201ENST00000637697 135 ntBASIC2.1□□□□□ -2.07
RTP1P59025 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
RTP1P59025 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.07
RTP1P59025 AC004965.1-201ENST00000413033 213 ntBASIC2.09□□□□□ -2.07
RTP1P59025 AC245047.7-201ENST00000440265 293 ntBASIC2.09□□□□□ -2.07
RTP1P59025 MIR4303-201ENST00000581299 66 ntBASIC2.09□□□□□ -2.07
RTP1P59025 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RTP1P59025 AP000648.3-201ENST00000623539 4507 ntBASIC2.08□□□□□ -2.08
RTP1P59025 RNU6-1313P-201ENST00000362622 102 ntBASIC2.08□□□□□ -2.08
RTP1P59025 SNORD45B-201ENST00000364617 72 ntBASIC2.08□□□□□ -2.08
RTP1P59025 RNU6-60P-201ENST00000364792 103 ntBASIC2.08□□□□□ -2.08
RTP1P59025 SNORD115-35-201ENST00000365122 82 ntBASIC2.08□□□□□ -2.08
RTP1P59025 SNORA18-201ENST00000384416 132 ntBASIC2.08□□□□□ -2.08
RTP1P59025 MIR520C-201ENST00000385005 87 ntBASIC2.08□□□□□ -2.08
RTP1P59025 MIR653-201ENST00000385279 96 ntBASIC2.08□□□□□ -2.08
RTP1P59025 RNA5SP233-201ENST00000459153 113 ntBASIC2.08□□□□□ -2.08
RTP1P59025 RNU6-250P-201ENST00000516958 103 ntBASIC2.08□□□□□ -2.08
RTP1P59025 MIR3935-201ENST00000583472 104 ntBASIC2.08□□□□□ -2.08
RTP1P59025 AL512310.12-203ENST00000640543 90 ntBASIC2.08□□□□□ -2.08
RTP1P59025 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
RTP1P59025 RNU6-1134P-201ENST00000365156 101 ntBASIC2.07□□□□□ -2.08
RTP1P59025 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
RTP1P59025 MIR450A2-201ENST00000385022 100 ntBASIC2.07□□□□□ -2.08
RTP1P59025 RNU6-602P-201ENST00000411155 105 ntBASIC2.07□□□□□ -2.08
RTP1P59025 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 262 ms