Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 HMGN1P33-201ENST00000432945 451 ntBASIC1.05□□□□□ -2.24
PCDH20Q8N6Y1 AC002429.1-201ENST00000437672 148 ntBASIC1.05□□□□□ -2.24
PCDH20Q8N6Y1 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
PCDH20Q8N6Y1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
PCDH20Q8N6Y1 SNORA1.1-201ENST00000364671 133 ntBASIC1.04□□□□□ -2.24
PCDH20Q8N6Y1 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
PCDH20Q8N6Y1 SNORD116-18-201ENST00000383961 92 ntBASIC1.04□□□□□ -2.24
PCDH20Q8N6Y1 Y_RNA.497-201ENST00000384447 98 ntBASIC1.04□□□□□ -2.24
PCDH20Q8N6Y1 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
PCDH20Q8N6Y1 MIR499A-201ENST00000384903 122 ntBASIC1.04□□□□□ -2.24
PCDH20Q8N6Y1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.04□□□□□ -2.24
PCDH20Q8N6Y1 RPS29P28-201ENST00000446439 141 ntBASIC1.04□□□□□ -2.24
PCDH20Q8N6Y1 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
PCDH20Q8N6Y1 MIR6504-201ENST00000613520 61 ntBASIC1.04□□□□□ -2.24
PCDH20Q8N6Y1 MIR377-201ENST00000362145 69 ntBASIC1.03□□□□□ -2.24
PCDH20Q8N6Y1 RNU1-124P-201ENST00000363861 145 ntBASIC1.03□□□□□ -2.24
PCDH20Q8N6Y1 Y_RNA.180-201ENST00000363867 113 ntBASIC1.03□□□□□ -2.24
PCDH20Q8N6Y1 RNU4-11P-201ENST00000365287 132 ntBASIC1.03□□□□□ -2.24
PCDH20Q8N6Y1 RNU6-1130P-201ENST00000365434 107 ntBASIC1.03□□□□□ -2.24
PCDH20Q8N6Y1 RNU6-804P-201ENST00000384286 107 ntBASIC1.03□□□□□ -2.24
PCDH20Q8N6Y1 SNORA26.6-201ENST00000391256 115 ntBASIC1.03□□□□□ -2.24
PCDH20Q8N6Y1 RNA5SP261-201ENST00000410536 106 ntBASIC1.03□□□□□ -2.24
PCDH20Q8N6Y1 RNA5SP236-201ENST00000516169 116 ntBASIC1.03□□□□□ -2.24
PCDH20Q8N6Y1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.03□□□□□ -2.24
PCDH20Q8N6Y1 MIR3144-201ENST00000579460 79 ntBASIC1.03□□□□□ -2.24
PCDH20Q8N6Y1 AP000753.3-201ENST00000604083 169 ntBASIC1.03□□□□□ -2.24
PCDH20Q8N6Y1 Y_RNA.778-201ENST00000620203 90 ntBASIC1.03□□□□□ -2.24
PCDH20Q8N6Y1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.03□□□□□ -2.24
PCDH20Q8N6Y1 RNU6-151P-201ENST00000364158 107 ntBASIC1.02□□□□□ -2.25
PCDH20Q8N6Y1 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
PCDH20Q8N6Y1 SNORD38B-201ENST00000384690 67 ntBASIC1.02□□□□□ -2.25
PCDH20Q8N6Y1 RNA5SP95-201ENST00000410319 137 ntBASIC1.02□□□□□ -2.25
PCDH20Q8N6Y1 RNU7-45P-201ENST00000459460 63 ntBASIC1.02□□□□□ -2.25
PCDH20Q8N6Y1 RPS23P4-201ENST00000487908 423 ntBASIC1.02□□□□□ -2.25
PCDH20Q8N6Y1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.02□□□□□ -2.25
PCDH20Q8N6Y1 AC112693.2-201ENST00000556538 232 ntBASIC1.02□□□□□ -2.25
PCDH20Q8N6Y1 AC023827.1-201ENST00000569247 97 ntBASIC1.02□□□□□ -2.25
PCDH20Q8N6Y1 MIR4264-201ENST00000583520 66 ntBASIC1.02□□□□□ -2.25
PCDH20Q8N6Y1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.02□□□□□ -2.25
PCDH20Q8N6Y1 MIR6717-201ENST00000622747 73 ntBASIC1.02□□□□□ -2.25
PCDH20Q8N6Y1 SNORD38B-202ENST00000625943 69 ntBASIC1.02□□□□□ -2.25
PCDH20Q8N6Y1 MIR96-201ENST00000362288 78 ntBASIC1.01□□□□□ -2.25
PCDH20Q8N6Y1 Y_RNA.8-201ENST00000362353 102 ntBASIC1.01□□□□□ -2.25
PCDH20Q8N6Y1 Y_RNA.168-201ENST00000363740 102 ntBASIC1.01□□□□□ -2.25
PCDH20Q8N6Y1 Y_RNA.226-201ENST00000364337 114 ntBASIC1.01□□□□□ -2.25
PCDH20Q8N6Y1 Y_RNA.584-201ENST00000391090 114 ntBASIC1.01□□□□□ -2.25
PCDH20Q8N6Y1 RNU6-602P-201ENST00000411155 105 ntBASIC1.01□□□□□ -2.25
PCDH20Q8N6Y1 AC036111.3-201ENST00000526389 112 ntBASIC1.01□□□□□ -2.25
PCDH20Q8N6Y1 HSPE1P19-201ENST00000603327 295 ntBASIC1.01□□□□□ -2.25
PCDH20Q8N6Y1 AC106800.4-201ENST00000614905 153 ntBASIC1.01□□□□□ -2.25
PCDH20Q8N6Y1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.01□□□□□ -2.25
PCDH20Q8N6Y1 RNY1P11-201ENST00000363759 113 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 SNORD114-27-201ENST00000363766 70 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 Y_RNA.251-201ENST00000364551 99 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 SNORD113.3-201ENST00000364630 78 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 Y_RNA.398-201ENST00000383952 99 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 Y_RNA.464-201ENST00000384282 110 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 SNORA2B-201ENST00000384583 137 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 RNU6-1319P-201ENST00000390855 104 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 RNU6-747P-201ENST00000390928 104 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 RNU6-241P-201ENST00000391148 104 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 RNU6-177P-201ENST00000411257 104 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 RPS3AP1-201ENST00000413190 320 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 AC244023.1-201ENST00000426884 112 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 MTATP6P21-201ENST00000440681 189 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 MIR3152-201ENST00000579801 74 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 AC242498.1-201ENST00000604134 111 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 AC021613.1-201ENST00000623880 111 ntBASIC1□□□□□ -2.25
PCDH20Q8N6Y1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
PCDH20Q8N6Y1 RNU1-93P-201ENST00000364704 169 ntBASIC0.99□□□□□ -2.25
PCDH20Q8N6Y1 Y_RNA.430-201ENST00000384081 110 ntBASIC0.99□□□□□ -2.25
PCDH20Q8N6Y1 RNY1P6-201ENST00000384193 109 ntBASIC0.99□□□□□ -2.25
PCDH20Q8N6Y1 SNORA20-201ENST00000384662 132 ntBASIC0.99□□□□□ -2.25
PCDH20Q8N6Y1 RNU6-205P-201ENST00000390858 107 ntBASIC0.99□□□□□ -2.25
PCDH20Q8N6Y1 SNORD111-201ENST00000408139 94 ntBASIC0.99□□□□□ -2.25
PCDH20Q8N6Y1 RNA5SP247-201ENST00000411181 105 ntBASIC0.99□□□□□ -2.25
PCDH20Q8N6Y1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
PCDH20Q8N6Y1 RNU2-60P-201ENST00000517290 128 ntBASIC0.99□□□□□ -2.25
PCDH20Q8N6Y1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.99□□□□□ -2.25
PCDH20Q8N6Y1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
PCDH20Q8N6Y1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
PCDH20Q8N6Y1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
PCDH20Q8N6Y1 Y_RNA.191-201ENST00000363972 113 ntBASIC0.98□□□□□ -2.25
PCDH20Q8N6Y1 RNU6-580P-201ENST00000365159 107 ntBASIC0.98□□□□□ -2.25
PCDH20Q8N6Y1 Y_RNA.354-201ENST00000365448 111 ntBASIC0.98□□□□□ -2.25
PCDH20Q8N6Y1 RNU6-209P-201ENST00000384118 107 ntBASIC0.98□□□□□ -2.25
PCDH20Q8N6Y1 MIR200A-201ENST00000384875 90 ntBASIC0.98□□□□□ -2.25
PCDH20Q8N6Y1 MIR548I1-201ENST00000408810 149 ntBASIC0.98□□□□□ -2.25
PCDH20Q8N6Y1 RNU7-197P-201ENST00000458836 62 ntBASIC0.98□□□□□ -2.25
PCDH20Q8N6Y1 RNU6-113P-201ENST00000516653 101 ntBASIC0.98□□□□□ -2.25
PCDH20Q8N6Y1 RNU6-1212P-201ENST00000517023 104 ntBASIC0.98□□□□□ -2.25
PCDH20Q8N6Y1 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
PCDH20Q8N6Y1 AC021753.1-201ENST00000635724 168 ntBASIC0.98□□□□□ -2.25
PCDH20Q8N6Y1 MIR6841-201ENST00000637129 72 ntBASIC0.98□□□□□ -2.25
PCDH20Q8N6Y1 MIR6767-201ENST00000637302 66 ntBASIC0.98□□□□□ -2.25
PCDH20Q8N6Y1 Y_RNA.120-201ENST00000363304 110 ntBASIC0.97□□□□□ -2.25
PCDH20Q8N6Y1 RNU4-16P-201ENST00000364737 141 ntBASIC0.97□□□□□ -2.25
PCDH20Q8N6Y1 SNORD18B-201ENST00000365659 72 ntBASIC0.97□□□□□ -2.25
PCDH20Q8N6Y1 MIR532-201ENST00000385025 91 ntBASIC0.97□□□□□ -2.25
PCDH20Q8N6Y1 MIR513C-201ENST00000401352 84 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 215.5 ms