Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU6-922P-201ENST00000516753 99 ntBASIC1.83□□□□□ -2.12
RTF1Q92541 RNU6-958P-201ENST00000516995 106 ntBASIC1.83□□□□□ -2.12
RTF1Q92541 AL137067.1-201ENST00000615933 120 ntBASIC1.83□□□□□ -2.12
RTF1Q92541 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.83□□□□□ -2.12
RTF1Q92541 MIR337-201ENST00000362281 93 ntBASIC1.82□□□□□ -2.12
RTF1Q92541 Y_RNA.118-201ENST00000363300 101 ntBASIC1.82□□□□□ -2.12
RTF1Q92541 Y_RNA.226-201ENST00000364337 114 ntBASIC1.82□□□□□ -2.12
RTF1Q92541 snoU13.16-201ENST00000459350 104 ntBASIC1.82□□□□□ -2.12
RTF1Q92541 SNORD111.1-201ENST00000516421 86 ntBASIC1.82□□□□□ -2.12
RTF1Q92541 AC133485.4-201ENST00000561835 220 ntBASIC1.82□□□□□ -2.12
RTF1Q92541 AC138907.4-201ENST00000570107 226 ntBASIC1.82□□□□□ -2.12
RTF1Q92541 AL157834.3-201ENST00000615543 103 ntBASIC1.82□□□□□ -2.12
RTF1Q92541 SNORD58C-201ENST00000365223 64 ntBASIC1.81□□□□□ -2.12
RTF1Q92541 Y_RNA.366-201ENST00000365540 102 ntBASIC1.81□□□□□ -2.12
RTF1Q92541 RNU6-997P-201ENST00000384725 107 ntBASIC1.81□□□□□ -2.12
RTF1Q92541 MIR570-201ENST00000384917 97 ntBASIC1.81□□□□□ -2.12
RTF1Q92541 MIRLET7F2-201ENST00000385277 83 ntBASIC1.81□□□□□ -2.12
RTF1Q92541 RNA5SP261-201ENST00000410536 106 ntBASIC1.81□□□□□ -2.12
RTF1Q92541 AC027119.1-201ENST00000440877 241 ntBASIC1.81□□□□□ -2.12
RTF1Q92541 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.81□□□□□ -2.12
RTF1Q92541 SNORA31.4-201ENST00000516049 129 ntBASIC1.81□□□□□ -2.12
RTF1Q92541 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.81□□□□□ -2.12
RTF1Q92541 MIR4781-201ENST00000585250 76 ntBASIC1.81□□□□□ -2.12
RTF1Q92541 MIR3914-2-201ENST00000637339 95 ntBASIC1.81□□□□□ -2.12
RTF1Q92541 Y_RNA.327-201ENST00000365201 102 ntBASIC1.8□□□□□ -2.12
RTF1Q92541 Y_RNA.466-201ENST00000384294 113 ntBASIC1.8□□□□□ -2.12
RTF1Q92541 RNU6-1065P-201ENST00000384513 106 ntBASIC1.8□□□□□ -2.12
RTF1Q92541 RNU6-1319P-201ENST00000390855 104 ntBASIC1.8□□□□□ -2.12
RTF1Q92541 RNU6-747P-201ENST00000390928 104 ntBASIC1.8□□□□□ -2.12
RTF1Q92541 RNU6-241P-201ENST00000391148 104 ntBASIC1.8□□□□□ -2.12
RTF1Q92541 RNU6-177P-201ENST00000411257 104 ntBASIC1.8□□□□□ -2.12
RTF1Q92541 RNU1-98P-201ENST00000458992 160 ntBASIC1.8□□□□□ -2.12
RTF1Q92541 RNU6-1061P-201ENST00000516530 99 ntBASIC1.8□□□□□ -2.12
RTF1Q92541 IGKV1-22-201ENST00000524313 326 ntBASIC1.8□□□□□ -2.12
RTF1Q92541 AC021613.1-201ENST00000623880 111 ntBASIC1.8□□□□□ -2.12
RTF1Q92541 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RTF1Q92541 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RTF1Q92541 RNA5SP48-201ENST00000363969 126 ntBASIC1.79□□□□□ -2.12
RTF1Q92541 RNA5SP136-201ENST00000410906 107 ntBASIC1.79□□□□□ -2.12
RTF1Q92541 MIR3152-201ENST00000579801 74 ntBASIC1.79□□□□□ -2.12
RTF1Q92541 AL359881.1-201ENST00000602916 267 ntBASIC1.79□□□□□ -2.12
RTF1Q92541 AL020996.3-201ENST00000606617 222 ntBASIC1.79□□□□□ -2.12
RTF1Q92541 AL353770.2-201ENST00000620024 78 ntBASIC1.79□□□□□ -2.12
RTF1Q92541 MIR4251-201ENST00000635819 61 ntBASIC1.79□□□□□ -2.12
RTF1Q92541 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
RTF1Q92541 RNY1P10-201ENST00000363268 113 ntBASIC1.78□□□□□ -2.12
RTF1Q92541 RNU6-913P-201ENST00000390913 95 ntBASIC1.78□□□□□ -2.12
RTF1Q92541 RNU1-78P-201ENST00000391248 165 ntBASIC1.78□□□□□ -2.12
RTF1Q92541 MIR934-201ENST00000401241 83 ntBASIC1.78□□□□□ -2.12
RTF1Q92541 RNU6-893P-201ENST00000458841 100 ntBASIC1.78□□□□□ -2.12
RTF1Q92541 RPL30P7-201ENST00000479312 323 ntBASIC1.78□□□□□ -2.12
RTF1Q92541 RNU7-41P-201ENST00000515917 61 ntBASIC1.78□□□□□ -2.12
RTF1Q92541 RNU6-781P-201ENST00000516377 101 ntBASIC1.78□□□□□ -2.12
RTF1Q92541 MIR4422-201ENST00000581938 83 ntBASIC1.78□□□□□ -2.12
RTF1Q92541 AC021443.1-201ENST00000604478 211 ntBASIC1.78□□□□□ -2.12
RTF1Q92541 U6.95-201ENST00000636931 70 ntBASIC1.78□□□□□ -2.12
RTF1Q92541 RNU6-834P-201ENST00000362367 110 ntBASIC1.77□□□□□ -2.13
RTF1Q92541 Y_RNA.346-201ENST00000365385 112 ntBASIC1.77□□□□□ -2.13
RTF1Q92541 Y_RNA.525-201ENST00000384570 113 ntBASIC1.77□□□□□ -2.13
RTF1Q92541 SNORA26.6-201ENST00000391256 115 ntBASIC1.77□□□□□ -2.13
RTF1Q92541 AC245517.4-201ENST00000448601 281 ntBASIC1.77□□□□□ -2.13
RTF1Q92541 MIR3937-201ENST00000580135 106 ntBASIC1.77□□□□□ -2.13
RTF1Q92541 MIR4305-201ENST00000583252 102 ntBASIC1.77□□□□□ -2.13
RTF1Q92541 MIR8055-201ENST00000610739 97 ntBASIC1.77□□□□□ -2.13
RTF1Q92541 Y_RNA.430-201ENST00000384081 110 ntBASIC1.76□□□□□ -2.13
RTF1Q92541 Y_RNA.508-201ENST00000384502 114 ntBASIC1.76□□□□□ -2.13
RTF1Q92541 Y_RNA.629-201ENST00000411368 105 ntBASIC1.76□□□□□ -2.13
RTF1Q92541 RPL39P39-201ENST00000455840 151 ntBASIC1.76□□□□□ -2.13
RTF1Q92541 RNU1-123P-201ENST00000458950 160 ntBASIC1.76□□□□□ -2.13
RTF1Q92541 AC019176.1-201ENST00000518519 225 ntBASIC1.76□□□□□ -2.13
RTF1Q92541 HSPE1P19-201ENST00000603327 295 ntBASIC1.76□□□□□ -2.13
RTF1Q92541 AL096861.1-201ENST00000610899 123 ntBASIC1.76□□□□□ -2.13
RTF1Q92541 AC025166.1-201ENST00000612411 163 ntBASIC1.76□□□□□ -2.13
RTF1Q92541 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
RTF1Q92541 MIR6717-201ENST00000622747 73 ntBASIC1.76□□□□□ -2.13
RTF1Q92541 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.76□□□□□ -2.13
RTF1Q92541 Y_RNA.273-201ENST00000364703 102 ntBASIC1.75□□□□□ -2.13
RTF1Q92541 RNU4-16P-201ENST00000364737 141 ntBASIC1.75□□□□□ -2.13
RTF1Q92541 Y_RNA.298-201ENST00000364960 107 ntBASIC1.75□□□□□ -2.13
RTF1Q92541 RNA5SP144-201ENST00000410846 116 ntBASIC1.75□□□□□ -2.13
RTF1Q92541 Y_RNA.630-201ENST00000411370 108 ntBASIC1.75□□□□□ -2.13
RTF1Q92541 RNU7-164P-201ENST00000459221 62 ntBASIC1.75□□□□□ -2.13
RTF1Q92541 COX6CP6-201ENST00000490840 228 ntBASIC1.75□□□□□ -2.13
RTF1Q92541 MIR3192-201ENST00000584920 77 ntBASIC1.75□□□□□ -2.13
RTF1Q92541 MIR1263-201ENST00000408324 86 ntBASIC1.74□□□□□ -2.13
RTF1Q92541 RNU7-45P-201ENST00000459460 63 ntBASIC1.74□□□□□ -2.13
RTF1Q92541 RNA5SP445-201ENST00000515889 115 ntBASIC1.74□□□□□ -2.13
RTF1Q92541 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.74□□□□□ -2.13
RTF1Q92541 MIR3664-201ENST00000579074 99 ntBASIC1.74□□□□□ -2.13
RTF1Q92541 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.74□□□□□ -2.13
RTF1Q92541 MIR6841-201ENST00000637129 72 ntBASIC1.74□□□□□ -2.13
RTF1Q92541 Z97988.1-201ENST00000637697 135 ntBASIC1.74□□□□□ -2.13
RTF1Q92541 SNORA1.1-201ENST00000364671 133 ntBASIC1.73□□□□□ -2.13
RTF1Q92541 Y_RNA.353-201ENST00000365440 108 ntBASIC1.73□□□□□ -2.13
RTF1Q92541 Y_RNA.528-201ENST00000384575 108 ntBASIC1.73□□□□□ -2.13
RTF1Q92541 AL022718.1-201ENST00000412004 84 ntBASIC1.73□□□□□ -2.13
RTF1Q92541 POLR2J4-204ENST00000418424 324 ntBASIC1.73□□□□□ -2.13
RTF1Q92541 RNY4P20-201ENST00000516678 93 ntBASIC1.73□□□□□ -2.13
RTF1Q92541 MIR548AO-201ENST00000579992 96 ntBASIC1.73□□□□□ -2.13
RTF1Q92541 RNU6-1290P-201ENST00000362957 109 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms