Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 SNORD92-201ENST00000585078 85 ntBASIC0.3□□□□□ -2.36
RPAP3Q9H6T3 SNORA25.18-201ENST00000607153 114 ntBASIC0.3□□□□□ -2.36
RPAP3Q9H6T3 RNU4-67P-201ENST00000364569 141 ntBASIC0.29□□□□□ -2.36
RPAP3Q9H6T3 Y_RNA.304-201ENST00000365011 112 ntBASIC0.29□□□□□ -2.36
RPAP3Q9H6T3 RNU6-1189P-201ENST00000383958 107 ntBASIC0.29□□□□□ -2.36
RPAP3Q9H6T3 Y_RNA.410-201ENST00000383992 113 ntBASIC0.29□□□□□ -2.36
RPAP3Q9H6T3 Y_RNA.440-201ENST00000384120 114 ntBASIC0.29□□□□□ -2.36
RPAP3Q9H6T3 Y_RNA.535-201ENST00000384612 99 ntBASIC0.29□□□□□ -2.36
RPAP3Q9H6T3 RNA5SP127-201ENST00000411051 133 ntBASIC0.29□□□□□ -2.36
RPAP3Q9H6T3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.29□□□□□ -2.36
RPAP3Q9H6T3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.29□□□□□ -2.36
RPAP3Q9H6T3 MIR30D-201ENST00000362283 70 ntBASIC0.28□□□□□ -2.36
RPAP3Q9H6T3 RNU6-1203P-201ENST00000410703 110 ntBASIC0.28□□□□□ -2.36
RPAP3Q9H6T3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.28□□□□□ -2.36
RPAP3Q9H6T3 RNA5SP94-201ENST00000516917 108 ntBASIC0.28□□□□□ -2.36
RPAP3Q9H6T3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.28□□□□□ -2.36
RPAP3Q9H6T3 AP001094.1-201ENST00000579805 193 ntBASIC0.28□□□□□ -2.36
RPAP3Q9H6T3 AP001282.2-201ENST00000616149 309 ntBASIC0.28□□□□□ -2.36
RPAP3Q9H6T3 MIR376A2-201ENST00000636782 80 ntBASIC0.28□□□□□ -2.36
RPAP3Q9H6T3 MIR302B-201ENST00000362188 73 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 Y_RNA.61-201ENST00000362835 102 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 RNA5SP257-201ENST00000363023 116 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 SNORD44.1-201ENST00000363202 61 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 Y_RNA.199-201ENST00000364014 102 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 snoU2_19.4-201ENST00000364329 80 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 RNU6-740P-201ENST00000364734 105 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 Y_RNA.351-201ENST00000365436 96 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 Y_RNA.432-201ENST00000384087 111 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 Y_RNA.512-201ENST00000384518 102 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 MIR518A1-201ENST00000385068 85 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 MT-TF-201ENST00000387314 71 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 Y_RNA.617-201ENST00000410920 90 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 RNA5SP153-201ENST00000516498 76 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 AC020661.2-201ENST00000560114 134 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 MIR3678-201ENST00000578455 94 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 MIR6718-201ENST00000616153 80 ntBASIC0.27□□□□□ -2.37
RPAP3Q9H6T3 Y_RNA.23-201ENST00000362496 106 ntBASIC0.26□□□□□ -2.37
RPAP3Q9H6T3 RNU5E-4P-201ENST00000364931 120 ntBASIC0.26□□□□□ -2.37
RPAP3Q9H6T3 RNA5SP117-201ENST00000365294 118 ntBASIC0.26□□□□□ -2.37
RPAP3Q9H6T3 RNY3P5-201ENST00000384127 102 ntBASIC0.26□□□□□ -2.37
RPAP3Q9H6T3 SNORA26.6-201ENST00000391256 115 ntBASIC0.26□□□□□ -2.37
RPAP3Q9H6T3 AL606845.1-201ENST00000404881 255 ntBASIC0.26□□□□□ -2.37
RPAP3Q9H6T3 SNORD93-201ENST00000408813 74 ntBASIC0.26□□□□□ -2.37
RPAP3Q9H6T3 SNORA40.8-201ENST00000411034 126 ntBASIC0.26□□□□□ -2.37
RPAP3Q9H6T3 AC113618.1-201ENST00000416747 285 ntBASIC0.26□□□□□ -2.37
RPAP3Q9H6T3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.26□□□□□ -2.37
RPAP3Q9H6T3 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
RPAP3Q9H6T3 AC097639.2-201ENST00000603159 172 ntBASIC0.26□□□□□ -2.37
RPAP3Q9H6T3 MIR6717-201ENST00000622747 73 ntBASIC0.26□□□□□ -2.37
RPAP3Q9H6T3 RNU6-867P-201ENST00000364956 107 ntBASIC0.25□□□□□ -2.37
RPAP3Q9H6T3 RNA5SP63-201ENST00000391225 112 ntBASIC0.25□□□□□ -2.37
RPAP3Q9H6T3 SNRPGP12-201ENST00000449481 213 ntBASIC0.25□□□□□ -2.37
RPAP3Q9H6T3 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
RPAP3Q9H6T3 RNU6-561P-201ENST00000516222 102 ntBASIC0.25□□□□□ -2.37
RPAP3Q9H6T3 RNU6-448P-201ENST00000517052 107 ntBASIC0.25□□□□□ -2.37
RPAP3Q9H6T3 AC022523.2-201ENST00000561045 150 ntBASIC0.25□□□□□ -2.37
RPAP3Q9H6T3 MIR3129-201ENST00000581095 76 ntBASIC0.25□□□□□ -2.37
RPAP3Q9H6T3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.25□□□□□ -2.37
RPAP3Q9H6T3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
RPAP3Q9H6T3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
RPAP3Q9H6T3 Y_RNA.44-201ENST00000362676 108 ntBASIC0.24□□□□□ -2.37
RPAP3Q9H6T3 Y_RNA.237-201ENST00000364439 102 ntBASIC0.24□□□□□ -2.37
RPAP3Q9H6T3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
RPAP3Q9H6T3 Y_RNA.567-201ENST00000384736 106 ntBASIC0.24□□□□□ -2.37
RPAP3Q9H6T3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.24□□□□□ -2.37
RPAP3Q9H6T3 SNORD71-201ENST00000411292 86 ntBASIC0.24□□□□□ -2.37
RPAP3Q9H6T3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.24□□□□□ -2.37
RPAP3Q9H6T3 AC133485.4-201ENST00000561835 220 ntBASIC0.24□□□□□ -2.37
RPAP3Q9H6T3 Y_RNA.251-201ENST00000364551 99 ntBASIC0.23□□□□□ -2.37
RPAP3Q9H6T3 MIR644A-201ENST00000385262 94 ntBASIC0.23□□□□□ -2.37
RPAP3Q9H6T3 AL596211.1-201ENST00000569873 2277 ntBASIC0.23□□□□□ -2.37
RPAP3Q9H6T3 MIR616-201ENST00000385293 97 ntBASIC0.22□□□□□ -2.37
RPAP3Q9H6T3 RNU4-83P-201ENST00000410863 133 ntBASIC0.22□□□□□ -2.37
RPAP3Q9H6T3 SNORD2.1-201ENST00000458762 69 ntBASIC0.22□□□□□ -2.37
RPAP3Q9H6T3 uc_338.16-201ENST00000621804 95 ntBASIC0.22□□□□□ -2.37
RPAP3Q9H6T3 RNU6-349P-201ENST00000362402 107 ntBASIC0.21□□□□□ -2.38
RPAP3Q9H6T3 RNU6-653P-201ENST00000363074 106 ntBASIC0.21□□□□□ -2.38
RPAP3Q9H6T3 RNU6-403P-201ENST00000363163 104 ntBASIC0.21□□□□□ -2.38
RPAP3Q9H6T3 RNA5SP62-201ENST00000363457 110 ntBASIC0.21□□□□□ -2.38
RPAP3Q9H6T3 SNORD118-201ENST00000363593 134 ntBASIC0.21□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.202-201ENST00000364083 110 ntBASIC0.21□□□□□ -2.38
RPAP3Q9H6T3 SNORA8.2-201ENST00000384372 139 ntBASIC0.21□□□□□ -2.38
RPAP3Q9H6T3 RNU6-985P-201ENST00000410182 104 ntBASIC0.21□□□□□ -2.38
RPAP3Q9H6T3 RNA5SP237-201ENST00000410414 113 ntBASIC0.21□□□□□ -2.38
RPAP3Q9H6T3 RNA5SP261-201ENST00000410536 106 ntBASIC0.21□□□□□ -2.38
RPAP3Q9H6T3 SEPT7P4-201ENST00000437076 306 ntBASIC0.21□□□□□ -2.38
RPAP3Q9H6T3 RPL39P25-201ENST00000449384 154 ntBASIC0.21□□□□□ -2.38
RPAP3Q9H6T3 TRBVB-201ENST00000477100 408 ntBASIC0.21□□□□□ -2.38
RPAP3Q9H6T3 AL442663.2-201ENST00000554385 511 ntBASIC0.21□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.13-201ENST00000362403 112 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.42-201ENST00000362660 108 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.82-201ENST00000363000 102 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.92-201ENST00000363043 102 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.235-201ENST00000364412 102 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.306-201ENST00000365015 102 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.312-201ENST00000365089 102 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.322-201ENST00000365151 102 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.650-201ENST00000459002 102 ntBASIC0.2□□□□□ -2.38
RPAP3Q9H6T3 Y_RNA.777-201ENST00000516982 102 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms