Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 AC141273.2-201ENST00000618989 130 ntBASIC0.78□□□□□ -2.28
Q9N2K0 MIR342-201ENST00000362212 99 ntBASIC0.77□□□□□ -2.29
Q9N2K0 RNU6-312P-201ENST00000364629 107 ntBASIC0.77□□□□□ -2.29
Q9N2K0 RNU6-597P-201ENST00000365620 102 ntBASIC0.77□□□□□ -2.29
Q9N2K0 Y_RNA.412-201ENST00000384001 104 ntBASIC0.77□□□□□ -2.29
Q9N2K0 MIR489-201ENST00000384923 84 ntBASIC0.77□□□□□ -2.29
Q9N2K0 snosnR66.1-201ENST00000391095 99 ntBASIC0.77□□□□□ -2.29
Q9N2K0 RNU6-602P-201ENST00000411155 105 ntBASIC0.77□□□□□ -2.29
Q9N2K0 AC090844.1-201ENST00000422019 156 ntBASIC0.77□□□□□ -2.29
Q9N2K0 MIR4431-201ENST00000579990 94 ntBASIC0.77□□□□□ -2.29
Q9N2K0 SNORA4-201ENST00000584302 138 ntBASIC0.77□□□□□ -2.29
Q9N2K0 AL353765.1-201ENST00000605514 183 ntBASIC0.77□□□□□ -2.29
Q9N2K0 AC091932.4-201ENST00000623386 200 ntBASIC0.77□□□□□ -2.29
Q9N2K0 U6.106-201ENST00000636360 105 ntBASIC0.77□□□□□ -2.29
Q9N2K0 MIR376A2-201ENST00000636782 80 ntBASIC0.77□□□□□ -2.29
Q9N2K0 RNU6-934P-201ENST00000365154 107 ntBASIC0.76□□□□□ -2.29
Q9N2K0 MIR100-201ENST00000385259 80 ntBASIC0.76□□□□□ -2.29
Q9N2K0 RPS26P5-201ENST00000418544 335 ntBASIC0.76□□□□□ -2.29
Q9N2K0 MIR18B-201ENST00000454574 71 ntBASIC0.76□□□□□ -2.29
Q9N2K0 ACA64.5-201ENST00000516207 127 ntBASIC0.76□□□□□ -2.29
Q9N2K0 RNU6-1271P-201ENST00000517049 105 ntBASIC0.76□□□□□ -2.29
Q9N2K0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.76□□□□□ -2.29
Q9N2K0 MIR6717-201ENST00000622747 73 ntBASIC0.76□□□□□ -2.29
Q9N2K0 RNU1-133P-201ENST00000364867 167 ntBASIC0.75□□□□□ -2.29
Q9N2K0 Y_RNA.430-201ENST00000384081 110 ntBASIC0.75□□□□□ -2.29
Q9N2K0 RNU6-42P-201ENST00000384165 107 ntBASIC0.75□□□□□ -2.29
Q9N2K0 SNORA20-201ENST00000384662 132 ntBASIC0.75□□□□□ -2.29
Q9N2K0 Y_RNA.552-201ENST00000384665 112 ntBASIC0.75□□□□□ -2.29
Q9N2K0 AC006461.1-201ENST00000412637 326 ntBASIC0.75□□□□□ -2.29
Q9N2K0 HMGN1P33-201ENST00000432945 451 ntBASIC0.75□□□□□ -2.29
Q9N2K0 RNA5SP220-201ENST00000516298 104 ntBASIC0.75□□□□□ -2.29
Q9N2K0 AC130289.1-201ENST00000577321 73 ntBASIC0.75□□□□□ -2.29
Q9N2K0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
Q9N2K0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Q9N2K0 RNU6-110P-201ENST00000384508 104 ntBASIC0.74□□□□□ -2.29
Q9N2K0 Y_RNA.521-201ENST00000384560 114 ntBASIC0.74□□□□□ -2.29
Q9N2K0 SNORD105-201ENST00000386910 85 ntBASIC0.74□□□□□ -2.29
Q9N2K0 RNU6-1319P-201ENST00000390855 104 ntBASIC0.74□□□□□ -2.29
Q9N2K0 RNU6-747P-201ENST00000390928 104 ntBASIC0.74□□□□□ -2.29
Q9N2K0 RNU6-241P-201ENST00000391148 104 ntBASIC0.74□□□□□ -2.29
Q9N2K0 SNORA26.6-201ENST00000391256 115 ntBASIC0.74□□□□□ -2.29
Q9N2K0 RNU6-177P-201ENST00000411257 104 ntBASIC0.74□□□□□ -2.29
Q9N2K0 SEPT7P4-201ENST00000437076 306 ntBASIC0.74□□□□□ -2.29
Q9N2K0 RNU6-893P-201ENST00000458841 100 ntBASIC0.74□□□□□ -2.29
Q9N2K0 snoU13.2-201ENST00000459201 104 ntBASIC0.74□□□□□ -2.29
Q9N2K0 RPS29P1-201ENST00000465274 159 ntBASIC0.74□□□□□ -2.29
Q9N2K0 AC107027.2-201ENST00000512197 115 ntBASIC0.74□□□□□ -2.29
Q9N2K0 AC072026.1-201ENST00000605023 201 ntBASIC0.74□□□□□ -2.29
Q9N2K0 AL596211.1-201ENST00000569873 2277 ntBASIC0.74□□□□□ -2.29
Q9N2K0 Y_RNA.233-201ENST00000364407 101 ntBASIC0.73□□□□□ -2.29
Q9N2K0 RNU1-93P-201ENST00000364704 169 ntBASIC0.73□□□□□ -2.29
Q9N2K0 Y_RNA.476-201ENST00000384347 108 ntBASIC0.73□□□□□ -2.29
Q9N2K0 MIR520E-201ENST00000384867 87 ntBASIC0.73□□□□□ -2.29
Q9N2K0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.73□□□□□ -2.29
Q9N2K0 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
Q9N2K0 AC013244.2-201ENST00000603396 103 ntBASIC0.73□□□□□ -2.29
Q9N2K0 RMST_2.1-201ENST00000617263 136 ntBASIC0.73□□□□□ -2.29
Q9N2K0 MIR6740-201ENST00000618268 113 ntBASIC0.73□□□□□ -2.29
Q9N2K0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.73□□□□□ -2.29
Q9N2K0 RNU6-379P-201ENST00000363813 104 ntBASIC0.72□□□□□ -2.29
Q9N2K0 Y_RNA.337-201ENST00000365312 102 ntBASIC0.72□□□□□ -2.29
Q9N2K0 Y_RNA.393-201ENST00000383936 102 ntBASIC0.72□□□□□ -2.29
Q9N2K0 MIR588-201ENST00000384900 83 ntBASIC0.72□□□□□ -2.29
Q9N2K0 MIR532-201ENST00000385025 91 ntBASIC0.72□□□□□ -2.29
Q9N2K0 MT-TF-201ENST00000387314 71 ntBASIC0.72□□□□□ -2.29
Q9N2K0 RNU6-1190P-201ENST00000410811 104 ntBASIC0.72□□□□□ -2.29
Q9N2K0 Y_RNA.644-201ENST00000459006 113 ntBASIC0.72□□□□□ -2.29
Q9N2K0 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
Q9N2K0 Y_RNA.674-201ENST00000516362 113 ntBASIC0.72□□□□□ -2.29
Q9N2K0 AC104465.1-201ENST00000611365 139 ntBASIC0.72□□□□□ -2.29
Q9N2K0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
Q9N2K0 SNORD114-2-201ENST00000363953 78 ntBASIC0.71□□□□□ -2.3
Q9N2K0 Y_RNA.297-201ENST00000364950 91 ntBASIC0.71□□□□□ -2.3
Q9N2K0 RNU6-47P-201ENST00000383866 107 ntBASIC0.71□□□□□ -2.3
Q9N2K0 MIR563-201ENST00000385080 79 ntBASIC0.71□□□□□ -2.3
Q9N2K0 SNORD99-201ENST00000408612 74 ntBASIC0.71□□□□□ -2.3
Q9N2K0 RNU6-1165P-201ENST00000410119 107 ntBASIC0.71□□□□□ -2.3
Q9N2K0 SNORD83.1-201ENST00000411362 77 ntBASIC0.71□□□□□ -2.3
Q9N2K0 RNU6-977P-201ENST00000516411 103 ntBASIC0.71□□□□□ -2.3
Q9N2K0 Y_RNA.700-201ENST00000516806 100 ntBASIC0.71□□□□□ -2.3
Q9N2K0 SCARNA15-202ENST00000516881 127 ntBASIC0.71□□□□□ -2.3
Q9N2K0 MIR4771-2-201ENST00000577758 74 ntBASIC0.71□□□□□ -2.3
Q9N2K0 MIR4771-1-201ENST00000582617 74 ntBASIC0.71□□□□□ -2.3
Q9N2K0 FAM71BP1-201ENST00000604431 523 ntBASIC0.71□□□□□ -2.3
Q9N2K0 MIR6767-201ENST00000637302 66 ntBASIC0.71□□□□□ -2.3
Q9N2K0 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
Q9N2K0 RNU6-369P-201ENST00000362515 102 ntBASIC0.7□□□□□ -2.3
Q9N2K0 RNU6-1335P-201ENST00000365426 107 ntBASIC0.7□□□□□ -2.3
Q9N2K0 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
Q9N2K0 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
Q9N2K0 RNU6-1149P-201ENST00000516810 97 ntBASIC0.7□□□□□ -2.3
Q9N2K0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Q9N2K0 Y_RNA.274-201ENST00000364714 101 ntBASIC0.69□□□□□ -2.3
Q9N2K0 Y_RNA.357-201ENST00000365487 109 ntBASIC0.69□□□□□ -2.3
Q9N2K0 MIR605-201ENST00000385078 83 ntBASIC0.69□□□□□ -2.3
Q9N2K0 Y_RNA.793-201ENST00000411222 111 ntBASIC0.69□□□□□ -2.3
Q9N2K0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.69□□□□□ -2.3
Q9N2K0 snoU13.21-201ENST00000459368 105 ntBASIC0.69□□□□□ -2.3
Q9N2K0 MIR3646-201ENST00000578301 84 ntBASIC0.69□□□□□ -2.3
Q9N2K0 MIR6857-201ENST00000613267 93 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms