Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 RNU6-971P-201ENST00000516920 106 ntBASIC1.18□□□□□ -2.22
NPIPB3Q92617 MIR4255-201ENST00000579351 72 ntBASIC1.18□□□□□ -2.22
NPIPB3Q92617 MIR3121-201ENST00000579680 77 ntBASIC1.18□□□□□ -2.22
NPIPB3Q92617 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
NPIPB3Q92617 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
NPIPB3Q92617 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
NPIPB3Q92617 SNORD113.3-201ENST00000364630 78 ntBASIC1.17□□□□□ -2.22
NPIPB3Q92617 SNORA2B-201ENST00000384583 137 ntBASIC1.17□□□□□ -2.22
NPIPB3Q92617 RNU6-205P-201ENST00000390858 107 ntBASIC1.17□□□□□ -2.22
NPIPB3Q92617 SNORD111-201ENST00000408139 94 ntBASIC1.17□□□□□ -2.22
NPIPB3Q92617 RNA5SP144-201ENST00000410846 116 ntBASIC1.17□□□□□ -2.22
NPIPB3Q92617 POLR2J4-204ENST00000418424 324 ntBASIC1.17□□□□□ -2.22
NPIPB3Q92617 AC244023.1-201ENST00000426884 112 ntBASIC1.17□□□□□ -2.22
NPIPB3Q92617 AC002429.1-201ENST00000437672 148 ntBASIC1.17□□□□□ -2.22
NPIPB3Q92617 RNU1-41P-201ENST00000516161 162 ntBASIC1.17□□□□□ -2.22
NPIPB3Q92617 RNU1-48P-201ENST00000516400 162 ntBASIC1.17□□□□□ -2.22
NPIPB3Q92617 RNU6-406P-201ENST00000516470 107 ntBASIC1.17□□□□□ -2.22
NPIPB3Q92617 AC242498.1-201ENST00000604134 111 ntBASIC1.17□□□□□ -2.22
NPIPB3Q92617 AC021443.1-201ENST00000604478 211 ntBASIC1.17□□□□□ -2.22
NPIPB3Q92617 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
NPIPB3Q92617 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
NPIPB3Q92617 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
NPIPB3Q92617 Y_RNA.114-201ENST00000363265 113 ntBASIC1.16□□□□□ -2.22
NPIPB3Q92617 RNU6-647P-201ENST00000364243 107 ntBASIC1.16□□□□□ -2.22
NPIPB3Q92617 Y_RNA.294-201ENST00000364916 102 ntBASIC1.16□□□□□ -2.22
NPIPB3Q92617 RNU6-81P-201ENST00000365608 104 ntBASIC1.16□□□□□ -2.22
NPIPB3Q92617 MIR19B1-201ENST00000384829 87 ntBASIC1.16□□□□□ -2.22
NPIPB3Q92617 MIR517C-201ENST00000385103 95 ntBASIC1.16□□□□□ -2.22
NPIPB3Q92617 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
NPIPB3Q92617 RNA5SP95-201ENST00000410319 137 ntBASIC1.16□□□□□ -2.22
NPIPB3Q92617 RNU6-1211P-201ENST00000459179 105 ntBASIC1.16□□□□□ -2.22
NPIPB3Q92617 AC036111.3-201ENST00000526389 112 ntBASIC1.16□□□□□ -2.22
NPIPB3Q92617 AC023827.1-201ENST00000569247 97 ntBASIC1.16□□□□□ -2.22
NPIPB3Q92617 SNORD53B-201ENST00000577887 78 ntBASIC1.16□□□□□ -2.22
NPIPB3Q92617 MIR4305-201ENST00000583252 102 ntBASIC1.16□□□□□ -2.22
NPIPB3Q92617 AC106800.4-201ENST00000614905 153 ntBASIC1.16□□□□□ -2.22
NPIPB3Q92617 Y_RNA.280-201ENST00000364765 112 ntBASIC1.15□□□□□ -2.23
NPIPB3Q92617 RNU6-580P-201ENST00000365159 107 ntBASIC1.15□□□□□ -2.23
NPIPB3Q92617 MIR1323-201ENST00000408090 73 ntBASIC1.15□□□□□ -2.23
NPIPB3Q92617 RNU7-62P-201ENST00000458856 62 ntBASIC1.15□□□□□ -2.23
NPIPB3Q92617 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.15□□□□□ -2.23
NPIPB3Q92617 RNU1-124P-201ENST00000363861 145 ntBASIC1.14□□□□□ -2.23
NPIPB3Q92617 Y_RNA.366-201ENST00000365540 102 ntBASIC1.14□□□□□ -2.23
NPIPB3Q92617 MIR588-201ENST00000384900 83 ntBASIC1.14□□□□□ -2.23
NPIPB3Q92617 SNORD12C-201ENST00000386307 89 ntBASIC1.14□□□□□ -2.23
NPIPB3Q92617 SNORA67.6-201ENST00000391093 99 ntBASIC1.14□□□□□ -2.23
NPIPB3Q92617 AL354695.1-201ENST00000427935 228 ntBASIC1.14□□□□□ -2.23
NPIPB3Q92617 snoU13.2-201ENST00000459201 104 ntBASIC1.14□□□□□ -2.23
NPIPB3Q92617 RNU7-164P-201ENST00000459221 62 ntBASIC1.14□□□□□ -2.23
NPIPB3Q92617 RNU7-113P-201ENST00000459273 62 ntBASIC1.14□□□□□ -2.23
NPIPB3Q92617 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
NPIPB3Q92617 AL137067.1-201ENST00000615933 120 ntBASIC1.14□□□□□ -2.23
NPIPB3Q92617 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
NPIPB3Q92617 RNU6-959P-201ENST00000384671 107 ntBASIC1.13□□□□□ -2.23
NPIPB3Q92617 SNORA26.9-201ENST00000391322 122 ntBASIC1.13□□□□□ -2.23
NPIPB3Q92617 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.13□□□□□ -2.23
NPIPB3Q92617 AL158147.1-201ENST00000443970 75 ntBASIC1.13□□□□□ -2.23
NPIPB3Q92617 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.13□□□□□ -2.23
NPIPB3Q92617 MIR4781-201ENST00000585250 76 ntBASIC1.13□□□□□ -2.23
NPIPB3Q92617 AC108081.1-201ENST00000604358 221 ntBASIC1.13□□□□□ -2.23
NPIPB3Q92617 AC012676.2-201ENST00000619258 186 ntBASIC1.13□□□□□ -2.23
NPIPB3Q92617 RNU6-235P-201ENST00000362644 107 ntBASIC1.12□□□□□ -2.23
NPIPB3Q92617 Y_RNA.171-201ENST00000363760 102 ntBASIC1.12□□□□□ -2.23
NPIPB3Q92617 Y_RNA.218-201ENST00000364218 104 ntBASIC1.12□□□□□ -2.23
NPIPB3Q92617 SNORD113-1-201ENST00000365321 69 ntBASIC1.12□□□□□ -2.23
NPIPB3Q92617 MIR200A-201ENST00000384875 90 ntBASIC1.12□□□□□ -2.23
NPIPB3Q92617 RNA5SP237-201ENST00000410414 113 ntBASIC1.12□□□□□ -2.23
NPIPB3Q92617 RNU6-994P-201ENST00000410507 111 ntBASIC1.12□□□□□ -2.23
NPIPB3Q92617 AC113410.1-201ENST00000505029 247 ntBASIC1.12□□□□□ -2.23
NPIPB3Q92617 RNA5SP61-201ENST00000516453 100 ntBASIC1.12□□□□□ -2.23
NPIPB3Q92617 SNORA31.24-201ENST00000517232 57 ntBASIC1.12□□□□□ -2.23
NPIPB3Q92617 MIR6740-201ENST00000618268 113 ntBASIC1.12□□□□□ -2.23
NPIPB3Q92617 Y_RNA.71-201ENST00000362892 104 ntBASIC1.11□□□□□ -2.23
NPIPB3Q92617 Y_RNA.298-201ENST00000364960 107 ntBASIC1.11□□□□□ -2.23
NPIPB3Q92617 RNA5SP190-201ENST00000365222 118 ntBASIC1.11□□□□□ -2.23
NPIPB3Q92617 RNU6-80P-201ENST00000384195 107 ntBASIC1.11□□□□□ -2.23
NPIPB3Q92617 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.11□□□□□ -2.23
NPIPB3Q92617 RNU6-1165P-201ENST00000410119 107 ntBASIC1.11□□□□□ -2.23
NPIPB3Q92617 AC067940.1-201ENST00000458411 300 ntBASIC1.11□□□□□ -2.23
NPIPB3Q92617 RPS23P4-201ENST00000487908 423 ntBASIC1.11□□□□□ -2.23
NPIPB3Q92617 RNU7-123P-201ENST00000515911 60 ntBASIC1.11□□□□□ -2.23
NPIPB3Q92617 RNU2-35P-201ENST00000516446 142 ntBASIC1.11□□□□□ -2.23
NPIPB3Q92617 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.11□□□□□ -2.23
NPIPB3Q92617 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.11□□□□□ -2.23
NPIPB3Q92617 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
NPIPB3Q92617 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.1□□□□□ -2.23
NPIPB3Q92617 AL157777.2-201ENST00000258070 137 ntBASIC1.1□□□□□ -2.23
NPIPB3Q92617 SNORD115-2-201ENST00000362842 82 ntBASIC1.1□□□□□ -2.23
NPIPB3Q92617 RNU6-60P-201ENST00000364792 103 ntBASIC1.1□□□□□ -2.23
NPIPB3Q92617 SNORD115-20-201ENST00000365099 82 ntBASIC1.1□□□□□ -2.23
NPIPB3Q92617 SNORD116-14-201ENST00000383894 92 ntBASIC1.1□□□□□ -2.23
NPIPB3Q92617 SNORD116-17-201ENST00000383929 92 ntBASIC1.1□□□□□ -2.23
NPIPB3Q92617 SNORD116-15-201ENST00000384445 92 ntBASIC1.1□□□□□ -2.23
NPIPB3Q92617 RNU6-1117P-201ENST00000384525 104 ntBASIC1.1□□□□□ -2.23
NPIPB3Q92617 Y_RNA.531-201ENST00000384589 121 ntBASIC1.1□□□□□ -2.23
NPIPB3Q92617 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
NPIPB3Q92617 SNORD116-19-201ENST00000384729 92 ntBASIC1.1□□□□□ -2.23
NPIPB3Q92617 SNORA19-201ENST00000384737 128 ntBASIC1.1□□□□□ -2.23
NPIPB3Q92617 MIR563-201ENST00000385080 79 ntBASIC1.1□□□□□ -2.23
NPIPB3Q92617 RNU6-772P-201ENST00000516042 105 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms