Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MIR302D-201ENST00000362275 68 ntBASIC1.87□□□□□ -2.11
NPHS1O60500 RNU6-832P-201ENST00000363319 107 ntBASIC1.87□□□□□ -2.11
NPHS1O60500 SNORA64-201ENST00000384674 134 ntBASIC1.87□□□□□ -2.11
NPHS1O60500 MIR1302-7-201ENST00000408841 72 ntBASIC1.87□□□□□ -2.11
NPHS1O60500 Z98742.3-201ENST00000418637 326 ntBASIC1.87□□□□□ -2.11
NPHS1O60500 snoU13.9-201ENST00000458927 103 ntBASIC1.87□□□□□ -2.11
NPHS1O60500 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.87□□□□□ -2.11
NPHS1O60500 RNU7-79P-201ENST00000516082 62 ntBASIC1.87□□□□□ -2.11
NPHS1O60500 AP000942.3-201ENST00000603702 160 ntBASIC1.87□□□□□ -2.11
NPHS1O60500 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
NPHS1O60500 SNORD1A-201ENST00000364968 72 ntBASIC1.86□□□□□ -2.11
NPHS1O60500 MIR30A-201ENST00000385092 71 ntBASIC1.86□□□□□ -2.11
NPHS1O60500 RNU6-1086P-201ENST00000410930 100 ntBASIC1.86□□□□□ -2.11
NPHS1O60500 AC244023.1-201ENST00000426884 112 ntBASIC1.86□□□□□ -2.11
NPHS1O60500 AC019176.1-201ENST00000518519 225 ntBASIC1.86□□□□□ -2.11
NPHS1O60500 SNRPGP19-201ENST00000603826 189 ntBASIC1.86□□□□□ -2.11
NPHS1O60500 AC242498.1-201ENST00000604134 111 ntBASIC1.86□□□□□ -2.11
NPHS1O60500 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
NPHS1O60500 MIR4679-1-201ENST00000637619 75 ntBASIC1.86□□□□□ -2.11
NPHS1O60500 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.86□□□□□ -2.11
NPHS1O60500 SNORD115-35-201ENST00000365122 82 ntBASIC1.85□□□□□ -2.11
NPHS1O60500 SNORA67.3-201ENST00000384366 140 ntBASIC1.85□□□□□ -2.11
NPHS1O60500 MIR206-201ENST00000384872 86 ntBASIC1.85□□□□□ -2.11
NPHS1O60500 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.85□□□□□ -2.11
NPHS1O60500 SNORA3.2-201ENST00000408221 125 ntBASIC1.85□□□□□ -2.11
NPHS1O60500 MTATP8P2-201ENST00000435212 202 ntBASIC1.85□□□□□ -2.11
NPHS1O60500 SCARNA23-201ENST00000516060 130 ntBASIC1.85□□□□□ -2.11
NPHS1O60500 RNU7-2P-201ENST00000516096 62 ntBASIC1.85□□□□□ -2.11
NPHS1O60500 SNORD67.1-201ENST00000516618 108 ntBASIC1.85□□□□□ -2.11
NPHS1O60500 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
NPHS1O60500 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
NPHS1O60500 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NPHS1O60500 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
NPHS1O60500 Y_RNA.369-201ENST00000365568 117 ntBASIC1.84□□□□□ -2.11
NPHS1O60500 MIR488-201ENST00000365739 83 ntBASIC1.84□□□□□ -2.11
NPHS1O60500 RNU6-1307P-201ENST00000391012 103 ntBASIC1.84□□□□□ -2.11
NPHS1O60500 Y_RNA.601-201ENST00000410500 113 ntBASIC1.84□□□□□ -2.11
NPHS1O60500 RN7SKP223-201ENST00000410582 62 ntBASIC1.84□□□□□ -2.11
NPHS1O60500 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NPHS1O60500 RNU6-970P-201ENST00000516312 107 ntBASIC1.84□□□□□ -2.11
NPHS1O60500 AC006254.2-201ENST00000603259 279 ntBASIC1.84□□□□□ -2.11
NPHS1O60500 AL512310.12-203ENST00000640543 90 ntBASIC1.84□□□□□ -2.11
NPHS1O60500 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
NPHS1O60500 Y_RNA.93-201ENST00000363066 109 ntBASIC1.83□□□□□ -2.12
NPHS1O60500 Y_RNA.107-201ENST00000363190 121 ntBASIC1.83□□□□□ -2.12
NPHS1O60500 SNORA16.1-201ENST00000364597 132 ntBASIC1.83□□□□□ -2.12
NPHS1O60500 RNU6-1131P-201ENST00000364955 107 ntBASIC1.83□□□□□ -2.12
NPHS1O60500 RNA5SP126-201ENST00000365092 109 ntBASIC1.83□□□□□ -2.12
NPHS1O60500 RNU6-1201P-201ENST00000384227 107 ntBASIC1.83□□□□□ -2.12
NPHS1O60500 RNU6-1018P-201ENST00000516577 106 ntBASIC1.83□□□□□ -2.12
NPHS1O60500 RNU6-158P-201ENST00000517104 100 ntBASIC1.83□□□□□ -2.12
NPHS1O60500 Y_RNA.10-201ENST00000362371 110 ntBASIC1.82□□□□□ -2.12
NPHS1O60500 RNU6-49P-201ENST00000384256 107 ntBASIC1.82□□□□□ -2.12
NPHS1O60500 RPL39P39-201ENST00000455840 151 ntBASIC1.82□□□□□ -2.12
NPHS1O60500 AC079140.2-201ENST00000506193 142 ntBASIC1.82□□□□□ -2.12
NPHS1O60500 RNU6-795P-201ENST00000516323 103 ntBASIC1.82□□□□□ -2.12
NPHS1O60500 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.82□□□□□ -2.12
NPHS1O60500 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.82□□□□□ -2.12
NPHS1O60500 AC012531.4-201ENST00000616509 177 ntBASIC1.82□□□□□ -2.12
NPHS1O60500 AC105081.1-201ENST00000617727 106 ntBASIC1.82□□□□□ -2.12
NPHS1O60500 RNU6-1313P-201ENST00000362622 102 ntBASIC1.81□□□□□ -2.12
NPHS1O60500 U8.2-201ENST00000363156 134 ntBASIC1.81□□□□□ -2.12
NPHS1O60500 RNY1P13-201ENST00000365030 105 ntBASIC1.81□□□□□ -2.12
NPHS1O60500 Y_RNA.466-201ENST00000384294 113 ntBASIC1.81□□□□□ -2.12
NPHS1O60500 RNA5SP237-201ENST00000410414 113 ntBASIC1.81□□□□□ -2.12
NPHS1O60500 RNU7-137P-201ENST00000516788 62 ntBASIC1.81□□□□□ -2.12
NPHS1O60500 AP003716.2-201ENST00000528260 108 ntBASIC1.81□□□□□ -2.12
NPHS1O60500 AC141846.1-201ENST00000568348 142 ntBASIC1.81□□□□□ -2.12
NPHS1O60500 AC091304.10-201ENST00000641554 121 ntBASIC1.81□□□□□ -2.12
NPHS1O60500 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
NPHS1O60500 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NPHS1O60500 RNU6-396P-201ENST00000365369 105 ntBASIC1.8□□□□□ -2.12
NPHS1O60500 Y_RNA.377-201ENST00000365644 108 ntBASIC1.8□□□□□ -2.12
NPHS1O60500 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.8□□□□□ -2.12
NPHS1O60500 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.8□□□□□ -2.12
NPHS1O60500 AL133373.1-201ENST00000497098 94 ntBASIC1.8□□□□□ -2.12
NPHS1O60500 UBL5P1-201ENST00000507979 193 ntBASIC1.8□□□□□ -2.12
NPHS1O60500 AC108729.3-201ENST00000513484 108 ntBASIC1.8□□□□□ -2.12
NPHS1O60500 AC024614.2-201ENST00000577584 372 ntBASIC1.8□□□□□ -2.12
NPHS1O60500 MIR3198-2-201ENST00000577868 80 ntBASIC1.8□□□□□ -2.12
NPHS1O60500 MIR3937-201ENST00000580135 106 ntBASIC1.8□□□□□ -2.12
NPHS1O60500 MIR548Z-201ENST00000584743 97 ntBASIC1.8□□□□□ -2.12
NPHS1O60500 AL442128.1-201ENST00000615151 90 ntBASIC1.8□□□□□ -2.12
NPHS1O60500 MIR2052-201ENST00000636055 55 ntBASIC1.8□□□□□ -2.12
NPHS1O60500 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NPHS1O60500 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
NPHS1O60500 RNU6-170P-201ENST00000362832 104 ntBASIC1.79□□□□□ -2.12
NPHS1O60500 Y_RNA.448-201ENST00000384185 108 ntBASIC1.79□□□□□ -2.12
NPHS1O60500 MIR588-201ENST00000384900 83 ntBASIC1.79□□□□□ -2.12
NPHS1O60500 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NPHS1O60500 AC027119.1-201ENST00000440877 241 ntBASIC1.79□□□□□ -2.12
NPHS1O60500 snoU13.2-201ENST00000459201 104 ntBASIC1.79□□□□□ -2.12
NPHS1O60500 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.79□□□□□ -2.12
NPHS1O60500 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
NPHS1O60500 AL662814.1-201ENST00000617364 121 ntBASIC1.79□□□□□ -2.12
NPHS1O60500 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NPHS1O60500 SNORD114-10-201ENST00000363409 72 ntBASIC1.78□□□□□ -2.12
NPHS1O60500 Y_RNA.247-201ENST00000364500 92 ntBASIC1.78□□□□□ -2.12
NPHS1O60500 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
NPHS1O60500 MIR34C-201ENST00000384831 77 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms