Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
HMGB4Q8WW32 Y_RNA.580-201ENST00000391004 95 ntBASIC1.21□□□□□ -2.22
HMGB4Q8WW32 HMGN1P33-201ENST00000432945 451 ntBASIC1.21□□□□□ -2.22
HMGB4Q8WW32 RNA5SP404-201ENST00000517118 132 ntBASIC1.21□□□□□ -2.22
HMGB4Q8WW32 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.21□□□□□ -2.22
HMGB4Q8WW32 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGB4Q8WW32 RNU1-124P-201ENST00000363861 145 ntBASIC1.2□□□□□ -2.22
HMGB4Q8WW32 Y_RNA.466-201ENST00000384294 113 ntBASIC1.2□□□□□ -2.22
HMGB4Q8WW32 Y_RNA.497-201ENST00000384447 98 ntBASIC1.2□□□□□ -2.22
HMGB4Q8WW32 RNU6-125P-201ENST00000384505 107 ntBASIC1.2□□□□□ -2.22
HMGB4Q8WW32 MIR520E-201ENST00000384867 87 ntBASIC1.2□□□□□ -2.22
HMGB4Q8WW32 SNORA26.6-201ENST00000391256 115 ntBASIC1.2□□□□□ -2.22
HMGB4Q8WW32 RNU6-1190P-201ENST00000410811 104 ntBASIC1.2□□□□□ -2.22
HMGB4Q8WW32 RPS29P1-201ENST00000465274 159 ntBASIC1.2□□□□□ -2.22
HMGB4Q8WW32 AL596211.1-201ENST00000569873 2277 ntBASIC1.2□□□□□ -2.22
HMGB4Q8WW32 Y_RNA.180-201ENST00000363867 113 ntBASIC1.19□□□□□ -2.22
HMGB4Q8WW32 RNU1-133P-201ENST00000364867 167 ntBASIC1.19□□□□□ -2.22
HMGB4Q8WW32 RNU6-1130P-201ENST00000365434 107 ntBASIC1.19□□□□□ -2.22
HMGB4Q8WW32 MIR150-201ENST00000385048 84 ntBASIC1.19□□□□□ -2.22
HMGB4Q8WW32 MT-TN-201ENST00000387400 73 ntBASIC1.19□□□□□ -2.22
HMGB4Q8WW32 SNORD37.2-201ENST00000391075 66 ntBASIC1.19□□□□□ -2.22
HMGB4Q8WW32 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.19□□□□□ -2.22
HMGB4Q8WW32 RPS23P4-201ENST00000487908 423 ntBASIC1.19□□□□□ -2.22
HMGB4Q8WW32 RNA5SP236-201ENST00000516169 116 ntBASIC1.19□□□□□ -2.22
HMGB4Q8WW32 RNU7-70P-201ENST00000516941 66 ntBASIC1.19□□□□□ -2.22
HMGB4Q8WW32 MIR3144-201ENST00000579460 79 ntBASIC1.19□□□□□ -2.22
HMGB4Q8WW32 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
HMGB4Q8WW32 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.19□□□□□ -2.22
HMGB4Q8WW32 SNORA1.1-201ENST00000364671 133 ntBASIC1.18□□□□□ -2.22
HMGB4Q8WW32 RNU6-449P-201ENST00000383914 107 ntBASIC1.18□□□□□ -2.22
HMGB4Q8WW32 RNU6-804P-201ENST00000384286 107 ntBASIC1.18□□□□□ -2.22
HMGB4Q8WW32 MRPL35P3-201ENST00000421557 364 ntBASIC1.18□□□□□ -2.22
HMGB4Q8WW32 RNU7-45P-201ENST00000459460 63 ntBASIC1.18□□□□□ -2.22
HMGB4Q8WW32 AC087343.1-201ENST00000477341 475 ntBASIC1.18□□□□□ -2.22
HMGB4Q8WW32 RNU7-40P-201ENST00000516397 64 ntBASIC1.18□□□□□ -2.22
HMGB4Q8WW32 AC036111.3-201ENST00000526389 112 ntBASIC1.18□□□□□ -2.22
HMGB4Q8WW32 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
HMGB4Q8WW32 MIR6717-201ENST00000622747 73 ntBASIC1.18□□□□□ -2.22
HMGB4Q8WW32 MIR377-201ENST00000362145 69 ntBASIC1.17□□□□□ -2.22
HMGB4Q8WW32 RNY1P11-201ENST00000363759 113 ntBASIC1.17□□□□□ -2.22
HMGB4Q8WW32 SNORD116-18-201ENST00000383961 92 ntBASIC1.17□□□□□ -2.22
HMGB4Q8WW32 RNU6-939P-201ENST00000384634 107 ntBASIC1.17□□□□□ -2.22
HMGB4Q8WW32 RNA5SP95-201ENST00000410319 137 ntBASIC1.17□□□□□ -2.22
HMGB4Q8WW32 AC244023.1-201ENST00000426884 112 ntBASIC1.17□□□□□ -2.22
HMGB4Q8WW32 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGB4Q8WW32 MIR4264-201ENST00000583520 66 ntBASIC1.17□□□□□ -2.22
HMGB4Q8WW32 AC242498.1-201ENST00000604134 111 ntBASIC1.17□□□□□ -2.22
HMGB4Q8WW32 Y_RNA.778-201ENST00000620203 90 ntBASIC1.17□□□□□ -2.22
HMGB4Q8WW32 Y_RNA.168-201ENST00000363740 102 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 RNU6-151P-201ENST00000364158 107 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 Y_RNA.251-201ENST00000364551 99 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 SNORD38B-201ENST00000384690 67 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 RNU6-1319P-201ENST00000390855 104 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 RNU6-747P-201ENST00000390928 104 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 RNU6-241P-201ENST00000391148 104 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 RNA5SP261-201ENST00000410536 106 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 RNU6-602P-201ENST00000411155 105 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 RNU6-177P-201ENST00000411257 104 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 AC112693.2-201ENST00000556538 232 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 AC023827.1-201ENST00000569247 97 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.16□□□□□ -2.22
HMGB4Q8WW32 AP000753.3-201ENST00000604083 169 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 AC106800.4-201ENST00000614905 153 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 SNORD38B-202ENST00000625943 69 ntBASIC1.16□□□□□ -2.22
HMGB4Q8WW32 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
HMGB4Q8WW32 SNORD113.3-201ENST00000364630 78 ntBASIC1.15□□□□□ -2.23
HMGB4Q8WW32 RNU6-580P-201ENST00000365159 107 ntBASIC1.15□□□□□ -2.23
HMGB4Q8WW32 RNU4-11P-201ENST00000365287 132 ntBASIC1.15□□□□□ -2.23
HMGB4Q8WW32 Y_RNA.398-201ENST00000383952 99 ntBASIC1.15□□□□□ -2.23
HMGB4Q8WW32 Y_RNA.464-201ENST00000384282 110 ntBASIC1.15□□□□□ -2.23
HMGB4Q8WW32 SNORD111-201ENST00000408139 94 ntBASIC1.15□□□□□ -2.23
HMGB4Q8WW32 RPS3AP1-201ENST00000413190 320 ntBASIC1.15□□□□□ -2.23
HMGB4Q8WW32 RNU2-60P-201ENST00000517290 128 ntBASIC1.15□□□□□ -2.23
HMGB4Q8WW32 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.15□□□□□ -2.23
HMGB4Q8WW32 MIR6767-201ENST00000637302 66 ntBASIC1.15□□□□□ -2.23
HMGB4Q8WW32 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
HMGB4Q8WW32 Y_RNA.8-201ENST00000362353 102 ntBASIC1.14□□□□□ -2.23
HMGB4Q8WW32 Y_RNA.430-201ENST00000384081 110 ntBASIC1.14□□□□□ -2.23
HMGB4Q8WW32 Y_RNA.584-201ENST00000391090 114 ntBASIC1.14□□□□□ -2.23
HMGB4Q8WW32 RNU6-1212P-201ENST00000517023 104 ntBASIC1.14□□□□□ -2.23
HMGB4Q8WW32 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGB4Q8WW32 AC021613.1-201ENST00000623880 111 ntBASIC1.14□□□□□ -2.23
HMGB4Q8WW32 RNY1P6-201ENST00000384193 109 ntBASIC1.13□□□□□ -2.23
HMGB4Q8WW32 SNORA2B-201ENST00000384583 137 ntBASIC1.13□□□□□ -2.23
HMGB4Q8WW32 RNU6-205P-201ENST00000390858 107 ntBASIC1.13□□□□□ -2.23
HMGB4Q8WW32 MIR548I1-201ENST00000408810 149 ntBASIC1.13□□□□□ -2.23
HMGB4Q8WW32 MTATP6P21-201ENST00000440681 189 ntBASIC1.13□□□□□ -2.23
HMGB4Q8WW32 RNU7-197P-201ENST00000458836 62 ntBASIC1.13□□□□□ -2.23
HMGB4Q8WW32 SNORD124-201ENST00000459577 104 ntBASIC1.13□□□□□ -2.23
HMGB4Q8WW32 MIR3152-201ENST00000579801 74 ntBASIC1.13□□□□□ -2.23
HMGB4Q8WW32 HSPE1P19-201ENST00000603327 295 ntBASIC1.13□□□□□ -2.23
HMGB4Q8WW32 AC022709.1-201ENST00000615967 87 ntBASIC1.13□□□□□ -2.23
HMGB4Q8WW32 AC021753.1-201ENST00000635724 168 ntBASIC1.13□□□□□ -2.23
HMGB4Q8WW32 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HMGB4Q8WW32 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
HMGB4Q8WW32 RNU6-349P-201ENST00000362402 107 ntBASIC1.12□□□□□ -2.23
HMGB4Q8WW32 MIR200A-201ENST00000384875 90 ntBASIC1.12□□□□□ -2.23
HMGB4Q8WW32 MTND5P41-201ENST00000517498 206 ntBASIC1.12□□□□□ -2.23
HMGB4Q8WW32 MIR151B-201ENST00000584249 96 ntBASIC1.12□□□□□ -2.23
HMGB4Q8WW32 MIR6788-201ENST00000618842 66 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 268.6 ms