Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
GDF1P27539 MIR302B-201ENST00000362188 73 ntBASIC0.64□□□□□ -2.31
GDF1P27539 RNU6-508P-201ENST00000363231 103 ntBASIC0.64□□□□□ -2.31
GDF1P27539 SNORA25.7-201ENST00000364375 127 ntBASIC0.64□□□□□ -2.31
GDF1P27539 Y_RNA.240-201ENST00000364469 95 ntBASIC0.64□□□□□ -2.31
GDF1P27539 Y_RNA.430-201ENST00000384081 110 ntBASIC0.64□□□□□ -2.31
GDF1P27539 Y_RNA.521-201ENST00000384560 114 ntBASIC0.64□□□□□ -2.31
GDF1P27539 MIR588-201ENST00000384900 83 ntBASIC0.64□□□□□ -2.31
GDF1P27539 RNU6-1319P-201ENST00000390855 104 ntBASIC0.64□□□□□ -2.31
GDF1P27539 RNU6-747P-201ENST00000390928 104 ntBASIC0.64□□□□□ -2.31
GDF1P27539 RNU6-241P-201ENST00000391148 104 ntBASIC0.64□□□□□ -2.31
GDF1P27539 RNU6-177P-201ENST00000411257 104 ntBASIC0.64□□□□□ -2.31
GDF1P27539 snoU13.2-201ENST00000459201 104 ntBASIC0.64□□□□□ -2.31
GDF1P27539 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.64□□□□□ -2.31
GDF1P27539 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.64□□□□□ -2.31
GDF1P27539 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
GDF1P27539 Y_RNA.52-201ENST00000362760 96 ntBASIC0.63□□□□□ -2.31
GDF1P27539 Y_RNA.354-201ENST00000365448 111 ntBASIC0.63□□□□□ -2.31
GDF1P27539 Y_RNA.454-201ENST00000384224 113 ntBASIC0.63□□□□□ -2.31
GDF1P27539 MIR608-201ENST00000384820 100 ntBASIC0.63□□□□□ -2.31
GDF1P27539 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.63□□□□□ -2.31
GDF1P27539 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.63□□□□□ -2.31
GDF1P27539 RNU6-1165P-201ENST00000410119 107 ntBASIC0.63□□□□□ -2.31
GDF1P27539 RPS26P5-201ENST00000418544 335 ntBASIC0.63□□□□□ -2.31
GDF1P27539 AC074198.2-201ENST00000508153 258 ntBASIC0.63□□□□□ -2.31
GDF1P27539 AC107027.2-201ENST00000512197 115 ntBASIC0.63□□□□□ -2.31
GDF1P27539 RNA5SP436-201ENST00000516020 115 ntBASIC0.63□□□□□ -2.31
GDF1P27539 RNA5SP236-201ENST00000516169 116 ntBASIC0.63□□□□□ -2.31
GDF1P27539 RNU7-121P-201ENST00000516604 62 ntBASIC0.63□□□□□ -2.31
GDF1P27539 RNU6-861P-201ENST00000516745 106 ntBASIC0.63□□□□□ -2.31
GDF1P27539 AL353765.1-201ENST00000605514 183 ntBASIC0.63□□□□□ -2.31
GDF1P27539 AC020891.4-201ENST00000605745 93 ntBASIC0.63□□□□□ -2.31
GDF1P27539 AC010332.2-201ENST00000613083 1904 ntBASIC0.62□□□□□ -2.31
GDF1P27539 MIR30D-201ENST00000362283 70 ntBASIC0.62□□□□□ -2.31
GDF1P27539 Y_RNA.29-201ENST00000362570 113 ntBASIC0.62□□□□□ -2.31
GDF1P27539 RNU4-84P-201ENST00000364200 139 ntBASIC0.62□□□□□ -2.31
GDF1P27539 RNU1-133P-201ENST00000364867 167 ntBASIC0.62□□□□□ -2.31
GDF1P27539 RNU6-934P-201ENST00000365154 107 ntBASIC0.62□□□□□ -2.31
GDF1P27539 Y_RNA.441-201ENST00000384123 112 ntBASIC0.62□□□□□ -2.31
GDF1P27539 Y_RNA.785-201ENST00000384290 109 ntBASIC0.62□□□□□ -2.31
GDF1P27539 RNU6-239P-201ENST00000390990 99 ntBASIC0.62□□□□□ -2.31
GDF1P27539 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.62□□□□□ -2.31
GDF1P27539 AC113410.1-201ENST00000505029 247 ntBASIC0.62□□□□□ -2.31
GDF1P27539 Y_RNA.700-201ENST00000516806 100 ntBASIC0.62□□□□□ -2.31
GDF1P27539 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.62□□□□□ -2.31
GDF1P27539 AC021613.1-201ENST00000623880 111 ntBASIC0.62□□□□□ -2.31
GDF1P27539 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
GDF1P27539 Y_RNA.337-201ENST00000365312 102 ntBASIC0.61□□□□□ -2.31
GDF1P27539 MTND5P15-201ENST00000434246 349 ntBASIC0.61□□□□□ -2.31
GDF1P27539 AC067940.1-201ENST00000458411 300 ntBASIC0.61□□□□□ -2.31
GDF1P27539 SNORA81.3-201ENST00000517283 198 ntBASIC0.61□□□□□ -2.31
GDF1P27539 RNU2-60P-201ENST00000517290 128 ntBASIC0.61□□□□□ -2.31
GDF1P27539 AC004812.1-201ENST00000540773 146 ntBASIC0.61□□□□□ -2.31
GDF1P27539 MIR4771-2-201ENST00000577758 74 ntBASIC0.61□□□□□ -2.31
GDF1P27539 MIR4771-1-201ENST00000582617 74 ntBASIC0.61□□□□□ -2.31
GDF1P27539 AC004792.1-201ENST00000614523 137 ntBASIC0.61□□□□□ -2.31
GDF1P27539 MIR3658-201ENST00000636291 56 ntBASIC0.61□□□□□ -2.31
GDF1P27539 AC023934.1-201ENST00000574529 2389 ntBASIC0.61□□□□□ -2.31
GDF1P27539 MIR1-1-201ENST00000362147 71 ntBASIC0.6□□□□□ -2.31
GDF1P27539 SNORD105-201ENST00000386910 85 ntBASIC0.6□□□□□ -2.31
GDF1P27539 SNORD99-201ENST00000408612 74 ntBASIC0.6□□□□□ -2.31
GDF1P27539 RNA5SP261-201ENST00000410536 106 ntBASIC0.6□□□□□ -2.31
GDF1P27539 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
GDF1P27539 MIR4676-201ENST00000583078 72 ntBASIC0.6□□□□□ -2.31
GDF1P27539 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.6□□□□□ -2.31
GDF1P27539 RNU6-349P-201ENST00000362402 107 ntBASIC0.59□□□□□ -2.31
GDF1P27539 SNORA22.1-201ENST00000362701 134 ntBASIC0.59□□□□□ -2.31
GDF1P27539 RNU4-16P-201ENST00000364737 141 ntBASIC0.59□□□□□ -2.31
GDF1P27539 Y_RNA.497-201ENST00000384447 98 ntBASIC0.59□□□□□ -2.31
GDF1P27539 SNORA75.5-201ENST00000391291 81 ntBASIC0.59□□□□□ -2.31
GDF1P27539 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.59□□□□□ -2.31
GDF1P27539 RNU6-588P-201ENST00000410281 105 ntBASIC0.59□□□□□ -2.31
GDF1P27539 AC244098.3-201ENST00000424803 96 ntBASIC0.59□□□□□ -2.31
GDF1P27539 MIR18B-201ENST00000454574 71 ntBASIC0.59□□□□□ -2.31
GDF1P27539 RNU6-1258P-201ENST00000516911 111 ntBASIC0.59□□□□□ -2.31
GDF1P27539 MIR4804-201ENST00000581683 73 ntBASIC0.59□□□□□ -2.31
GDF1P27539 AC025627.3-201ENST00000582078 182 ntBASIC0.59□□□□□ -2.31
GDF1P27539 AL136317.1-201ENST00000612653 226 ntBASIC0.59□□□□□ -2.31
GDF1P27539 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.59□□□□□ -2.31
GDF1P27539 Y_RNA.357-201ENST00000365487 109 ntBASIC0.58□□□□□ -2.32
GDF1P27539 RNY1P6-201ENST00000384193 109 ntBASIC0.58□□□□□ -2.32
GDF1P27539 RNU7-70P-201ENST00000516941 66 ntBASIC0.58□□□□□ -2.32
GDF1P27539 MIR3646-201ENST00000578301 84 ntBASIC0.58□□□□□ -2.32
GDF1P27539 Y_RNA.757-201ENST00000578934 114 ntBASIC0.58□□□□□ -2.32
GDF1P27539 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.58□□□□□ -2.32
GDF1P27539 PVT1_3.1-201ENST00000620853 95 ntBASIC0.58□□□□□ -2.32
GDF1P27539 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.57□□□□□ -2.32
GDF1P27539 MIR598-201ENST00000384868 97 ntBASIC0.57□□□□□ -2.32
GDF1P27539 PCNPP3-201ENST00000393579 471 ntBASIC0.57□□□□□ -2.32
GDF1P27539 RNU6-1135P-201ENST00000411083 103 ntBASIC0.57□□□□□ -2.32
GDF1P27539 RNU7-185P-201ENST00000459215 60 ntBASIC0.57□□□□□ -2.32
GDF1P27539 Y_RNA.662-201ENST00000516028 97 ntBASIC0.57□□□□□ -2.32
GDF1P27539 MIR3152-201ENST00000579801 74 ntBASIC0.57□□□□□ -2.32
GDF1P27539 DNAJC19P2-201ENST00000593340 302 ntBASIC0.57□□□□□ -2.32
GDF1P27539 AL662814.1-201ENST00000617364 121 ntBASIC0.57□□□□□ -2.32
GDF1P27539 MIR6844-201ENST00000637122 62 ntBASIC0.57□□□□□ -2.32
GDF1P27539 Y_RNA.251-201ENST00000364551 99 ntBASIC0.56□□□□□ -2.32
GDF1P27539 Y_RNA.272-201ENST00000364696 102 ntBASIC0.56□□□□□ -2.32
GDF1P27539 RNU6-1318P-201ENST00000365389 103 ntBASIC0.56□□□□□ -2.32
GDF1P27539 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms