Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 uc_338.6-201ENST00000613544 171 ntBASIC0.75□□□□□ -2.29
CMTM3Q96MX0 AL596211.1-201ENST00000569873 2277 ntBASIC0.75□□□□□ -2.29
CMTM3Q96MX0 AC010332.2-201ENST00000613083 1904 ntBASIC0.74□□□□□ -2.29
CMTM3Q96MX0 Y_RNA.75-201ENST00000362927 97 ntBASIC0.74□□□□□ -2.29
CMTM3Q96MX0 Y_RNA.200-201ENST00000364018 102 ntBASIC0.74□□□□□ -2.29
CMTM3Q96MX0 MIR563-201ENST00000385080 79 ntBASIC0.74□□□□□ -2.29
CMTM3Q96MX0 MIR624-201ENST00000385217 97 ntBASIC0.74□□□□□ -2.29
CMTM3Q96MX0 SNORD12C-201ENST00000386307 89 ntBASIC0.74□□□□□ -2.29
CMTM3Q96MX0 RNU6-918P-201ENST00000391219 106 ntBASIC0.74□□□□□ -2.29
CMTM3Q96MX0 RNU7-45P-201ENST00000459460 63 ntBASIC0.74□□□□□ -2.29
CMTM3Q96MX0 RNU7-70P-201ENST00000516941 66 ntBASIC0.74□□□□□ -2.29
CMTM3Q96MX0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.74□□□□□ -2.29
CMTM3Q96MX0 AC011195.1-201ENST00000578177 177 ntBASIC0.74□□□□□ -2.29
CMTM3Q96MX0 MIR4804-201ENST00000581683 73 ntBASIC0.74□□□□□ -2.29
CMTM3Q96MX0 MIR4676-201ENST00000583078 72 ntBASIC0.74□□□□□ -2.29
CMTM3Q96MX0 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
CMTM3Q96MX0 Y_RNA.83-201ENST00000363005 113 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 Y_RNA.412-201ENST00000384001 104 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 Y_RNA.430-201ENST00000384081 110 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 Y_RNA.435-201ENST00000384095 112 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 MIR520F-201ENST00000384824 87 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 MIR532-201ENST00000385025 91 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 RNU6-321P-201ENST00000410912 106 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 AC015818.7-201ENST00000428754 109 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 AC087499.7-201ENST00000441958 109 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.73□□□□□ -2.29
CMTM3Q96MX0 COX6CP6-201ENST00000490840 228 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 MRPS18CP4-201ENST00000535821 231 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 AC020891.4-201ENST00000605745 93 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 MIR6857-201ENST00000613267 93 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 U6.106-201ENST00000636360 105 ntBASIC0.73□□□□□ -2.29
CMTM3Q96MX0 MIR411-201ENST00000362239 96 ntBASIC0.72□□□□□ -2.29
CMTM3Q96MX0 SNORA25.7-201ENST00000364375 127 ntBASIC0.72□□□□□ -2.29
CMTM3Q96MX0 MIR520H-201ENST00000385126 88 ntBASIC0.72□□□□□ -2.29
CMTM3Q96MX0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.72□□□□□ -2.29
CMTM3Q96MX0 Z83818.1-201ENST00000603584 150 ntBASIC0.72□□□□□ -2.29
CMTM3Q96MX0 FAM71BP1-201ENST00000604431 523 ntBASIC0.72□□□□□ -2.29
CMTM3Q96MX0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
CMTM3Q96MX0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CMTM3Q96MX0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
CMTM3Q96MX0 RNU1-133P-201ENST00000364867 167 ntBASIC0.71□□□□□ -2.3
CMTM3Q96MX0 Y_RNA.489-201ENST00000384410 101 ntBASIC0.71□□□□□ -2.3
CMTM3Q96MX0 AL603825.1-201ENST00000438481 80 ntBASIC0.71□□□□□ -2.3
CMTM3Q96MX0 RNU7-56P-201ENST00000458744 62 ntBASIC0.71□□□□□ -2.3
CMTM3Q96MX0 SCARNA15-202ENST00000516881 127 ntBASIC0.71□□□□□ -2.3
CMTM3Q96MX0 AC009779.6-201ENST00000603972 165 ntBASIC0.71□□□□□ -2.3
CMTM3Q96MX0 RNA5SP432-201ENST00000362480 116 ntBASIC0.7□□□□□ -2.3
CMTM3Q96MX0 RNU6-53P-201ENST00000365367 106 ntBASIC0.7□□□□□ -2.3
CMTM3Q96MX0 RNU6-597P-201ENST00000365620 102 ntBASIC0.7□□□□□ -2.3
CMTM3Q96MX0 SNORA20-201ENST00000384662 132 ntBASIC0.7□□□□□ -2.3
CMTM3Q96MX0 MIR573-201ENST00000384964 99 ntBASIC0.7□□□□□ -2.3
CMTM3Q96MX0 MT-TF-201ENST00000387314 71 ntBASIC0.7□□□□□ -2.3
CMTM3Q96MX0 MIR938-201ENST00000401216 83 ntBASIC0.7□□□□□ -2.3
CMTM3Q96MX0 MIR4431-201ENST00000579990 94 ntBASIC0.7□□□□□ -2.3
CMTM3Q96MX0 MIR30D-201ENST00000362283 70 ntBASIC0.69□□□□□ -2.3
CMTM3Q96MX0 RNU6-1020P-201ENST00000363684 107 ntBASIC0.69□□□□□ -2.3
CMTM3Q96MX0 MIR125B2-201ENST00000385128 89 ntBASIC0.69□□□□□ -2.3
CMTM3Q96MX0 RNU7-185P-201ENST00000459215 60 ntBASIC0.69□□□□□ -2.3
CMTM3Q96MX0 RNU6-113P-201ENST00000516653 101 ntBASIC0.69□□□□□ -2.3
CMTM3Q96MX0 RNU6-1149P-201ENST00000516810 97 ntBASIC0.69□□□□□ -2.3
CMTM3Q96MX0 AC021613.1-201ENST00000623880 111 ntBASIC0.69□□□□□ -2.3
CMTM3Q96MX0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CMTM3Q96MX0 Y_RNA.521-201ENST00000384560 114 ntBASIC0.68□□□□□ -2.3
CMTM3Q96MX0 MIR1257-201ENST00000408490 117 ntBASIC0.68□□□□□ -2.3
CMTM3Q96MX0 RNA5SP222-201ENST00000411039 105 ntBASIC0.68□□□□□ -2.3
CMTM3Q96MX0 RNU6-312P-201ENST00000364629 107 ntBASIC0.67□□□□□ -2.3
CMTM3Q96MX0 RNU6-47P-201ENST00000383866 107 ntBASIC0.67□□□□□ -2.3
CMTM3Q96MX0 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
CMTM3Q96MX0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.67□□□□□ -2.3
CMTM3Q96MX0 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.67□□□□□ -2.3
CMTM3Q96MX0 MIR6841-201ENST00000637129 72 ntBASIC0.67□□□□□ -2.3
CMTM3Q96MX0 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
CMTM3Q96MX0 RNU6-364P-201ENST00000384387 107 ntBASIC0.66□□□□□ -2.3
CMTM3Q96MX0 RNU6-447P-201ENST00000410293 104 ntBASIC0.66□□□□□ -2.3
CMTM3Q96MX0 RNU6-1118P-201ENST00000410382 104 ntBASIC0.66□□□□□ -2.3
CMTM3Q96MX0 RNU6-1076P-201ENST00000410397 104 ntBASIC0.66□□□□□ -2.3
CMTM3Q96MX0 RNU6-355P-201ENST00000410427 104 ntBASIC0.66□□□□□ -2.3
CMTM3Q96MX0 RNU6-791P-201ENST00000410467 104 ntBASIC0.66□□□□□ -2.3
CMTM3Q96MX0 RNU6-705P-201ENST00000410601 104 ntBASIC0.66□□□□□ -2.3
CMTM3Q96MX0 RNU6-1100P-201ENST00000410691 104 ntBASIC0.66□□□□□ -2.3
CMTM3Q96MX0 RNU6-860P-201ENST00000410860 104 ntBASIC0.66□□□□□ -2.3
CMTM3Q96MX0 RNU6-1217P-201ENST00000411276 104 ntBASIC0.66□□□□□ -2.3
CMTM3Q96MX0 RNU6-785P-201ENST00000411324 104 ntBASIC0.66□□□□□ -2.3
CMTM3Q96MX0 AC130289.1-201ENST00000577321 73 ntBASIC0.66□□□□□ -2.3
CMTM3Q96MX0 U6.90-201ENST00000614007 104 ntBASIC0.66□□□□□ -2.3
CMTM3Q96MX0 U6.70-201ENST00000620287 104 ntBASIC0.66□□□□□ -2.3
CMTM3Q96MX0 SNORA22.1-201ENST00000362701 134 ntBASIC0.65□□□□□ -2.31
CMTM3Q96MX0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CMTM3Q96MX0 Y_RNA.393-201ENST00000383936 102 ntBASIC0.65□□□□□ -2.31
CMTM3Q96MX0 Y_RNA.515-201ENST00000384535 112 ntBASIC0.65□□□□□ -2.31
CMTM3Q96MX0 RNA5SP237-201ENST00000410414 113 ntBASIC0.65□□□□□ -2.31
CMTM3Q96MX0 RNU6-893P-201ENST00000458841 100 ntBASIC0.65□□□□□ -2.31
CMTM3Q96MX0 RNU7-156P-201ENST00000517214 74 ntBASIC0.65□□□□□ -2.31
CMTM3Q96MX0 AL662814.1-201ENST00000617364 121 ntBASIC0.65□□□□□ -2.31
CMTM3Q96MX0 MTND5P32-201ENST00000560711 1802 ntBASIC0.65□□□□□ -2.31
CMTM3Q96MX0 Y_RNA.188-201ENST00000363952 111 ntBASIC0.64□□□□□ -2.31
CMTM3Q96MX0 Y_RNA.233-201ENST00000364407 101 ntBASIC0.64□□□□□ -2.31
CMTM3Q96MX0 RNU4-45P-201ENST00000365469 141 ntBASIC0.64□□□□□ -2.31
CMTM3Q96MX0 Y_RNA.401-201ENST00000383965 117 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms