Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PTPREP23469 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PTPREP23469 MIR516A2-201ENST00000384888 90 ntBASIC3.26□□□□□ -1.89
PTPREP23469 MIR516A1-201ENST00000385033 90 ntBASIC3.26□□□□□ -1.89
PTPREP23469 RNA5SP445-201ENST00000515889 115 ntBASIC3.26□□□□□ -1.89
PTPREP23469 AC104984.5-201ENST00000586878 94 ntBASIC3.26□□□□□ -1.89
PTPREP23469 MIR4251-201ENST00000635819 61 ntBASIC3.26□□□□□ -1.89
PTPREP23469 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
PTPREP23469 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.26□□□□□ -1.89
PTPREP23469 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PTPREP23469 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PTPREP23469 Y_RNA.119-201ENST00000363301 96 ntBASIC3.25□□□□□ -1.89
PTPREP23469 MIR512-1-201ENST00000384913 84 ntBASIC3.25□□□□□ -1.89
PTPREP23469 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PTPREP23469 RNU6-243P-201ENST00000391140 107 ntBASIC3.25□□□□□ -1.89
PTPREP23469 RNU6-1254P-201ENST00000391266 104 ntBASIC3.25□□□□□ -1.89
PTPREP23469 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.25□□□□□ -1.89
PTPREP23469 AC093423.1-201ENST00000440817 142 ntBASIC3.25□□□□□ -1.89
PTPREP23469 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.25□□□□□ -1.89
PTPREP23469 snoU13.27-201ENST00000459278 104 ntBASIC3.25□□□□□ -1.89
PTPREP23469 MIR3935-201ENST00000583472 104 ntBASIC3.25□□□□□ -1.89
PTPREP23469 SNORD92-201ENST00000585078 85 ntBASIC3.25□□□□□ -1.89
PTPREP23469 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PTPREP23469 MIRLET7F1-201ENST00000362202 87 ntBASIC3.24□□□□□ -1.89
PTPREP23469 MIR424-201ENST00000362227 98 ntBASIC3.24□□□□□ -1.89
PTPREP23469 RNU1-112P-201ENST00000364401 164 ntBASIC3.24□□□□□ -1.89
PTPREP23469 SNORA8.1-201ENST00000384250 140 ntBASIC3.24□□□□□ -1.89
PTPREP23469 MIR9-2-201ENST00000384838 87 ntBASIC3.24□□□□□ -1.89
PTPREP23469 MIR9-1-201ENST00000385198 89 ntBASIC3.24□□□□□ -1.89
PTPREP23469 HMGN2P39-201ENST00000398005 273 ntBASIC3.24□□□□□ -1.89
PTPREP23469 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.24□□□□□ -1.89
PTPREP23469 YWHAEP2-201ENST00000580066 112 ntBASIC3.24□□□□□ -1.89
PTPREP23469 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.24□□□□□ -1.89
PTPREP23469 YWHAEP3-201ENST00000582767 121 ntBASIC3.24□□□□□ -1.89
PTPREP23469 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.24□□□□□ -1.89
PTPREP23469 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.24□□□□□ -1.89
PTPREP23469 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PTPREP23469 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PTPREP23469 AL138827.1-201ENST00000402666 306 ntBASIC3.23□□□□□ -1.89
PTPREP23469 AC005520.4-201ENST00000604337 90 ntBASIC3.23□□□□□ -1.89
PTPREP23469 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
PTPREP23469 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PTPREP23469 RNA5SP508-201ENST00000411327 119 ntBASIC3.22□□□□□ -1.89
PTPREP23469 SUB1P4-201ENST00000566062 339 ntBASIC3.22□□□□□ -1.89
PTPREP23469 MIR6715A-201ENST00000615929 79 ntBASIC3.22□□□□□ -1.89
PTPREP23469 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PTPREP23469 RNU6-859P-201ENST00000362728 107 ntBASIC3.21□□□□□ -1.9
PTPREP23469 RNU6-330P-201ENST00000363015 107 ntBASIC3.21□□□□□ -1.9
PTPREP23469 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PTPREP23469 RNU6-466P-201ENST00000391224 103 ntBASIC3.21□□□□□ -1.9
PTPREP23469 AC003982.1-202ENST00000469928 248 ntBASIC3.21□□□□□ -1.9
PTPREP23469 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.21□□□□□ -1.9
PTPREP23469 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PTPREP23469 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPREP23469 Y_RNA.36-201ENST00000362602 112 ntBASIC3.2□□□□□ -1.9
PTPREP23469 RNU1-91P-201ENST00000364746 163 ntBASIC3.2□□□□□ -1.9
PTPREP23469 MIR1283-2-201ENST00000408621 87 ntBASIC3.2□□□□□ -1.9
PTPREP23469 AC244023.1-201ENST00000426884 112 ntBASIC3.2□□□□□ -1.9
PTPREP23469 HMGN2P3-201ENST00000433603 273 ntBASIC3.2□□□□□ -1.9
PTPREP23469 HMGN2P5-201ENST00000436882 273 ntBASIC3.2□□□□□ -1.9
PTPREP23469 snoU13.2-201ENST00000459201 104 ntBASIC3.2□□□□□ -1.9
PTPREP23469 RNU7-41P-201ENST00000515917 61 ntBASIC3.2□□□□□ -1.9
PTPREP23469 MIR3126-201ENST00000577443 74 ntBASIC3.2□□□□□ -1.9
PTPREP23469 AC242498.1-201ENST00000604134 111 ntBASIC3.2□□□□□ -1.9
PTPREP23469 AC108206.1-201ENST00000570186 4159 ntBASIC3.19□□□□□ -1.9
PTPREP23469 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPREP23469 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPREP23469 RNU6-112P-201ENST00000363599 104 ntBASIC3.19□□□□□ -1.9
PTPREP23469 RNU6-499P-201ENST00000365615 107 ntBASIC3.19□□□□□ -1.9
PTPREP23469 MIR1261-201ENST00000408659 82 ntBASIC3.19□□□□□ -1.9
PTPREP23469 SNORD88.1-201ENST00000408684 91 ntBASIC3.19□□□□□ -1.9
PTPREP23469 RNA5SP21-201ENST00000410917 96 ntBASIC3.19□□□□□ -1.9
PTPREP23469 AL513328.1-201ENST00000446460 224 ntBASIC3.19□□□□□ -1.9
PTPREP23469 AC245517.4-201ENST00000448601 281 ntBASIC3.19□□□□□ -1.9
PTPREP23469 RNA5SP481-201ENST00000516814 122 ntBASIC3.19□□□□□ -1.9
PTPREP23469 MIR3605-201ENST00000583214 100 ntBASIC3.19□□□□□ -1.9
PTPREP23469 AL449363.1-201ENST00000617815 186 ntBASIC3.19□□□□□ -1.9
PTPREP23469 AC092435.3-201ENST00000565538 3654 ntBASIC3.18□□□□□ -1.9
PTPREP23469 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PTPREP23469 RNA5SP68-201ENST00000363885 119 ntBASIC3.18□□□□□ -1.9
PTPREP23469 MIR518E-201ENST00000385252 88 ntBASIC3.18□□□□□ -1.9
PTPREP23469 MIR942-201ENST00000401111 86 ntBASIC3.18□□□□□ -1.9
PTPREP23469 AC009474.2-201ENST00000451383 136 ntBASIC3.18□□□□□ -1.9
PTPREP23469 snoU13.17-201ENST00000458802 104 ntBASIC3.18□□□□□ -1.9
PTPREP23469 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPREP23469 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPREP23469 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PTPREP23469 MIR588-201ENST00000384900 83 ntBASIC3.17□□□□□ -1.9
PTPREP23469 SNORA48.1-201ENST00000390879 135 ntBASIC3.17□□□□□ -1.9
PTPREP23469 SNORA9.3-201ENST00000516383 129 ntBASIC3.17□□□□□ -1.9
PTPREP23469 AC121758.2-201ENST00000553271 193 ntBASIC3.17□□□□□ -1.9
PTPREP23469 MIR4506-201ENST00000584693 77 ntBASIC3.17□□□□□ -1.9
PTPREP23469 AL096861.1-201ENST00000610899 123 ntBASIC3.17□□□□□ -1.9
PTPREP23469 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPREP23469 MIR26A1-201ENST00000362205 77 ntBASIC3.16□□□□□ -1.9
PTPREP23469 RNU6-957P-201ENST00000363652 99 ntBASIC3.16□□□□□ -1.9
PTPREP23469 RNU6-154P-201ENST00000384306 106 ntBASIC3.16□□□□□ -1.9
PTPREP23469 RN7SKP123-201ENST00000410732 291 ntBASIC3.16□□□□□ -1.9
PTPREP23469 RNU7-106P-201ENST00000459514 67 ntBASIC3.16□□□□□ -1.9
PTPREP23469 MIR6817-201ENST00000615588 66 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 268.1 ms