Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MIR526A1-201ENST00000384897 85 ntBASIC1.97□□□□□ -2.09
SSBP3Q9BWW4 Y_RNA.611-201ENST00000410682 108 ntBASIC1.97□□□□□ -2.09
SSBP3Q9BWW4 AL445685.2-201ENST00000422551 342 ntBASIC1.97□□□□□ -2.09
SSBP3Q9BWW4 snoU13.27-201ENST00000459278 104 ntBASIC1.97□□□□□ -2.09
SSBP3Q9BWW4 UBL5P1-201ENST00000507979 193 ntBASIC1.97□□□□□ -2.09
SSBP3Q9BWW4 FAM106DP-201ENST00000586416 501 ntBASIC1.97□□□□□ -2.09
SSBP3Q9BWW4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SSBP3Q9BWW4 AC016717.2-201ENST00000609089 5141 ntBASIC1.97□□□□□ -2.09
SSBP3Q9BWW4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SSBP3Q9BWW4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SSBP3Q9BWW4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.96□□□□□ -2.1
SSBP3Q9BWW4 Y_RNA.221-201ENST00000364248 96 ntBASIC1.96□□□□□ -2.1
SSBP3Q9BWW4 Y_RNA.313-201ENST00000365095 103 ntBASIC1.96□□□□□ -2.1
SSBP3Q9BWW4 SNORA48.1-201ENST00000390879 135 ntBASIC1.96□□□□□ -2.1
SSBP3Q9BWW4 MIR1283-2-201ENST00000408621 87 ntBASIC1.96□□□□□ -2.1
SSBP3Q9BWW4 HMGN1P33-201ENST00000432945 451 ntBASIC1.96□□□□□ -2.1
SSBP3Q9BWW4 RPL23AP6-201ENST00000446637 472 ntBASIC1.96□□□□□ -2.1
SSBP3Q9BWW4 AC046143.2-201ENST00000609789 160 ntBASIC1.96□□□□□ -2.1
SSBP3Q9BWW4 MIR8055-201ENST00000610739 97 ntBASIC1.96□□□□□ -2.1
SSBP3Q9BWW4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.96□□□□□ -2.1
SSBP3Q9BWW4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SSBP3Q9BWW4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.96□□□□□ -2.1
SSBP3Q9BWW4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 RNU6-1125P-201ENST00000363601 107 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 Y_RNA.247-201ENST00000364500 92 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 RNU6-1163P-201ENST00000364516 107 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 RNU6-865P-201ENST00000364772 107 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 RNU6-342P-201ENST00000384521 104 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 MIR518A2-201ENST00000384966 87 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 RN7SL429P-201ENST00000479090 223 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 RN7SL489P-201ENST00000486185 223 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 RN7SL327P-201ENST00000488659 223 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 RNU6-857P-201ENST00000515893 110 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 SNORA74.3-201ENST00000517108 154 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 RNU7-35P-201ENST00000517174 62 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 RNA5SP437-201ENST00000517249 129 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 MIR5694-201ENST00000581190 76 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 MIR4658-201ENST00000584344 65 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 MIR4298-201ENST00000584380 73 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 AC067747.1-201ENST00000608026 250 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 RN7SL853P-201ENST00000617250 223 ntBASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SSBP3Q9BWW4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-1296P-201ENST00000383879 107 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-24P-201ENST00000384440 107 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-447P-201ENST00000410293 104 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNA5SP425-201ENST00000410336 112 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-1118P-201ENST00000410382 104 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-1076P-201ENST00000410397 104 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-355P-201ENST00000410427 104 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-791P-201ENST00000410467 104 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-705P-201ENST00000410601 104 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-1100P-201ENST00000410691 104 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-860P-201ENST00000410860 104 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-1086P-201ENST00000410930 100 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-1217P-201ENST00000411276 104 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-785P-201ENST00000411324 104 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 AL356320.1-201ENST00000429616 163 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU7-43P-201ENST00000516554 64 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-1006P-201ENST00000516998 103 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 SUB1P4-201ENST00000566062 339 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 RNU6-90P-201ENST00000606352 106 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 U6.90-201ENST00000614007 104 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 U6.70-201ENST00000620287 104 ntBASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SSBP3Q9BWW4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SSBP3Q9BWW4 RNU6-509P-201ENST00000363519 107 ntBASIC1.93□□□□□ -2.1
SSBP3Q9BWW4 RNU6-112P-201ENST00000363599 104 ntBASIC1.93□□□□□ -2.1
SSBP3Q9BWW4 RNU1-51P-201ENST00000365345 176 ntBASIC1.93□□□□□ -2.1
SSBP3Q9BWW4 SNORD38.2-201ENST00000384470 69 ntBASIC1.93□□□□□ -2.1
SSBP3Q9BWW4 AL023284.1-201ENST00000403956 276 ntBASIC1.93□□□□□ -2.1
SSBP3Q9BWW4 Y_RNA.607-201ENST00000410597 98 ntBASIC1.93□□□□□ -2.1
SSBP3Q9BWW4 AC011753.1-201ENST00000451001 220 ntBASIC1.93□□□□□ -2.1
SSBP3Q9BWW4 AC019288.1-201ENST00000557918 224 ntBASIC1.93□□□□□ -2.1
SSBP3Q9BWW4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.93□□□□□ -2.1
SSBP3Q9BWW4 MIR6873-201ENST00000622788 63 ntBASIC1.93□□□□□ -2.1
SSBP3Q9BWW4 MIR548BB-201ENST00000626714 66 ntBASIC1.93□□□□□ -2.1
SSBP3Q9BWW4 ZNF658B-202ENST00000615961 3375 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 AC131280.1-202ENST00000624067 4211 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 MIR424-201ENST00000362227 98 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 RNU6-633P-201ENST00000362612 103 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 U8.2-201ENST00000363156 134 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 Y_RNA.448-201ENST00000384185 108 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 SNORA70B-201ENST00000384210 135 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 RNU6-296P-201ENST00000384608 107 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 Y_RNA.567-201ENST00000384736 106 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 MIR34C-201ENST00000384831 77 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 MIR548G-201ENST00000408442 89 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 Y_RNA.609-201ENST00000410669 89 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 RNA5SP501-201ENST00000410990 112 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 AC099513.1-201ENST00000490423 301 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 RNU7-79P-201ENST00000516082 62 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 SNORD67.1-201ENST00000516618 108 ntBASIC1.92□□□□□ -2.1
SSBP3Q9BWW4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 208.1 ms