Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 Y_RNA.679-201ENST00000516416 91 ntBASIC0.33□□□□□ -2.36
TRAPPC4Q9Y296 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.33□□□□□ -2.36
TRAPPC4Q9Y296 AL365205.2-201ENST00000594586 68 ntBASIC0.33□□□□□ -2.36
TRAPPC4Q9Y296 AC008608.1-201ENST00000603910 127 ntBASIC0.33□□□□□ -2.36
TRAPPC4Q9Y296 AC011921.3-201ENST00000605540 361 ntBASIC0.33□□□□□ -2.36
TRAPPC4Q9Y296 AC243829.6-201ENST00000612652 106 ntBASIC0.33□□□□□ -2.36
TRAPPC4Q9Y296 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.32□□□□□ -2.36
TRAPPC4Q9Y296 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.32□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-103P-201ENST00000363686 107 ntBASIC0.32□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-342P-201ENST00000384521 104 ntBASIC0.32□□□□□ -2.36
TRAPPC4Q9Y296 RNA5SP193-201ENST00000410353 107 ntBASIC0.32□□□□□ -2.36
TRAPPC4Q9Y296 RNA5SP261-201ENST00000410536 106 ntBASIC0.32□□□□□ -2.36
TRAPPC4Q9Y296 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAPPC4Q9Y296 RNU7-102P-201ENST00000458948 62 ntBASIC0.32□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-1132P-201ENST00000459214 107 ntBASIC0.32□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-561P-201ENST00000516222 102 ntBASIC0.32□□□□□ -2.36
TRAPPC4Q9Y296 AC006504.6-201ENST00000590142 199 ntBASIC0.32□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-238P-201ENST00000363313 106 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.176-201ENST00000363815 109 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.262-201ENST00000364641 102 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-728P-201ENST00000365375 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.351-201ENST00000365436 96 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.416-201ENST00000384014 113 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.430-201ENST00000384081 110 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-364P-201ENST00000384387 107 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-1319P-201ENST00000390855 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-747P-201ENST00000390928 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-241P-201ENST00000391148 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-447P-201ENST00000410293 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-1118P-201ENST00000410382 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-1076P-201ENST00000410397 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-355P-201ENST00000410427 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-791P-201ENST00000410467 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-705P-201ENST00000410601 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-1100P-201ENST00000410691 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-860P-201ENST00000410860 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-1217P-201ENST00000411276 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-785P-201ENST00000411324 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU7-80P-201ENST00000459562 61 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 RNU7-156P-201ENST00000517214 74 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 MIR4643-201ENST00000577473 78 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 MIR3129-201ENST00000581095 76 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 U6.90-201ENST00000614007 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 U6.70-201ENST00000620287 104 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 AC091932.4-201ENST00000623386 200 ntBASIC0.31□□□□□ -2.36
TRAPPC4Q9Y296 AL589743.1-201ENST00000551932 2712 ntBASIC0.3□□□□□ -2.36
TRAPPC4Q9Y296 MIR302B-201ENST00000362188 73 ntBASIC0.3□□□□□ -2.36
TRAPPC4Q9Y296 MIR342-201ENST00000362212 99 ntBASIC0.3□□□□□ -2.36
TRAPPC4Q9Y296 VTRNA1-3-201ENST00000365645 89 ntBASIC0.3□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.454-201ENST00000384224 113 ntBASIC0.3□□□□□ -2.36
TRAPPC4Q9Y296 SNORA79-201ENST00000408376 140 ntBASIC0.3□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.618-201ENST00000410949 107 ntBASIC0.3□□□□□ -2.36
TRAPPC4Q9Y296 RNU7-45P-201ENST00000459460 63 ntBASIC0.3□□□□□ -2.36
TRAPPC4Q9Y296 AL162730.1-201ENST00000605734 292 ntBASIC0.3□□□□□ -2.36
TRAPPC4Q9Y296 AL442067.1-201ENST00000613261 223 ntBASIC0.3□□□□□ -2.36
TRAPPC4Q9Y296 MIRLET7D-201ENST00000362263 87 ntBASIC0.29□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.76-201ENST00000362931 109 ntBASIC0.29□□□□□ -2.36
TRAPPC4Q9Y296 AL117187.1-201ENST00000555482 181 ntBASIC0.29□□□□□ -2.36
TRAPPC4Q9Y296 MIR6515-201ENST00000619843 57 ntBASIC0.29□□□□□ -2.36
TRAPPC4Q9Y296 AC092634.7-201ENST00000621022 103 ntBASIC0.29□□□□□ -2.36
TRAPPC4Q9Y296 MIR6841-201ENST00000637129 72 ntBASIC0.29□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.145-201ENST00000363527 102 ntBASIC0.28□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.396-201ENST00000383949 103 ntBASIC0.28□□□□□ -2.36
TRAPPC4Q9Y296 snoU13.18-201ENST00000459483 104 ntBASIC0.28□□□□□ -2.36
TRAPPC4Q9Y296 RNA5SP436-201ENST00000516020 115 ntBASIC0.28□□□□□ -2.36
TRAPPC4Q9Y296 RNU6-448P-201ENST00000517052 107 ntBASIC0.28□□□□□ -2.36
TRAPPC4Q9Y296 AL662814.1-201ENST00000617364 121 ntBASIC0.28□□□□□ -2.36
TRAPPC4Q9Y296 Y_RNA.42-201ENST00000362660 108 ntBASIC0.27□□□□□ -2.37
TRAPPC4Q9Y296 RNU6-978P-201ENST00000364371 103 ntBASIC0.27□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.277-201ENST00000364754 102 ntBASIC0.27□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.292-201ENST00000364904 97 ntBASIC0.27□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.355-201ENST00000365462 98 ntBASIC0.27□□□□□ -2.37
TRAPPC4Q9Y296 MIR606-201ENST00000384851 96 ntBASIC0.27□□□□□ -2.37
TRAPPC4Q9Y296 RNA5SP94-201ENST00000516917 108 ntBASIC0.27□□□□□ -2.37
TRAPPC4Q9Y296 MIR4744-201ENST00000581563 82 ntBASIC0.27□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.812-201ENST00000610788 101 ntBASIC0.27□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.784-201ENST00000613803 101 ntBASIC0.27□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.787-201ENST00000616522 101 ntBASIC0.27□□□□□ -2.37
TRAPPC4Q9Y296 MIR8066-201ENST00000617280 78 ntBASIC0.27□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.780-201ENST00000617336 101 ntBASIC0.27□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.801-201ENST00000619005 101 ntBASIC0.27□□□□□ -2.37
TRAPPC4Q9Y296 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
TRAPPC4Q9Y296 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
TRAPPC4Q9Y296 RNA5SP517-201ENST00000364724 117 ntBASIC0.26□□□□□ -2.37
TRAPPC4Q9Y296 RNU6-597P-201ENST00000365620 102 ntBASIC0.26□□□□□ -2.37
TRAPPC4Q9Y296 Y_RNA.562-201ENST00000384695 113 ntBASIC0.26□□□□□ -2.37
TRAPPC4Q9Y296 MIR216A-201ENST00000385063 110 ntBASIC0.26□□□□□ -2.37
TRAPPC4Q9Y296 MIR3152-201ENST00000579801 74 ntBASIC0.26□□□□□ -2.37
TRAPPC4Q9Y296 AL596211.1-201ENST00000569873 2277 ntBASIC0.26□□□□□ -2.37
TRAPPC4Q9Y296 SNORA63-201ENST00000363450 132 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 RNY4P28-201ENST00000365281 93 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 RNU6-738P-201ENST00000384531 106 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 MIR518A1-201ENST00000385068 85 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 RNU6-578P-201ENST00000390980 103 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 MIR548H3-201ENST00000408771 118 ntBASIC0.25□□□□□ -2.37
TRAPPC4Q9Y296 SNORD93-201ENST00000408813 74 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 276 ms