Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.42□□□□□ -2.64
CXCL1P09341 RNU6-274P-201ENST00000459566 107 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 RNU7-137P-201ENST00000516788 62 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 MIR3179-1-201ENST00000578940 84 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 MIR3179-2-201ENST00000579107 84 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 MIR3179-3-201ENST00000579566 84 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 AC119751.7-201ENST00000600494 245 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 AC097639.2-201ENST00000603159 172 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 RNU6-86P-201ENST00000606534 107 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 AC011603.4-201ENST00000611325 277 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 MIR3179-4-201ENST00000617599 84 ntBASIC-1.42□□□□□ -2.64
CXCL1P09341 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.43□□□□□ -2.64
CXCL1P09341 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.43□□□□□ -2.64
CXCL1P09341 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.43□□□□□ -2.64
CXCL1P09341 MIR628-201ENST00000385229 95 ntBASIC-1.43□□□□□ -2.64
CXCL1P09341 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.43□□□□□ -2.64
CXCL1P09341 RNU6-191P-201ENST00000516295 94 ntBASIC-1.43□□□□□ -2.64
CXCL1P09341 RNA5SP153-201ENST00000516498 76 ntBASIC-1.43□□□□□ -2.64
CXCL1P09341 AP000676.1-201ENST00000533307 52 ntBASIC-1.43□□□□□ -2.64
CXCL1P09341 AC024909.2-201ENST00000553035 286 ntBASIC-1.43□□□□□ -2.64
CXCL1P09341 MIR5688-201ENST00000580619 83 ntBASIC-1.43□□□□□ -2.64
CXCL1P09341 SNORD114-10-201ENST00000363409 72 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 SNORD115-44-201ENST00000365391 82 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 MT-TY-201ENST00000387409 66 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 SNORA53-201ENST00000391141 249 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 MIR548F5-201ENST00000408421 86 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 MTND1P14-201ENST00000427400 950 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 AC244090.1-201ENST00000441884 93 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 snoU13.11-201ENST00000459219 104 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.44□□□□□ -2.64
CXCL1P09341 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 RNU6-264P-201ENST00000517134 104 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.44□□□□□ -2.64
CXCL1P09341 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 RNU6-21P-201ENST00000384710 107 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
CXCL1P09341 MIR548I2-201ENST00000408348 149 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 MTND1P34-201ENST00000438556 671 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 snoU13.19-201ENST00000459148 104 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 RNU7-169P-201ENST00000459456 61 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 SNORA40.17-201ENST00000517256 115 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 MIR4460-201ENST00000577862 86 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 uc_338.19-201ENST00000616808 99 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 AC138305.3-201ENST00000624988 240 ntBASIC-1.45□□□□□ -2.64
CXCL1P09341 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.46□□□□□ -2.64
CXCL1P09341 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.46□□□□□ -2.64
CXCL1P09341 MIR526A2-201ENST00000390198 65 ntBASIC-1.46□□□□□ -2.64
CXCL1P09341 RNU2-66P-201ENST00000410650 161 ntBASIC-1.46□□□□□ -2.64
CXCL1P09341 AC006362.1-201ENST00000567392 174 ntBASIC-1.46□□□□□ -2.64
CXCL1P09341 MIR548AG2-201ENST00000581228 64 ntBASIC-1.46□□□□□ -2.64
CXCL1P09341 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.46□□□□□ -2.64
CXCL1P09341 SNORD114-25-201ENST00000363742 72 ntBASIC-1.47□□□□□ -2.64
CXCL1P09341 RNY3-201ENST00000365484 102 ntBASIC-1.47□□□□□ -2.64
CXCL1P09341 RNU6-484P-201ENST00000384016 107 ntBASIC-1.47□□□□□ -2.64
CXCL1P09341 AC107399.1-201ENST00000451226 265 ntBASIC-1.47□□□□□ -2.64
CXCL1P09341 AC109635.3-201ENST00000529536 185 ntBASIC-1.47□□□□□ -2.64
CXCL1P09341 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.47□□□□□ -2.64
CXCL1P09341 MIR5692C2-201ENST00000577959 77 ntBASIC-1.47□□□□□ -2.64
CXCL1P09341 MIR378F-201ENST00000578143 78 ntBASIC-1.47□□□□□ -2.64
CXCL1P09341 AL008718.3-201ENST00000610217 321 ntBASIC-1.47□□□□□ -2.64
CXCL1P09341 AC090582.1-201ENST00000636321 199 ntBASIC-1.47□□□□□ -2.64
CXCL1P09341 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.48□□□□□ -2.65
CXCL1P09341 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.48□□□□□ -2.65
CXCL1P09341 snoU13.13-201ENST00000458842 104 ntBASIC-1.48□□□□□ -2.65
CXCL1P09341 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.48□□□□□ -2.65
CXCL1P09341 RNA5SP470-201ENST00000516463 106 ntBASIC-1.48□□□□□ -2.65
CXCL1P09341 SNORD67.1-201ENST00000516618 108 ntBASIC-1.48□□□□□ -2.65
CXCL1P09341 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.48□□□□□ -2.65
CXCL1P09341 MIR3165-201ENST00000579874 75 ntBASIC-1.48□□□□□ -2.65
CXCL1P09341 MIR4499-201ENST00000584834 69 ntBASIC-1.48□□□□□ -2.65
CXCL1P09341 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.48□□□□□ -2.65
CXCL1P09341 SNORD115-2-201ENST00000362842 82 ntBASIC-1.49□□□□□ -2.65
CXCL1P09341 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.49□□□□□ -2.65
CXCL1P09341 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.49□□□□□ -2.65
CXCL1P09341 RNY3P11-201ENST00000364153 102 ntBASIC-1.49□□□□□ -2.65
CXCL1P09341 RNU4-16P-201ENST00000364737 141 ntBASIC-1.49□□□□□ -2.65
CXCL1P09341 SNORD115-20-201ENST00000365099 82 ntBASIC-1.49□□□□□ -2.65
CXCL1P09341 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.49□□□□□ -2.65
CXCL1P09341 RNU6-30P-201ENST00000384561 107 ntBASIC-1.49□□□□□ -2.65
CXCL1P09341 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.49□□□□□ -2.65
CXCL1P09341 RNU6-764P-201ENST00000516396 105 ntBASIC-1.49□□□□□ -2.65
CXCL1P09341 RNU7-70P-201ENST00000516941 66 ntBASIC-1.49□□□□□ -2.65
CXCL1P09341 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.49□□□□□ -2.65
CXCL1P09341 AC015540.1-201ENST00000615828 501 ntBASIC-1.49□□□□□ -2.65
CXCL1P09341 SNORD115-25-201ENST00000362619 82 ntBASIC-1.5□□□□□ -2.65
CXCL1P09341 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.5□□□□□ -2.65
CXCL1P09341 SNORD74.6-201ENST00000364796 70 ntBASIC-1.5□□□□□ -2.65
CXCL1P09341 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.5□□□□□ -2.65
CXCL1P09341 RN7SKP19-201ENST00000516016 252 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 1607.5 ms