Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 MIR548AE2-201ENST00000583456 67 ntBASIC2.35□□□□□ -2.03
CBX8Q9HC52 HMGN2P38-201ENST00000423806 265 ntBASIC2.34□□□□□ -2.03
CBX8Q9HC52 SUMO1P4-201ENST00000429430 302 ntBASIC2.34□□□□□ -2.03
CBX8Q9HC52 HMGN1P33-201ENST00000432945 451 ntBASIC2.34□□□□□ -2.03
CBX8Q9HC52 RNA5SP33-201ENST00000516687 98 ntBASIC2.34□□□□□ -2.03
CBX8Q9HC52 MIR4764-201ENST00000580680 88 ntBASIC2.34□□□□□ -2.03
CBX8Q9HC52 MIR203B-201ENST00000636080 86 ntBASIC2.34□□□□□ -2.03
CBX8Q9HC52 RNU6-1099P-201ENST00000363533 107 ntBASIC2.33□□□□□ -2.04
CBX8Q9HC52 RNU4-52P-201ENST00000384209 138 ntBASIC2.33□□□□□ -2.04
CBX8Q9HC52 Y_RNA.507-201ENST00000384500 99 ntBASIC2.33□□□□□ -2.04
CBX8Q9HC52 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.33□□□□□ -2.04
CBX8Q9HC52 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.33□□□□□ -2.04
CBX8Q9HC52 MIR5194-201ENST00000582634 120 ntBASIC2.33□□□□□ -2.04
CBX8Q9HC52 MIR4448-201ENST00000584360 86 ntBASIC2.33□□□□□ -2.04
CBX8Q9HC52 AC008133.2-201ENST00000624540 351 ntBASIC2.33□□□□□ -2.04
CBX8Q9HC52 RNA5SP276-201ENST00000362580 94 ntBASIC2.32□□□□□ -2.04
CBX8Q9HC52 RNU4-67P-201ENST00000364569 141 ntBASIC2.32□□□□□ -2.04
CBX8Q9HC52 AL353813.1-201ENST00000440700 253 ntBASIC2.32□□□□□ -2.04
CBX8Q9HC52 MIR3935-201ENST00000583472 104 ntBASIC2.32□□□□□ -2.04
CBX8Q9HC52 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
CBX8Q9HC52 MIR6132-201ENST00000622083 109 ntBASIC2.32□□□□□ -2.04
CBX8Q9HC52 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CBX8Q9HC52 Y_RNA.140-201ENST00000363474 103 ntBASIC2.31□□□□□ -2.04
CBX8Q9HC52 SNORA16B-201ENST00000364674 135 ntBASIC2.31□□□□□ -2.04
CBX8Q9HC52 MIR488-201ENST00000365739 83 ntBASIC2.31□□□□□ -2.04
CBX8Q9HC52 RNA5SP212-201ENST00000391223 107 ntBASIC2.31□□□□□ -2.04
CBX8Q9HC52 AL023284.1-201ENST00000403956 276 ntBASIC2.31□□□□□ -2.04
CBX8Q9HC52 RPS3AP1-201ENST00000413190 320 ntBASIC2.31□□□□□ -2.04
CBX8Q9HC52 Z98742.3-201ENST00000418637 326 ntBASIC2.31□□□□□ -2.04
CBX8Q9HC52 MTATP8P2-201ENST00000435212 202 ntBASIC2.31□□□□□ -2.04
CBX8Q9HC52 RNA5SP57-201ENST00000459463 123 ntBASIC2.31□□□□□ -2.04
CBX8Q9HC52 DEFB131E-201ENST00000532329 154 ntBASIC2.31□□□□□ -2.04
CBX8Q9HC52 MIR4781-201ENST00000585250 76 ntBASIC2.31□□□□□ -2.04
CBX8Q9HC52 Z97988.1-201ENST00000637697 135 ntBASIC2.31□□□□□ -2.04
CBX8Q9HC52 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CBX8Q9HC52 Y_RNA.360-201ENST00000365512 102 ntBASIC2.3□□□□□ -2.04
CBX8Q9HC52 SNORA6-201ENST00000384033 151 ntBASIC2.3□□□□□ -2.04
CBX8Q9HC52 RNU6-49P-201ENST00000384256 107 ntBASIC2.3□□□□□ -2.04
CBX8Q9HC52 RNU6-616P-201ENST00000384353 107 ntBASIC2.3□□□□□ -2.04
CBX8Q9HC52 MIR489-201ENST00000384923 84 ntBASIC2.3□□□□□ -2.04
CBX8Q9HC52 MIR577-201ENST00000385196 96 ntBASIC2.3□□□□□ -2.04
CBX8Q9HC52 RNU6-733P-201ENST00000410759 104 ntBASIC2.3□□□□□ -2.04
CBX8Q9HC52 RNA5SP364-201ENST00000516938 78 ntBASIC2.3□□□□□ -2.04
CBX8Q9HC52 AC022254.1-201ENST00000567857 235 ntBASIC2.3□□□□□ -2.04
CBX8Q9HC52 MIR4694-201ENST00000578534 80 ntBASIC2.3□□□□□ -2.04
CBX8Q9HC52 MIR8065-201ENST00000620577 100 ntBASIC2.3□□□□□ -2.04
CBX8Q9HC52 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.3□□□□□ -2.04
CBX8Q9HC52 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CBX8Q9HC52 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
CBX8Q9HC52 RNY3P2-201ENST00000362918 102 ntBASIC2.29□□□□□ -2.04
CBX8Q9HC52 Y_RNA.155-201ENST00000363632 101 ntBASIC2.29□□□□□ -2.04
CBX8Q9HC52 SNORA1.1-201ENST00000364671 133 ntBASIC2.29□□□□□ -2.04
CBX8Q9HC52 RNU6-1131P-201ENST00000364955 107 ntBASIC2.29□□□□□ -2.04
CBX8Q9HC52 RNU6-409P-201ENST00000384114 104 ntBASIC2.29□□□□□ -2.04
CBX8Q9HC52 MIR520C-201ENST00000385005 87 ntBASIC2.29□□□□□ -2.04
CBX8Q9HC52 MIR524-201ENST00000385242 87 ntBASIC2.29□□□□□ -2.04
CBX8Q9HC52 JTBP1-201ENST00000441314 247 ntBASIC2.29□□□□□ -2.04
CBX8Q9HC52 RNU6-970P-201ENST00000516312 107 ntBASIC2.29□□□□□ -2.04
CBX8Q9HC52 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.29□□□□□ -2.04
CBX8Q9HC52 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
CBX8Q9HC52 Y_RNA.93-201ENST00000363066 109 ntBASIC2.28□□□□□ -2.04
CBX8Q9HC52 RNU4-36P-201ENST00000364294 144 ntBASIC2.28□□□□□ -2.04
CBX8Q9HC52 SNORA67.1-201ENST00000364749 141 ntBASIC2.28□□□□□ -2.04
CBX8Q9HC52 RNU6-439P-201ENST00000384188 106 ntBASIC2.28□□□□□ -2.04
CBX8Q9HC52 MIR605-201ENST00000385078 83 ntBASIC2.28□□□□□ -2.04
CBX8Q9HC52 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CBX8Q9HC52 RNU6-679P-201ENST00000391003 106 ntBASIC2.28□□□□□ -2.04
CBX8Q9HC52 SNORD77B-201ENST00000391112 67 ntBASIC2.28□□□□□ -2.04
CBX8Q9HC52 SNORA72.7-201ENST00000516349 94 ntBASIC2.28□□□□□ -2.04
CBX8Q9HC52 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CBX8Q9HC52 MIR518E-201ENST00000385252 88 ntBASIC2.27□□□□□ -2.05
CBX8Q9HC52 SUMO2P12-201ENST00000405924 140 ntBASIC2.27□□□□□ -2.05
CBX8Q9HC52 Y_RNA.601-201ENST00000410500 113 ntBASIC2.27□□□□□ -2.05
CBX8Q9HC52 RNU4-53P-201ENST00000410828 140 ntBASIC2.27□□□□□ -2.05
CBX8Q9HC52 SCARNA23-201ENST00000516060 130 ntBASIC2.27□□□□□ -2.05
CBX8Q9HC52 MIR548AO-201ENST00000579992 96 ntBASIC2.27□□□□□ -2.05
CBX8Q9HC52 MIR5694-201ENST00000581190 76 ntBASIC2.27□□□□□ -2.05
CBX8Q9HC52 AL773524.1-201ENST00000614065 229 ntBASIC2.27□□□□□ -2.05
CBX8Q9HC52 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.27□□□□□ -2.05
CBX8Q9HC52 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.27□□□□□ -2.05
CBX8Q9HC52 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.27□□□□□ -2.05
CBX8Q9HC52 MIR337-201ENST00000362281 93 ntBASIC2.26□□□□□ -2.05
CBX8Q9HC52 RNU6-832P-201ENST00000363319 107 ntBASIC2.26□□□□□ -2.05
CBX8Q9HC52 SNORA32-201ENST00000384072 121 ntBASIC2.26□□□□□ -2.05
CBX8Q9HC52 MIR513A1-201ENST00000385138 129 ntBASIC2.26□□□□□ -2.05
CBX8Q9HC52 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CBX8Q9HC52 RNU6-602P-201ENST00000411155 105 ntBASIC2.26□□□□□ -2.05
CBX8Q9HC52 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.26□□□□□ -2.05
CBX8Q9HC52 snoU13.18-201ENST00000459483 104 ntBASIC2.26□□□□□ -2.05
CBX8Q9HC52 RNU7-41P-201ENST00000515917 61 ntBASIC2.26□□□□□ -2.05
CBX8Q9HC52 MIR4498-201ENST00000577599 66 ntBASIC2.26□□□□□ -2.05
CBX8Q9HC52 MIR2052-201ENST00000636055 55 ntBASIC2.26□□□□□ -2.05
CBX8Q9HC52 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.26□□□□□ -2.05
CBX8Q9HC52 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
CBX8Q9HC52 Y_RNA.107-201ENST00000363190 121 ntBASIC2.25□□□□□ -2.05
CBX8Q9HC52 RNU6-342P-201ENST00000384521 104 ntBASIC2.25□□□□□ -2.05
CBX8Q9HC52 SNORD41-201ENST00000386967 70 ntBASIC2.25□□□□□ -2.05
CBX8Q9HC52 SNORA7.5-201ENST00000410672 110 ntBASIC2.25□□□□□ -2.05
CBX8Q9HC52 RNU6-322P-201ENST00000516010 103 ntBASIC2.25□□□□□ -2.05
CBX8Q9HC52 SNORA77B-201ENST00000578179 125 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms