Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 7SK.13-201ENST00000622040 250 ntBASIC1.38□□□□□ -2.19
HOXC13P31276 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
HOXC13P31276 SNORA1B-201ENST00000362535 133 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 RNA5SP325-201ENST00000363756 130 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 Y_RNA.198-201ENST00000364013 98 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 Y_RNA.323-201ENST00000365157 109 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 RNU6-1113P-201ENST00000384348 107 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 RNU6-1104P-201ENST00000384723 104 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 MIR522-201ENST00000385071 87 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 U8.17-201ENST00000391292 132 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.37□□□□□ -2.19
HOXC13P31276 STAG3L5P-204ENST00000443759 179 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 RNU7-25P-201ENST00000516544 62 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 SNORD36C-201ENST00000516733 66 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 AC141557.1-201ENST00000540982 400 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 MIR3664-201ENST00000579074 99 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.37□□□□□ -2.19
HOXC13P31276 MIR5197-201ENST00000583721 112 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 AC021443.1-201ENST00000604478 211 ntBASIC1.37□□□□□ -2.19
HOXC13P31276 RNU6-1084P-201ENST00000362498 107 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 RNY4P6-201ENST00000363667 96 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 Y_RNA.344-201ENST00000365381 112 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 RNU6-1189P-201ENST00000383958 107 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 MIR759-201ENST00000390224 91 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
HOXC13P31276 RPS26P48-201ENST00000491713 339 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 RNA5SP220-201ENST00000516298 104 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 RNU7-28P-201ENST00000516759 62 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 RNU7-70P-201ENST00000516941 66 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 RNU6-341P-201ENST00000516973 96 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 AC068339.1-201ENST00000526965 141 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 AC022523.2-201ENST00000561045 150 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 MIR5009-201ENST00000578736 100 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 HSPE1P19-201ENST00000603327 295 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 AC062037.1-201ENST00000605302 128 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 RNU6-94P-201ENST00000607728 107 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.36□□□□□ -2.19
HOXC13P31276 AC134878.1-201ENST00000619901 243 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 PVT1_3.1-201ENST00000620853 95 ntBASIC1.36□□□□□ -2.19
HOXC13P31276 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HOXC13P31276 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HOXC13P31276 MIR342-201ENST00000362212 99 ntBASIC1.35□□□□□ -2.19
HOXC13P31276 RNU6-349P-201ENST00000362402 107 ntBASIC1.35□□□□□ -2.19
HOXC13P31276 SNORD14E-201ENST00000364009 85 ntBASIC1.35□□□□□ -2.19
HOXC13P31276 Y_RNA.213-201ENST00000364178 111 ntBASIC1.35□□□□□ -2.19
HOXC13P31276 RNA5SP173-201ENST00000364857 136 ntBASIC1.35□□□□□ -2.19
HOXC13P31276 RNU6-573P-201ENST00000383938 106 ntBASIC1.35□□□□□ -2.19
HOXC13P31276 Y_RNA.544-201ENST00000384650 113 ntBASIC1.35□□□□□ -2.19
HOXC13P31276 Y_RNA.547-201ENST00000384654 119 ntBASIC1.35□□□□□ -2.19
HOXC13P31276 Y_RNA.558-201ENST00000384685 113 ntBASIC1.35□□□□□ -2.19
HOXC13P31276 MIR660-201ENST00000385235 97 ntBASIC1.35□□□□□ -2.19
HOXC13P31276 SNORA40.6-201ENST00000391153 128 ntBASIC1.35□□□□□ -2.19
HOXC13P31276 RNU7-164P-201ENST00000459221 62 ntBASIC1.35□□□□□ -2.19
HOXC13P31276 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.35□□□□□ -2.19
HOXC13P31276 Y_RNA.714-201ENST00000517065 90 ntBASIC1.35□□□□□ -2.19
HOXC13P31276 Y_RNA.37-201ENST00000362606 108 ntBASIC1.34□□□□□ -2.19
HOXC13P31276 SNORD115-28-201ENST00000363931 81 ntBASIC1.34□□□□□ -2.19
HOXC13P31276 RNU6-268P-201ENST00000364174 107 ntBASIC1.34□□□□□ -2.19
HOXC13P31276 RNU1-133P-201ENST00000364867 167 ntBASIC1.34□□□□□ -2.19
HOXC13P31276 Y_RNA.298-201ENST00000364960 107 ntBASIC1.34□□□□□ -2.19
HOXC13P31276 Y_RNA.351-201ENST00000365436 96 ntBASIC1.34□□□□□ -2.19
HOXC13P31276 Y_RNA.410-201ENST00000383992 113 ntBASIC1.34□□□□□ -2.19
HOXC13P31276 RPS3AP1-201ENST00000413190 320 ntBASIC1.34□□□□□ -2.19
HOXC13P31276 AP002004.2-201ENST00000531656 154 ntBASIC1.34□□□□□ -2.19
HOXC13P31276 AC087685.1-201ENST00000587507 141 ntBASIC1.34□□□□□ -2.19
HOXC13P31276 AL513534.2-201ENST00000603836 250 ntBASIC1.34□□□□□ -2.19
HOXC13P31276 MIR6078-201ENST00000611069 100 ntBASIC1.34□□□□□ -2.19
HOXC13P31276 MIR6779-201ENST00000617283 64 ntBASIC1.34□□□□□ -2.19
HOXC13P31276 Y_RNA.220-201ENST00000364244 109 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 RNU4-16P-201ENST00000364737 141 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 Y_RNA.354-201ENST00000365448 111 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 RNU6-442P-201ENST00000383968 104 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 MIR548D2-201ENST00000384955 97 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 RNU6-938P-201ENST00000411285 103 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 MTATP8P2-201ENST00000435212 202 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 RNU7-123P-201ENST00000515911 60 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 RNU7-6P-201ENST00000516845 62 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 SNORA18.7-201ENST00000516910 131 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 AL358944.1-201ENST00000528537 144 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 AC006441.5-201ENST00000612680 209 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 AL442128.1-201ENST00000615151 90 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 MIR6515-201ENST00000619843 57 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 AC015726.2-201ENST00000620112 122 ntBASIC1.33□□□□□ -2.2
HOXC13P31276 RNA5SP327-201ENST00000362494 101 ntBASIC1.32□□□□□ -2.2
HOXC13P31276 Y_RNA.242-201ENST00000364473 110 ntBASIC1.32□□□□□ -2.2
HOXC13P31276 snoU2-30.1-201ENST00000365012 70 ntBASIC1.32□□□□□ -2.2
HOXC13P31276 Y_RNA.440-201ENST00000384120 114 ntBASIC1.32□□□□□ -2.2
HOXC13P31276 RNY1P6-201ENST00000384193 109 ntBASIC1.32□□□□□ -2.2
HOXC13P31276 RNU6-592P-201ENST00000411333 103 ntBASIC1.32□□□□□ -2.2
HOXC13P31276 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.32□□□□□ -2.2
HOXC13P31276 SNRPGP14-201ENST00000435400 219 ntBASIC1.32□□□□□ -2.2
HOXC13P31276 RPL39P25-201ENST00000449384 154 ntBASIC1.32□□□□□ -2.2
HOXC13P31276 RNU2-35P-201ENST00000516446 142 ntBASIC1.32□□□□□ -2.2
HOXC13P31276 SNORD45.4-201ENST00000516629 73 ntBASIC1.32□□□□□ -2.2
HOXC13P31276 RNA5SP168-201ENST00000516642 112 ntBASIC1.32□□□□□ -2.2
HOXC13P31276 AP003484.1-201ENST00000530974 250 ntBASIC1.32□□□□□ -2.2
HOXC13P31276 MIR4305-201ENST00000583252 102 ntBASIC1.32□□□□□ -2.2
HOXC13P31276 MIR1245B-201ENST00000636115 69 ntBASIC1.32□□□□□ -2.2
HOXC13P31276 MIR494-201ENST00000349529 81 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms