Protein–RNA interactions for Protein: P17035

ZNF28, Zinc finger protein 28, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28P17035 AC026421.1-201ENST00000519101 163 ntBASIC1.91□□□□□ -2.1
ZNF28P17035 MIR548Z-201ENST00000584743 97 ntBASIC1.91□□□□□ -2.1
ZNF28P17035 AC062037.1-201ENST00000605302 128 ntBASIC1.91□□□□□ -2.1
ZNF28P17035 AC091304.10-201ENST00000641554 121 ntBASIC1.91□□□□□ -2.1
ZNF28P17035 AP000553.5-201ENST00000641933 54 ntBASIC1.91□□□□□ -2.1
ZNF28P17035 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
ZNF28P17035 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
ZNF28P17035 RNU6-1313P-201ENST00000362622 102 ntBASIC1.9□□□□□ -2.11
ZNF28P17035 RNA5SP259-201ENST00000365541 109 ntBASIC1.9□□□□□ -2.11
ZNF28P17035 MIR194-1-201ENST00000384892 85 ntBASIC1.9□□□□□ -2.11
ZNF28P17035 AL451046.2-201ENST00000403074 277 ntBASIC1.9□□□□□ -2.11
ZNF28P17035 MRPL35P3-201ENST00000421557 364 ntBASIC1.9□□□□□ -2.11
ZNF28P17035 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
ZNF28P17035 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.9□□□□□ -2.11
ZNF28P17035 AC096720.1-201ENST00000604441 183 ntBASIC1.9□□□□□ -2.11
ZNF28P17035 U7.3-201ENST00000616123 62 ntBASIC1.9□□□□□ -2.11
ZNF28P17035 MIR4251-201ENST00000635819 61 ntBASIC1.9□□□□□ -2.11
ZNF28P17035 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ZNF28P17035 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
ZNF28P17035 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
ZNF28P17035 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ZNF28P17035 Y_RNA.96-201ENST00000363092 109 ntBASIC1.89□□□□□ -2.11
ZNF28P17035 RNU6-60P-201ENST00000364792 103 ntBASIC1.89□□□□□ -2.11
ZNF28P17035 MIR513A1-201ENST00000385138 129 ntBASIC1.89□□□□□ -2.11
ZNF28P17035 SNORA40.18-201ENST00000391200 128 ntBASIC1.89□□□□□ -2.11
ZNF28P17035 SNORA26.9-201ENST00000391322 122 ntBASIC1.89□□□□□ -2.11
ZNF28P17035 RNU6-602P-201ENST00000411155 105 ntBASIC1.89□□□□□ -2.11
ZNF28P17035 RNU6-717P-201ENST00000459076 104 ntBASIC1.89□□□□□ -2.11
ZNF28P17035 AC108729.3-201ENST00000513484 108 ntBASIC1.89□□□□□ -2.11
ZNF28P17035 RNU7-2P-201ENST00000516096 62 ntBASIC1.89□□□□□ -2.11
ZNF28P17035 RNU6-162P-201ENST00000516228 103 ntBASIC1.89□□□□□ -2.11
ZNF28P17035 RNU7-35P-201ENST00000517174 62 ntBASIC1.89□□□□□ -2.11
ZNF28P17035 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.89□□□□□ -2.11
ZNF28P17035 MIR548AO-201ENST00000579992 96 ntBASIC1.89□□□□□ -2.11
ZNF28P17035 Y_RNA.95-201ENST00000363079 95 ntBASIC1.88□□□□□ -2.11
ZNF28P17035 SNORD115-35-201ENST00000365122 82 ntBASIC1.88□□□□□ -2.11
ZNF28P17035 RNA5SP37-201ENST00000365420 130 ntBASIC1.88□□□□□ -2.11
ZNF28P17035 MIR583-201ENST00000384846 75 ntBASIC1.88□□□□□ -2.11
ZNF28P17035 MIR206-201ENST00000384872 86 ntBASIC1.88□□□□□ -2.11
ZNF28P17035 MIR450A2-201ENST00000385022 100 ntBASIC1.88□□□□□ -2.11
ZNF28P17035 MIR653-201ENST00000385279 96 ntBASIC1.88□□□□□ -2.11
ZNF28P17035 RNU7-41P-201ENST00000515917 61 ntBASIC1.88□□□□□ -2.11
ZNF28P17035 RN7SKP12-201ENST00000516275 143 ntBASIC1.88□□□□□ -2.11
ZNF28P17035 SNORD111.1-201ENST00000516421 86 ntBASIC1.88□□□□□ -2.11
ZNF28P17035 MIR5089-201ENST00000580047 84 ntBASIC1.88□□□□□ -2.11
ZNF28P17035 MIR4777-201ENST00000583710 86 ntBASIC1.88□□□□□ -2.11
ZNF28P17035 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
ZNF28P17035 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
ZNF28P17035 ZNF355P-201ENST00000427301 3216 ntBASIC1.87□□□□□ -2.11
ZNF28P17035 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ZNF28P17035 AC019129.1-201ENST00000403786 261 ntBASIC1.87□□□□□ -2.11
ZNF28P17035 RNA5SP338-201ENST00000410495 85 ntBASIC1.87□□□□□ -2.11
ZNF28P17035 RNU6-1086P-201ENST00000410930 100 ntBASIC1.87□□□□□ -2.11
ZNF28P17035 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.87□□□□□ -2.11
ZNF28P17035 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
ZNF28P17035 AL096840.1-201ENST00000603287 93 ntBASIC1.87□□□□□ -2.11
ZNF28P17035 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.87□□□□□ -2.11
ZNF28P17035 MIR494-201ENST00000349529 81 ntBASIC1.86□□□□□ -2.11
ZNF28P17035 RNA5SP160-201ENST00000364866 120 ntBASIC1.86□□□□□ -2.11
ZNF28P17035 RNA5SP138-201ENST00000365098 114 ntBASIC1.86□□□□□ -2.11
ZNF28P17035 RNU6-439P-201ENST00000384188 106 ntBASIC1.86□□□□□ -2.11
ZNF28P17035 AL161935.2-201ENST00000414627 60 ntBASIC1.86□□□□□ -2.11
ZNF28P17035 AL445685.2-201ENST00000422551 342 ntBASIC1.86□□□□□ -2.11
ZNF28P17035 AC003989.2-201ENST00000440224 169 ntBASIC1.86□□□□□ -2.11
ZNF28P17035 JTBP1-201ENST00000441314 247 ntBASIC1.86□□□□□ -2.11
ZNF28P17035 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.86□□□□□ -2.11
ZNF28P17035 Y_RNA.705-201ENST00000516862 110 ntBASIC1.86□□□□□ -2.11
ZNF28P17035 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.86□□□□□ -2.11
ZNF28P17035 RNU1-17P-201ENST00000363022 152 ntBASIC1.85□□□□□ -2.11
ZNF28P17035 RNA5SP48-201ENST00000363969 126 ntBASIC1.85□□□□□ -2.11
ZNF28P17035 Y_RNA.467-201ENST00000384297 102 ntBASIC1.85□□□□□ -2.11
ZNF28P17035 SNORD38B-201ENST00000384690 67 ntBASIC1.85□□□□□ -2.11
ZNF28P17035 RNU6-1307P-201ENST00000391012 103 ntBASIC1.85□□□□□ -2.11
ZNF28P17035 RNU2-40P-201ENST00000410833 196 ntBASIC1.85□□□□□ -2.11
ZNF28P17035 AC090844.1-201ENST00000422019 156 ntBASIC1.85□□□□□ -2.11
ZNF28P17035 SNORD67.1-201ENST00000516618 108 ntBASIC1.85□□□□□ -2.11
ZNF28P17035 AC022254.1-201ENST00000567857 235 ntBASIC1.85□□□□□ -2.11
ZNF28P17035 MIR376B-201ENST00000614515 100 ntBASIC1.85□□□□□ -2.11
ZNF28P17035 SNORD38B-202ENST00000625943 69 ntBASIC1.85□□□□□ -2.11
ZNF28P17035 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
ZNF28P17035 Y_RNA.17-201ENST00000362433 111 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 RNU6-865P-201ENST00000364772 107 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 RNA5SP173-201ENST00000364857 136 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 Y_RNA.448-201ENST00000384185 108 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 RNU6-820P-201ENST00000384273 107 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 RNA5SP212-201ENST00000391223 107 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 Y_RNA.593-201ENST00000410292 98 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 RNU6-887P-201ENST00000410660 100 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 BTF3P4-201ENST00000418852 495 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 RPL31P63-201ENST00000422565 375 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 AC025033.1-201ENST00000463883 194 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 UBL5P1-201ENST00000507979 193 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 RNU7-79P-201ENST00000516082 62 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 RNU6-922P-201ENST00000516753 99 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 RNU1-40P-201ENST00000516816 164 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 RNU1-97P-201ENST00000516872 164 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 MIR4299-201ENST00000577899 72 ntBASIC1.84□□□□□ -2.11
ZNF28P17035 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.84□□□□□ -2.11
ZNF28P17035 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms