Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 COX6CP6-201ENST00000490840 228 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU4-71P-201ENST00000516258 113 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 MIR4804-201ENST00000581683 73 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 AC009779.6-201ENST00000603972 165 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 AC091932.4-201ENST00000623386 200 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 SNORD38B-202ENST00000625943 69 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 MIR6841-201ENST00000637129 72 ntBASIC0.49□□□□□ -2.33
TMX2-CTNND1H3BSU7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 MIR1-1-201ENST00000362147 71 ntBASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 MIR330-201ENST00000362196 94 ntBASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 Y_RNA.75-201ENST00000362927 97 ntBASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 Y_RNA.144-201ENST00000363521 113 ntBASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 Y_RNA.351-201ENST00000365436 96 ntBASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 Y_RNA.430-201ENST00000384081 110 ntBASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 MIR588-201ENST00000384900 83 ntBASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-1319P-201ENST00000390855 104 ntBASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-747P-201ENST00000390928 104 ntBASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-241P-201ENST00000391148 104 ntBASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-177P-201ENST00000411257 104 ntBASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 AC096949.1-201ENST00000412047 152 ntBASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 AC130289.1-201ENST00000577321 73 ntBASIC0.48□□□□□ -2.33
TMX2-CTNND1H3BSU7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 MIR411-201ENST00000362239 96 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 Y_RNA.182-201ENST00000363880 111 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNA5SP499-201ENST00000363982 119 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 SNORA1.1-201ENST00000364671 133 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-1336P-201ENST00000383886 109 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-643P-201ENST00000384018 107 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 MIR624-201ENST00000385217 97 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-1165P-201ENST00000410119 107 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNU6-994P-201ENST00000410507 111 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 Y_RNA.797-201ENST00000515977 94 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 SNORD116-25-201ENST00000516517 92 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 RNA5SP121-201ENST00000516537 101 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 MIR4676-201ENST00000583078 72 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 AL162730.1-201ENST00000605734 292 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 AC104465.1-201ENST00000611365 139 ntBASIC0.47□□□□□ -2.33
TMX2-CTNND1H3BSU7 AC010332.2-201ENST00000613083 1904 ntBASIC0.46□□□□□ -2.34
TMX2-CTNND1H3BSU7 SNORA20.1-201ENST00000364790 130 ntBASIC0.46□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNY1P8-201ENST00000383970 114 ntBASIC0.46□□□□□ -2.34
TMX2-CTNND1H3BSU7 MIR18B-201ENST00000454574 71 ntBASIC0.46□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU6-1258P-201ENST00000516911 111 ntBASIC0.46□□□□□ -2.34
TMX2-CTNND1H3BSU7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.46□□□□□ -2.34
TMX2-CTNND1H3BSU7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.46□□□□□ -2.34
TMX2-CTNND1H3BSU7 MIR4771-2-201ENST00000577758 74 ntBASIC0.46□□□□□ -2.34
TMX2-CTNND1H3BSU7 MIR4771-1-201ENST00000582617 74 ntBASIC0.46□□□□□ -2.34
TMX2-CTNND1H3BSU7 AC008608.1-201ENST00000603910 127 ntBASIC0.46□□□□□ -2.34
TMX2-CTNND1H3BSU7 MIR8087-201ENST00000612745 78 ntBASIC0.46□□□□□ -2.34
TMX2-CTNND1H3BSU7 MTND5P32-201ENST00000560711 1802 ntBASIC0.45□□□□□ -2.34
TMX2-CTNND1H3BSU7 MIR342-201ENST00000362212 99 ntBASIC0.45□□□□□ -2.34
TMX2-CTNND1H3BSU7 Y_RNA.85-201ENST00000363014 111 ntBASIC0.45□□□□□ -2.34
TMX2-CTNND1H3BSU7 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
TMX2-CTNND1H3BSU7 Y_RNA.274-201ENST00000364714 101 ntBASIC0.45□□□□□ -2.34
TMX2-CTNND1H3BSU7 MIR573-201ENST00000384964 99 ntBASIC0.45□□□□□ -2.34
TMX2-CTNND1H3BSU7 SEPT7P4-201ENST00000437076 306 ntBASIC0.45□□□□□ -2.34
TMX2-CTNND1H3BSU7 AC067940.1-201ENST00000458411 300 ntBASIC0.45□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNA5SP236-201ENST00000516169 116 ntBASIC0.45□□□□□ -2.34
TMX2-CTNND1H3BSU7 AC022559.1-201ENST00000520905 205 ntBASIC0.45□□□□□ -2.34
TMX2-CTNND1H3BSU7 AC011195.1-201ENST00000578177 177 ntBASIC0.45□□□□□ -2.34
TMX2-CTNND1H3BSU7 AL136317.1-201ENST00000612653 226 ntBASIC0.45□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNY1P11-201ENST00000363759 113 ntBASIC0.44□□□□□ -2.34
TMX2-CTNND1H3BSU7 Y_RNA.200-201ENST00000364018 102 ntBASIC0.44□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU6-1082P-201ENST00000364574 107 ntBASIC0.44□□□□□ -2.34
TMX2-CTNND1H3BSU7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU4-70P-201ENST00000384579 139 ntBASIC0.44□□□□□ -2.34
TMX2-CTNND1H3BSU7 SNORA79-201ENST00000408376 140 ntBASIC0.44□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNA5SP127-201ENST00000411051 133 ntBASIC0.44□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU7-185P-201ENST00000459215 60 ntBASIC0.44□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU7-80P-201ENST00000459562 61 ntBASIC0.44□□□□□ -2.34
TMX2-CTNND1H3BSU7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.44□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU6-1219P-201ENST00000516143 112 ntBASIC0.44□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU6-1149P-201ENST00000516810 97 ntBASIC0.44□□□□□ -2.34
TMX2-CTNND1H3BSU7 MIR4431-201ENST00000579990 94 ntBASIC0.44□□□□□ -2.34
TMX2-CTNND1H3BSU7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 AL596211.1-201ENST00000569873 2277 ntBASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU6-349P-201ENST00000362402 107 ntBASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 Y_RNA.83-201ENST00000363005 113 ntBASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 Y_RNA.115-201ENST00000363272 98 ntBASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU6-379P-201ENST00000363813 104 ntBASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU6-768P-201ENST00000384683 107 ntBASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 MIR520F-201ENST00000384824 87 ntBASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 MIR520H-201ENST00000385126 88 ntBASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 MIR125B2-201ENST00000385128 89 ntBASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU6-977P-201ENST00000516411 103 ntBASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNA5SP330-201ENST00000517096 96 ntBASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 SNORD92-201ENST00000585078 85 ntBASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 AC021613.1-201ENST00000623880 111 ntBASIC0.43□□□□□ -2.34
TMX2-CTNND1H3BSU7 SNORD100-201ENST00000408573 76 ntBASIC0.42□□□□□ -2.34
TMX2-CTNND1H3BSU7 RNU2-60P-201ENST00000517290 128 ntBASIC0.42□□□□□ -2.34
TMX2-CTNND1H3BSU7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.42□□□□□ -2.34
TMX2-CTNND1H3BSU7 MIR8066-201ENST00000617280 78 ntBASIC0.42□□□□□ -2.34
TMX2-CTNND1H3BSU7 AL662814.1-201ENST00000617364 121 ntBASIC0.42□□□□□ -2.34
TMX2-CTNND1H3BSU7 AC141273.2-201ENST00000618989 130 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms