Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 Y_RNA.440-201ENST00000384120 114 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 MIR588-201ENST00000384900 83 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 SNORD12C-201ENST00000386307 89 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 SNORD77.3-201ENST00000391113 65 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 RNU6-381P-201ENST00000391259 108 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 MIR548I3-201ENST00000408378 149 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 RNU2-55P-201ENST00000411146 174 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 RNU6-602P-201ENST00000411155 105 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 RNU7-45P-201ENST00000459460 63 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 RNU6-998P-201ENST00000515894 101 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 RNU6-126P-201ENST00000516685 103 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 MIR4676-201ENST00000583078 72 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 MIR4282-201ENST00000583613 67 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 AC097639.2-201ENST00000603159 172 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 MIR8087-201ENST00000612745 78 ntBASIC0.42□□□□□ -2.34
NPAS2Q99743 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
NPAS2Q99743 Y_RNA.76-201ENST00000362931 109 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 Y_RNA.85-201ENST00000363014 111 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 RNU6-653P-201ENST00000363074 106 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 SNORA63-201ENST00000363450 132 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 RNY3P5-201ENST00000384127 102 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 SNORA26-201ENST00000391286 122 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 RNU2-38P-201ENST00000410856 79 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 RNU6-177P-201ENST00000411257 104 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 RNY3P16-201ENST00000516338 101 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 RNA5SP153-201ENST00000516498 76 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 MIR3129-201ENST00000581095 76 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 MIR4804-201ENST00000581683 73 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 Y_RNA.812-201ENST00000610788 101 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 Y_RNA.784-201ENST00000613803 101 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 Y_RNA.787-201ENST00000616522 101 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 Y_RNA.780-201ENST00000617336 101 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 Y_RNA.801-201ENST00000619005 101 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 U6.104-201ENST00000637979 90 ntBASIC0.41□□□□□ -2.34
NPAS2Q99743 MIR330-201ENST00000362196 94 ntBASIC0.4□□□□□ -2.35
NPAS2Q99743 Y_RNA.47-201ENST00000362697 108 ntBASIC0.4□□□□□ -2.35
NPAS2Q99743 Y_RNA.176-201ENST00000363815 109 ntBASIC0.4□□□□□ -2.35
NPAS2Q99743 Y_RNA.251-201ENST00000364551 99 ntBASIC0.4□□□□□ -2.35
NPAS2Q99743 RNU4-17P-201ENST00000365598 141 ntBASIC0.4□□□□□ -2.35
NPAS2Q99743 Y_RNA.459-201ENST00000384251 102 ntBASIC0.4□□□□□ -2.35
NPAS2Q99743 Y_RNA.518-201ENST00000384552 113 ntBASIC0.4□□□□□ -2.35
NPAS2Q99743 MIR573-201ENST00000384964 99 ntBASIC0.4□□□□□ -2.35
NPAS2Q99743 RNU6-1165P-201ENST00000410119 107 ntBASIC0.4□□□□□ -2.35
NPAS2Q99743 RNU7-96P-201ENST00000459535 64 ntBASIC0.4□□□□□ -2.35
NPAS2Q99743 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.4□□□□□ -2.35
NPAS2Q99743 AL117187.1-201ENST00000555482 181 ntBASIC0.4□□□□□ -2.35
NPAS2Q99743 AC011921.3-201ENST00000605540 361 ntBASIC0.4□□□□□ -2.35
NPAS2Q99743 AC243829.6-201ENST00000612652 106 ntBASIC0.4□□□□□ -2.35
NPAS2Q99743 AL109933.3-201ENST00000619095 188 ntBASIC0.4□□□□□ -2.35
NPAS2Q99743 Y_RNA.145-201ENST00000363527 102 ntBASIC0.39□□□□□ -2.35
NPAS2Q99743 RNU6-716P-201ENST00000365621 103 ntBASIC0.39□□□□□ -2.35
NPAS2Q99743 Y_RNA.410-201ENST00000383992 113 ntBASIC0.39□□□□□ -2.35
NPAS2Q99743 MIR1197-201ENST00000408818 88 ntBASIC0.39□□□□□ -2.35
NPAS2Q99743 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.39□□□□□ -2.35
NPAS2Q99743 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.39□□□□□ -2.35
NPAS2Q99743 AL442067.1-201ENST00000613261 223 ntBASIC0.39□□□□□ -2.35
NPAS2Q99743 RNU6-694P-201ENST00000364071 147 ntBASIC0.38□□□□□ -2.35
NPAS2Q99743 Y_RNA.262-201ENST00000364641 102 ntBASIC0.38□□□□□ -2.35
NPAS2Q99743 Y_RNA.292-201ENST00000364904 97 ntBASIC0.38□□□□□ -2.35
NPAS2Q99743 Y_RNA.351-201ENST00000365436 96 ntBASIC0.38□□□□□ -2.35
NPAS2Q99743 Y_RNA.352-201ENST00000365439 102 ntBASIC0.38□□□□□ -2.35
NPAS2Q99743 RNU6-597P-201ENST00000365620 102 ntBASIC0.38□□□□□ -2.35
NPAS2Q99743 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
NPAS2Q99743 RNU6-738P-201ENST00000384531 106 ntBASIC0.38□□□□□ -2.35
NPAS2Q99743 MIR140-201ENST00000385282 100 ntBASIC0.38□□□□□ -2.35
NPAS2Q99743 RNU7-56P-201ENST00000458744 62 ntBASIC0.38□□□□□ -2.35
NPAS2Q99743 snoU13.2-201ENST00000459201 104 ntBASIC0.38□□□□□ -2.35
NPAS2Q99743 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.38□□□□□ -2.35
NPAS2Q99743 MIR3612-201ENST00000579753 87 ntBASIC0.38□□□□□ -2.35
NPAS2Q99743 AC008608.1-201ENST00000603910 127 ntBASIC0.38□□□□□ -2.35
NPAS2Q99743 MIR302B-201ENST00000362188 73 ntBASIC0.37□□□□□ -2.35
NPAS2Q99743 Y_RNA.308-201ENST00000365043 101 ntBASIC0.37□□□□□ -2.35
NPAS2Q99743 RNU6-728P-201ENST00000365375 104 ntBASIC0.37□□□□□ -2.35
NPAS2Q99743 RNU4-45P-201ENST00000365469 141 ntBASIC0.37□□□□□ -2.35
NPAS2Q99743 VTRNA1-3-201ENST00000365645 89 ntBASIC0.37□□□□□ -2.35
NPAS2Q99743 SNORA26.6-201ENST00000391256 115 ntBASIC0.37□□□□□ -2.35
NPAS2Q99743 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.37□□□□□ -2.35
NPAS2Q99743 SEPT7P4-201ENST00000437076 306 ntBASIC0.37□□□□□ -2.35
NPAS2Q99743 SNORD127-201ENST00000458892 86 ntBASIC0.37□□□□□ -2.35
NPAS2Q99743 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.37□□□□□ -2.35
NPAS2Q99743 AL360085.1-201ENST00000604713 532 ntBASIC0.37□□□□□ -2.35
NPAS2Q99743 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.37□□□□□ -2.35
NPAS2Q99743 MIR6717-201ENST00000622747 73 ntBASIC0.37□□□□□ -2.35
NPAS2Q99743 AL596211.1-201ENST00000569873 2277 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 MIR30D-201ENST00000362283 70 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 MIR18A-201ENST00000362310 71 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 Y_RNA.149-201ENST00000363558 117 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 SNORD27-201ENST00000363981 72 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 Y_RNA.477-201ENST00000384352 108 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 RNU6-1011P-201ENST00000384668 107 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
NPAS2Q99743 RNU6-493P-201ENST00000391321 108 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 MIR938-201ENST00000401216 83 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 MIR1257-201ENST00000408490 117 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 RNA5SP127-201ENST00000411051 133 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 AL121914.1-201ENST00000450188 156 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 MIR18B-201ENST00000454574 71 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 RNU7-102P-201ENST00000458948 62 ntBASIC0.36□□□□□ -2.35
NPAS2Q99743 RNU7-185P-201ENST00000459215 60 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 300.5 ms