Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RNU6-733P-201ENST00000410759 104 ntBASIC2.01□□□□□ -2.09
CCNFP41002 RNU2-40P-201ENST00000410833 196 ntBASIC2.01□□□□□ -2.09
CCNFP41002 RPL39P39-201ENST00000455840 151 ntBASIC2.01□□□□□ -2.09
CCNFP41002 MIR1270-201ENST00000459320 83 ntBASIC2.01□□□□□ -2.09
CCNFP41002 AC008834.1-201ENST00000511612 175 ntBASIC2.01□□□□□ -2.09
CCNFP41002 RNA5SP445-201ENST00000515889 115 ntBASIC2.01□□□□□ -2.09
CCNFP41002 RNU6-109P-201ENST00000516364 107 ntBASIC2.01□□□□□ -2.09
CCNFP41002 RNU6-184P-201ENST00000516514 107 ntBASIC2.01□□□□□ -2.09
CCNFP41002 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.01□□□□□ -2.09
CCNFP41002 FAM71BP1-201ENST00000604431 523 ntBASIC2.01□□□□□ -2.09
CCNFP41002 AC012493.3-201ENST00000604494 112 ntBASIC2.01□□□□□ -2.09
CCNFP41002 MIR8065-201ENST00000620577 100 ntBASIC2.01□□□□□ -2.09
CCNFP41002 ZNF355P-201ENST00000427301 3216 ntBASIC2.01□□□□□ -2.09
CCNFP41002 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCNFP41002 AL161722.3-201ENST00000605789 2983 ntBASIC2.01□□□□□ -2.09
CCNFP41002 MIR302D-201ENST00000362275 68 ntBASIC2□□□□□ -2.09
CCNFP41002 SNORD114-1-201ENST00000362705 72 ntBASIC2□□□□□ -2.09
CCNFP41002 SNORD1A-201ENST00000364968 72 ntBASIC2□□□□□ -2.09
CCNFP41002 SNORA64-201ENST00000384674 134 ntBASIC2□□□□□ -2.09
CCNFP41002 SUMO2P12-201ENST00000405924 140 ntBASIC2□□□□□ -2.09
CCNFP41002 RNU6-1086P-201ENST00000410930 100 ntBASIC2□□□□□ -2.09
CCNFP41002 AL603825.1-201ENST00000438481 80 ntBASIC2□□□□□ -2.09
CCNFP41002 AC079140.2-201ENST00000506193 142 ntBASIC2□□□□□ -2.09
CCNFP41002 MIR3937-201ENST00000580135 106 ntBASIC2□□□□□ -2.09
CCNFP41002 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
CCNFP41002 RNU6-363P-201ENST00000362895 105 ntBASIC1.99□□□□□ -2.09
CCNFP41002 MIR605-201ENST00000385078 83 ntBASIC1.99□□□□□ -2.09
CCNFP41002 RNU6-548P-201ENST00000517083 115 ntBASIC1.99□□□□□ -2.09
CCNFP41002 DEFB131E-201ENST00000532329 154 ntBASIC1.99□□□□□ -2.09
CCNFP41002 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.99□□□□□ -2.09
CCNFP41002 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CCNFP41002 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.98□□□□□ -2.09
CCNFP41002 RNU4-36P-201ENST00000364294 144 ntBASIC1.98□□□□□ -2.09
CCNFP41002 RNA5SP237-201ENST00000410414 113 ntBASIC1.98□□□□□ -2.09
CCNFP41002 RNU6-521P-201ENST00000516663 105 ntBASIC1.98□□□□□ -2.09
CCNFP41002 MIR5089-201ENST00000580047 84 ntBASIC1.98□□□□□ -2.09
CCNFP41002 SNRPGP19-201ENST00000603826 189 ntBASIC1.98□□□□□ -2.09
CCNFP41002 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
CCNFP41002 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CCNFP41002 RNU1-78P-201ENST00000391248 165 ntBASIC1.97□□□□□ -2.09
CCNFP41002 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.97□□□□□ -2.09
CCNFP41002 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.97□□□□□ -2.09
CCNFP41002 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.97□□□□□ -2.09
CCNFP41002 AP001318.4-201ENST00000616637 121 ntBASIC1.97□□□□□ -2.09
CCNFP41002 AL512310.12-203ENST00000640543 90 ntBASIC1.97□□□□□ -2.09
CCNFP41002 Y_RNA.360-201ENST00000365512 102 ntBASIC1.96□□□□□ -2.1
CCNFP41002 RNU6-1065P-201ENST00000384513 106 ntBASIC1.96□□□□□ -2.1
CCNFP41002 Y_RNA.544-201ENST00000384650 113 ntBASIC1.96□□□□□ -2.1
CCNFP41002 MIR934-201ENST00000401241 83 ntBASIC1.96□□□□□ -2.1
CCNFP41002 MIR1289-2-201ENST00000408360 111 ntBASIC1.96□□□□□ -2.1
CCNFP41002 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCNFP41002 AC027119.1-201ENST00000440877 241 ntBASIC1.96□□□□□ -2.1
CCNFP41002 RNA5SP458-201ENST00000516188 119 ntBASIC1.96□□□□□ -2.1
CCNFP41002 SNORA40.13-201ENST00000516379 120 ntBASIC1.96□□□□□ -2.1
CCNFP41002 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.96□□□□□ -2.1
CCNFP41002 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CCNFP41002 RNY3P2-201ENST00000362918 102 ntBASIC1.95□□□□□ -2.1
CCNFP41002 RNU6-1255P-201ENST00000363434 112 ntBASIC1.95□□□□□ -2.1
CCNFP41002 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.95□□□□□ -2.1
CCNFP41002 RNU7-79P-201ENST00000516082 62 ntBASIC1.95□□□□□ -2.1
CCNFP41002 RNU6-970P-201ENST00000516312 107 ntBASIC1.95□□□□□ -2.1
CCNFP41002 RNU6-250P-201ENST00000516958 103 ntBASIC1.95□□□□□ -2.1
CCNFP41002 MIR4422-201ENST00000581938 83 ntBASIC1.95□□□□□ -2.1
CCNFP41002 PRELID3BP2-201ENST00000605362 201 ntBASIC1.95□□□□□ -2.1
CCNFP41002 Y_RNA.783-201ENST00000613546 102 ntBASIC1.95□□□□□ -2.1
CCNFP41002 AL353997.5-201ENST00000618886 171 ntBASIC1.95□□□□□ -2.1
CCNFP41002 Y_RNA.43-201ENST00000362670 111 ntBASIC1.94□□□□□ -2.1
CCNFP41002 Y_RNA.348-201ENST00000365403 103 ntBASIC1.94□□□□□ -2.1
CCNFP41002 MIR764-201ENST00000390811 85 ntBASIC1.94□□□□□ -2.1
CCNFP41002 RNU6-679P-201ENST00000391003 106 ntBASIC1.94□□□□□ -2.1
CCNFP41002 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.94□□□□□ -2.1
CCNFP41002 RNU6-904P-201ENST00000516206 101 ntBASIC1.94□□□□□ -2.1
CCNFP41002 Y_RNA.694-201ENST00000516677 117 ntBASIC1.94□□□□□ -2.1
CCNFP41002 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCNFP41002 Y_RNA.78-201ENST00000362970 110 ntBASIC1.93□□□□□ -2.1
CCNFP41002 RNU6-1099P-201ENST00000363533 107 ntBASIC1.93□□□□□ -2.1
CCNFP41002 RNU6-396P-201ENST00000365369 105 ntBASIC1.93□□□□□ -2.1
CCNFP41002 RNU6-905P-201ENST00000384434 107 ntBASIC1.93□□□□□ -2.1
CCNFP41002 MIR577-201ENST00000385196 96 ntBASIC1.93□□□□□ -2.1
CCNFP41002 SNORD67.1-201ENST00000516618 108 ntBASIC1.93□□□□□ -2.1
CCNFP41002 RNU7-35P-201ENST00000517174 62 ntBASIC1.93□□□□□ -2.1
CCNFP41002 AC105081.1-201ENST00000617727 106 ntBASIC1.93□□□□□ -2.1
CCNFP41002 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCNFP41002 SNORD115-35-201ENST00000365122 82 ntBASIC1.92□□□□□ -2.1
CCNFP41002 MIR206-201ENST00000384872 86 ntBASIC1.92□□□□□ -2.1
CCNFP41002 RNU6-205P-201ENST00000390858 107 ntBASIC1.92□□□□□ -2.1
CCNFP41002 AC245517.4-201ENST00000448601 281 ntBASIC1.92□□□□□ -2.1
CCNFP41002 RNU7-2P-201ENST00000516096 62 ntBASIC1.92□□□□□ -2.1
CCNFP41002 MIR4694-201ENST00000578534 80 ntBASIC1.92□□□□□ -2.1
CCNFP41002 MIR5582-201ENST00000579697 68 ntBASIC1.92□□□□□ -2.1
CCNFP41002 AP000942.3-201ENST00000603702 160 ntBASIC1.92□□□□□ -2.1
CCNFP41002 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCNFP41002 RNU6-832P-201ENST00000363319 107 ntBASIC1.91□□□□□ -2.1
CCNFP41002 MIR588-201ENST00000384900 83 ntBASIC1.91□□□□□ -2.1
CCNFP41002 AC244023.1-201ENST00000426884 112 ntBASIC1.91□□□□□ -2.1
CCNFP41002 snoU13.25-201ENST00000458945 104 ntBASIC1.91□□□□□ -2.1
CCNFP41002 RPL30P7-201ENST00000479312 323 ntBASIC1.91□□□□□ -2.1
CCNFP41002 SCARNA23-201ENST00000516060 130 ntBASIC1.91□□□□□ -2.1
CCNFP41002 AP000753.3-201ENST00000604083 169 ntBASIC1.91□□□□□ -2.1
CCNFP41002 AC242498.1-201ENST00000604134 111 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms